RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 DNAJC12Q9UKB3 198 aa0.83□□□□□ -2.28
CCDC38-206ENST00000548771 NCKAP5O14513 1909 aa0.83□□□□□ -2.28
CCDC38-206ENST00000548771 COL4A1P02462 1669 aa0.82□□□□□ -2.28
CCDC38-206ENST00000548771 IGHV3-15A0A0B4J1V0 119 aa0.82□□□□□ -2.28
CCDC38-206ENST00000548771 C11orf86A6NJI1 115 aa0.82□□□□□ -2.28
CCDC38-206ENST00000548771 UBFD1O14562 309 aaKnown RBP0.82□□□□□ -2.28
CCDC38-206ENST00000548771 LDOC1O95751 146 aaPredicted RBP0.82□□□□□ -2.28
CCDC38-206ENST00000548771 CCDC172P0C7W6 258 aa0.82□□□□□ -2.28
CCDC38-206ENST00000548771 ESDP10768 282 aa0.82□□□□□ -2.28
CCDC38-206ENST00000548771 TSPEAR-AS2P59090 65 aa0.82□□□□□ -2.28
CCDC38-206ENST00000548771 UAP1Q16222 522 aaPredicted RBP0.82□□□□□ -2.28
CCDC38-206ENST00000548771 TRMT12Q53H54 448 aaKnown RBP0.82□□□□□ -2.28
CCDC38-206ENST00000548771 TTC33Q6PID6 262 aaPredicted RBP0.82□□□□□ -2.28
CCDC38-206ENST00000548771 MTERF4Q7Z6M4 381 aaKnown RBP0.82□□□□□ -2.28
CCDC38-206ENST00000548771 ZNF283Q8N7M2 679 aa0.82□□□□□ -2.28
CCDC38-206ENST00000548771 OR4P4Q8NGL7 312 aa0.82□□□□□ -2.28
CCDC38-206ENST00000548771 OR5K1Q8NHB7 308 aa0.82□□□□□ -2.28
CCDC38-206ENST00000548771 FGF13Q92913 245 aa0.82□□□□□ -2.28
CCDC38-206ENST00000548771 NAA38Q9BRA0 125 aaKnown RBP0.82□□□□□ -2.28
CCDC38-206ENST00000548771 UPK3BQ9BT76 320 aa0.82□□□□□ -2.28
CCDC38-206ENST00000548771 TIMM21Q9BVV7 248 aa0.82□□□□□ -2.28
CCDC38-206ENST00000548771 COMMD9Q9P000 198 aa0.82□□□□□ -2.28
CCDC38-206ENST00000548771 DOK5Q9P104 306 aa0.82□□□□□ -2.28
CCDC38-206ENST00000548771 SNX12Q9UMY4 172 aa0.82□□□□□ -2.28
CCDC38-206ENST00000548771 RAB3GAP2Q9H2M9 1393 aa0.82□□□□□ -2.28
CCDC38-206ENST00000548771 TNIKQ9UKE5 1360 aa0.82□□□□□ -2.28
CCDC38-206ENST00000548771 MDC1Q14676 2089 aaKnown RBP0.81□□□□□ -2.28
CCDC38-206ENST00000548771 IGKV1D-43A0A0B4J1Z2 117 aa0.81□□□□□ -2.28
CCDC38-206ENST00000548771 A0A1B0GVG6 124 aa0.81□□□□□ -2.28
CCDC38-206ENST00000548771 GRIFINA4D1Z8 144 aa0.81□□□□□ -2.28
CCDC38-206ENST00000548771 LINC00862A6NCI5 91 aa0.81□□□□□ -2.28
CCDC38-206ENST00000548771 GPR171O14626 319 aa0.81□□□□□ -2.28
CCDC38-206ENST00000548771 GNRH2O43555 120 aa0.81□□□□□ -2.28
CCDC38-206ENST00000548771 STK16O75716 305 aa0.81□□□□□ -2.28
CCDC38-206ENST00000548771 NAPSAO96009 420 aa0.81□□□□□ -2.28
CCDC38-206ENST00000548771 NQO2P16083 231 aa0.81□□□□□ -2.28
CCDC38-206ENST00000548771 ATP6V0CP27449 155 aa0.81□□□□□ -2.28
CCDC38-206ENST00000548771 PSMB3P49720 205 aa0.81□□□□□ -2.28
CCDC38-206ENST00000548771 RAP1GDS1P52306 607 aa0.81□□□□□ -2.28
CCDC38-206ENST00000548771 GTF2BQ00403 316 aa0.81□□□□□ -2.28
CCDC38-206ENST00000548771 RAB31Q13636 194 aa0.81□□□□□ -2.28
CCDC38-206ENST00000548771 TPRXLQ17RH7 258 aa0.81□□□□□ -2.28
CCDC38-206ENST00000548771 Q6ZRN7 208 aaPredicted RBP0.81□□□□□ -2.28
CCDC38-206ENST00000548771 CCDC127Q96BQ5 260 aa0.81□□□□□ -2.28
CCDC38-206ENST00000548771 MSANTD3Q96H12 275 aa0.81□□□□□ -2.28
CCDC38-206ENST00000548771 ZNF426Q9BUY5 554 aa0.81□□□□□ -2.28
CCDC38-206ENST00000548771 MAT2BQ9NZL9 334 aa0.81□□□□□ -2.28
CCDC38-206ENST00000548771 ATAD5Q96QE3 1844 aa0.8□□□□□ -2.28
CCDC38-206ENST00000548771 MYO5BQ9ULV0 1848 aa0.8□□□□□ -2.28
CCDC38-206ENST00000548771 MYO15BQ96JP2 1530 aa0.8□□□□□ -2.28
CCDC38-206ENST00000548771 NYNRINQ9P2P1 1898 aaKnown RBP0.8□□□□□ -2.28
CCDC38-206ENST00000548771 A0A1B0GX12 115 aa0.8□□□□□ -2.28
CCDC38-206ENST00000548771 TMEM235A6NFC5 223 aa0.8□□□□□ -2.28
CCDC38-206ENST00000548771 CST4P01036 141 aa0.8□□□□□ -2.28
CCDC38-206ENST00000548771 LYNX1P0DP58 116 aa0.8□□□□□ -2.28
CCDC38-206ENST00000548771 CCL2P13500 99 aa0.8□□□□□ -2.28
CCDC38-206ENST00000548771 CRHBPP24387 322 aa0.8□□□□□ -2.28
CCDC38-206ENST00000548771 MAGEA12P43365 314 aa0.8□□□□□ -2.28
CCDC38-206ENST00000548771 OR1E2P47887 323 aa0.8□□□□□ -2.28
CCDC38-206ENST00000548771 OR10A3P58181 314 aa0.8□□□□□ -2.28
CCDC38-206ENST00000548771 ERHP84090 104 aaKnown RBP0.8□□□□□ -2.28
CCDC38-206ENST00000548771 XRCC4Q13426 336 aa0.8□□□□□ -2.28
CCDC38-206ENST00000548771 Q6ZTI0 123 aa0.8□□□□□ -2.28
CCDC38-206ENST00000548771 COA5Q86WW8 74 aa0.8□□□□□ -2.28
CCDC38-206ENST00000548771 TMEM75Q8N9X5 138 aa0.8□□□□□ -2.28
CCDC38-206ENST00000548771 LHFPL5Q8TAF8 219 aa0.8□□□□□ -2.28
CCDC38-206ENST00000548771 FNDC9Q8TBE3 224 aa0.8□□□□□ -2.28
CCDC38-206ENST00000548771 TMIGD2Q96BF3 282 aa0.8□□□□□ -2.28
CCDC38-206ENST00000548771 CCDC124Q96CT7 223 aaKnown RBP0.8□□□□□ -2.28
CCDC38-206ENST00000548771 ABHD14BQ96IU4 210 aa0.8□□□□□ -2.28
CCDC38-206ENST00000548771 TRNT1Q96Q11 434 aaKnown RBP0.8□□□□□ -2.28
CCDC38-206ENST00000548771 HSPB9Q9BQS6 159 aa0.8□□□□□ -2.28
CCDC38-206ENST00000548771 ZNF471Q9BX82 626 aaPredicted RBP0.8□□□□□ -2.28
CCDC38-206ENST00000548771 CHST5Q9GZS9 411 aa0.8□□□□□ -2.28
CCDC38-206ENST00000548771 C11orf1Q9H5F2 150 aa0.8□□□□□ -2.28
CCDC38-206ENST00000548771 PRO2289Q9P1D8 64 aa0.8□□□□□ -2.28
CCDC38-206ENST00000548771 MRM2Q9UI43 246 aaKnown RBP0.8□□□□□ -2.28
CCDC38-206ENST00000548771 LINC00527Q9UJ94 153 aa0.8□□□□□ -2.28
CCDC38-206ENST00000548771 ENPP5Q9UJA9 477 aa0.8□□□□□ -2.28
CCDC38-206ENST00000548771 MRPS16Q9Y3D3 137 aaKnown RBP0.8□□□□□ -2.28
CCDC38-206ENST00000548771 ARHGAP32A7KAX9 2087 aa0.8□□□□□ -2.28
CCDC38-206ENST00000548771 DENND4BO75064 1496 aaPredicted RBP0.8□□□□□ -2.28
CCDC38-206ENST00000548771 MED13Q9UHV7 2174 aa0.79□□□□□ -2.28
CCDC38-206ENST00000548771 C2orf74A8MZ97 194 aa0.79□□□□□ -2.28
CCDC38-206ENST00000548771 SULT1C2O00338 296 aa0.79□□□□□ -2.28
CCDC38-206ENST00000548771 ZW10O43264 779 aa0.79□□□□□ -2.28
CCDC38-206ENST00000548771 TNFAIP8O95379 198 aa0.79□□□□□ -2.28
CCDC38-206ENST00000548771 CDK2P24941 298 aa0.79□□□□□ -2.28
CCDC38-206ENST00000548771 PSMD7P51665 324 aa0.79□□□□□ -2.28
CCDC38-206ENST00000548771 ZNF90Q03938 601 aa0.79□□□□□ -2.28
CCDC38-206ENST00000548771 HSP90B2PQ58FF3 399 aa0.79□□□□□ -2.28
CCDC38-206ENST00000548771 C2orf91Q6ZV80 131 aa0.79□□□□□ -2.28
CCDC38-206ENST00000548771 LRRC28Q86X40 367 aaPredicted RBP0.79□□□□□ -2.28
CCDC38-206ENST00000548771 CCDC112Q8NEF3 446 aa0.79□□□□□ -2.28
CCDC38-206ENST00000548771 CCDC12Q8WUD4 166 aaPredicted RBP0.79□□□□□ -2.28
CCDC38-206ENST00000548771 TBX5Q99593 518 aa0.79□□□□□ -2.28
CCDC38-206ENST00000548771 MIEN1Q9BRT3 115 aa0.79□□□□□ -2.28
CCDC38-206ENST00000548771 DNMT1P26358 1616 aaKnown RBP0.78□□□□□ -2.28
CCDC38-206ENST00000548771 M0QYV0 167 aa0.78□□□□□ -2.28
CCDC38-206ENST00000548771 PHYHO14832 338 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms