RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 MAGEA12P43365 314 aa0.91□□□□□ -2.26
USP44-207ENST00000552237 CARD18P57730 90 aa0.91□□□□□ -2.26
USP44-207ENST00000552237 C1QTNF8P60827 252 aa0.91□□□□□ -2.26
USP44-207ENST00000552237 UAP1Q16222 522 aaPredicted RBP0.91□□□□□ -2.26
USP44-207ENST00000552237 C18orf21Q32NC0 220 aaPredicted RBP0.91□□□□□ -2.26
USP44-207ENST00000552237 CENPWQ5EE01 88 aa0.91□□□□□ -2.26
USP44-207ENST00000552237 LRRC6Q86X45 466 aa0.91□□□□□ -2.26
USP44-207ENST00000552237 ST13P4Q8IZP2 240 aaPredicted RBP0.91□□□□□ -2.26
USP44-207ENST00000552237 ZNF283Q8N7M2 679 aa0.91□□□□□ -2.26
USP44-207ENST00000552237 OR2Y1Q8NGV0 311 aa0.91□□□□□ -2.26
USP44-207ENST00000552237 ANGPTL6Q8NI99 470 aa0.91□□□□□ -2.26
USP44-207ENST00000552237 TMIGD2Q96BF3 282 aa0.91□□□□□ -2.26
USP44-207ENST00000552237 MSANTD3Q96H12 275 aa0.91□□□□□ -2.26
USP44-207ENST00000552237 NAA38Q9BRA0 125 aaKnown RBP0.91□□□□□ -2.26
USP44-207ENST00000552237 ZNF426Q9BUY5 554 aa0.91□□□□□ -2.26
USP44-207ENST00000552237 RAB1BQ9H0U4 201 aa0.91□□□□□ -2.26
USP44-207ENST00000552237 GTSF1LQ9H1H1 148 aa0.91□□□□□ -2.26
USP44-207ENST00000552237 METTL17Q9H7H0 456 aaPredicted RBP0.91□□□□□ -2.26
USP44-207ENST00000552237 SNX24Q9Y343 169 aa0.91□□□□□ -2.26
USP44-207ENST00000552237 ARHGAP32A7KAX9 2087 aa0.9□□□□□ -2.26
USP44-207ENST00000552237 RP1L1Q8IWN7 2480 aaPredicted RBP0.9□□□□□ -2.27
USP44-207ENST00000552237 IGHV3-15A0A0B4J1V0 119 aa0.9□□□□□ -2.27
USP44-207ENST00000552237 LINC00862A6NCI5 91 aa0.9□□□□□ -2.27
USP44-207ENST00000552237 C11orf86A6NJI1 115 aa0.9□□□□□ -2.27
USP44-207ENST00000552237 EFCAB9A8MZ26 197 aa0.9□□□□□ -2.27
USP44-207ENST00000552237 H3BPC8 53 aa0.9□□□□□ -2.27
USP44-207ENST00000552237 ACTBP60709 375 aa0.9□□□□□ -2.27
USP44-207ENST00000552237 ACTG1P63261 375 aa0.9□□□□□ -2.27
USP44-207ENST00000552237 TMED1Q13445 227 aa0.9□□□□□ -2.27
USP44-207ENST00000552237 USF2Q15853 346 aaPredicted RBP0.9□□□□□ -2.27
USP44-207ENST00000552237 TRMT12Q53H54 448 aaKnown RBP0.9□□□□□ -2.27
USP44-207ENST00000552237 OR10J3Q5JRS4 329 aa0.9□□□□□ -2.27
USP44-207ENST00000552237 TIMM23BQ5SRD1 257 aa0.9□□□□□ -2.27
USP44-207ENST00000552237 C2orf91Q6ZV80 131 aa0.9□□□□□ -2.27
USP44-207ENST00000552237 MRPL52Q86TS9 123 aaKnown RBP0.9□□□□□ -2.27
USP44-207ENST00000552237 ATP6V1C2Q8NEY4 427 aa0.9□□□□□ -2.27
USP44-207ENST00000552237 FGF13Q92913 245 aa0.9□□□□□ -2.27
USP44-207ENST00000552237 CFAP53Q96M91 514 aa0.9□□□□□ -2.27
USP44-207ENST00000552237 HSPB9Q9BQS6 159 aa0.9□□□□□ -2.27
USP44-207ENST00000552237 CHMP4BQ9H444 224 aaKnown RBP0.9□□□□□ -2.27
USP44-207ENST00000552237 COMMD9Q9P000 198 aa0.9□□□□□ -2.27
USP44-207ENST00000552237 TMEM216Q9P0N5 145 aa0.9□□□□□ -2.27
USP44-207ENST00000552237 DOK5Q9P104 306 aa0.9□□□□□ -2.27
USP44-207ENST00000552237 DNAJC12Q9UKB3 198 aa0.9□□□□□ -2.27
USP44-207ENST00000552237 SNX12Q9UMY4 172 aa0.9□□□□□ -2.27
USP44-207ENST00000552237 PUS1Q9Y606 427 aaKnown RBP eCLIP0.9□□□□□ -2.27
USP44-207ENST00000552237 KDM5BQ9UGL1 1544 aa0.89□□□□□ -2.27
USP44-207ENST00000552237 NDUFS8O00217 210 aa0.89□□□□□ -2.27
USP44-207ENST00000552237 GPR171O14626 319 aa0.89□□□□□ -2.27
USP44-207ENST00000552237 GNRH2O43555 120 aa0.89□□□□□ -2.27
USP44-207ENST00000552237 LDOC1O95751 146 aaPredicted RBP0.89□□□□□ -2.27
USP44-207ENST00000552237 CRHBPP24387 322 aa0.89□□□□□ -2.27
USP44-207ENST00000552237 PSMB3P49720 205 aa0.89□□□□□ -2.27
USP44-207ENST00000552237 RAP1GDS1P52306 607 aa0.89□□□□□ -2.27
USP44-207ENST00000552237 TSPEAR-AS2P59090 65 aa0.89□□□□□ -2.27
USP44-207ENST00000552237 KRTAP10-4P60372 401 aaPredicted RBP0.89□□□□□ -2.27
USP44-207ENST00000552237 ERHP84090 104 aaKnown RBP0.89□□□□□ -2.27
USP44-207ENST00000552237 FLOT2Q14254 428 aa0.89□□□□□ -2.27
USP44-207ENST00000552237 EXOC3L4Q17RC7 722 aa0.89□□□□□ -2.27
USP44-207ENST00000552237 FBXO48Q5FWF7 155 aa0.89□□□□□ -2.27
USP44-207ENST00000552237 COA5Q86WW8 74 aa0.89□□□□□ -2.27
USP44-207ENST00000552237 CCDC12Q8WUD4 166 aaPredicted RBP0.89□□□□□ -2.27
USP44-207ENST00000552237 TMEM239Q8WW34 195 aa0.89□□□□□ -2.27
USP44-207ENST00000552237 SIKE1Q9BRV8 207 aa0.89□□□□□ -2.27
USP44-207ENST00000552237 ZNF471Q9BX82 626 aaPredicted RBP0.89□□□□□ -2.27
USP44-207ENST00000552237 C11orf1Q9H5F2 150 aa0.89□□□□□ -2.27
USP44-207ENST00000552237 MAT2BQ9NZL9 334 aa0.89□□□□□ -2.27
USP44-207ENST00000552237 PRO2289Q9P1D8 64 aa0.89□□□□□ -2.27
USP44-207ENST00000552237 MRPS16Q9Y3D3 137 aaKnown RBP0.89□□□□□ -2.27
USP44-207ENST00000552237 PLCH2O75038 1416 aa0.89□□□□□ -2.27
USP44-207ENST00000552237 SLX4Q8IY92 1834 aa0.88□□□□□ -2.27
USP44-207ENST00000552237 ERICH2A1L162 156 aa0.88□□□□□ -2.27
USP44-207ENST00000552237 GRIFINA4D1Z8 144 aa0.88□□□□□ -2.27
USP44-207ENST00000552237 TMEM235A6NFC5 223 aa0.88□□□□□ -2.27
USP44-207ENST00000552237 ZNF879B4DU55 563 aa0.88□□□□□ -2.27
USP44-207ENST00000552237 PHYHO14832 338 aa0.88□□□□□ -2.27
USP44-207ENST00000552237 LIN7AO14910 233 aaPredicted RBP0.88□□□□□ -2.27
USP44-207ENST00000552237 NQO2P16083 231 aa0.88□□□□□ -2.27
USP44-207ENST00000552237 ATP6V0CP27449 155 aa0.88□□□□□ -2.27
USP44-207ENST00000552237 RPL14P50914 215 aaKnown RBP0.88□□□□□ -2.27
USP44-207ENST00000552237 OR10A3P58181 314 aa0.88□□□□□ -2.27
USP44-207ENST00000552237 ZNF90Q03938 601 aa0.88□□□□□ -2.27
USP44-207ENST00000552237 TTC33Q6PID6 262 aaPredicted RBP0.88□□□□□ -2.27
USP44-207ENST00000552237 Q6ZTI0 123 aa0.88□□□□□ -2.27
USP44-207ENST00000552237 MTERF4Q7Z6M4 381 aaKnown RBP0.88□□□□□ -2.27
USP44-207ENST00000552237 TMEM75Q8N9X5 138 aa0.88□□□□□ -2.27
USP44-207ENST00000552237 OR4P4Q8NGL7 312 aa0.88□□□□□ -2.27
USP44-207ENST00000552237 OR5K1Q8NHB7 308 aa0.88□□□□□ -2.27
USP44-207ENST00000552237 SPACA4Q8TDM5 124 aa0.88□□□□□ -2.27
USP44-207ENST00000552237 LRRC45Q96CN5 670 aa0.88□□□□□ -2.27
USP44-207ENST00000552237 TBX5Q99593 518 aa0.88□□□□□ -2.27
USP44-207ENST00000552237 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.88□□□□□ -2.27
USP44-207ENST00000552237 MDC1Q14676 2089 aaKnown RBP0.88□□□□□ -2.27
USP44-207ENST00000552237 A0A1B0GX12 115 aa0.87□□□□□ -2.27
USP44-207ENST00000552237 C2orf74A8MZ97 194 aa0.87□□□□□ -2.27
USP44-207ENST00000552237 ZW10O43264 779 aa0.87□□□□□ -2.27
USP44-207ENST00000552237 NEMFO60524 1076 aa0.87□□□□□ -2.27
USP44-207ENST00000552237 FADS2O95864 444 aaKnown RBP0.87□□□□□ -2.27
USP44-207ENST00000552237 CST4P01036 141 aa0.87□□□□□ -2.27
USP44-207ENST00000552237 IVLP07476 585 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms