RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 TCTEX1D4Q5JR98 221 aa12.06□□□□□ -0.48
COL27A1-206ENST00000490831 HES5Q5TA89 166 aa12.06□□□□□ -0.48
COL27A1-206ENST00000490831 ZNF773Q6PK81 442 aa12.06□□□□□ -0.48
COL27A1-206ENST00000490831 ODF3L1Q8IXM7 274 aa12.06□□□□□ -0.48
COL27A1-206ENST00000490831 PECRQ9BY49 303 aa12.06□□□□□ -0.48
COL27A1-206ENST00000490831 PLSCR3Q9NRY6 295 aa12.06□□□□□ -0.48
COL27A1-206ENST00000490831 ABRACLQ9P1F3 81 aa12.06□□□□□ -0.48
COL27A1-206ENST00000490831 AK3Q9UIJ7 227 aa12.06□□□□□ -0.48
COL27A1-206ENST00000490831 MGAT4AQ9UM21 535 aa12.06□□□□□ -0.48
COL27A1-206ENST00000490831 RRP15Q9Y3B9 282 aaKnown RBP12.06□□□□□ -0.48
COL27A1-206ENST00000490831 ITGB1BP1O14713 200 aa12.05□□□□□ -0.48
COL27A1-206ENST00000490831 MOSP00540 346 aa12.05□□□□□ -0.48
COL27A1-206ENST00000490831 IGHG2P01859 326 aa12.05□□□□□ -0.48
COL27A1-206ENST00000490831 RAB3BP20337 219 aa12.05□□□□□ -0.48
COL27A1-206ENST00000490831 PSMB9P28065 219 aa12.05□□□□□ -0.48
COL27A1-206ENST00000490831 VEGFCP49767 419 aa12.05□□□□□ -0.48
COL27A1-206ENST00000490831 PLA2G7Q13093 441 aa12.05□□□□□ -0.48
COL27A1-206ENST00000490831 PLAC9Q5JTB6 97 aa12.05□□□□□ -0.48
COL27A1-206ENST00000490831 C22orf42Q6IC83 251 aa12.05□□□□□ -0.48
COL27A1-206ENST00000490831 CENPVQ7Z7K6 275 aaPredicted RBP12.05□□□□□ -0.48
COL27A1-206ENST00000490831 NR2C2APQ86WQ0 139 aa12.05□□□□□ -0.48
COL27A1-206ENST00000490831 LYG1Q8N1E2 194 aa12.05□□□□□ -0.48
COL27A1-206ENST00000490831 Q8N9W7 124 aa12.05□□□□□ -0.48
COL27A1-206ENST00000490831 OR8H1Q8NGG4 311 aa12.05□□□□□ -0.48
COL27A1-206ENST00000490831 ARHGAP5-AS1Q96IT6 56 aa12.05□□□□□ -0.48
COL27A1-206ENST00000490831 HDHD3Q9BSH5 251 aaPredicted RBP12.05□□□□□ -0.48
COL27A1-206ENST00000490831 CHMP1AQ9HD42 196 aaPredicted RBP12.05□□□□□ -0.48
COL27A1-206ENST00000490831 Q9N2K0 584 aa12.05□□□□□ -0.48
COL27A1-206ENST00000490831 C12orf4Q9NQ89 552 aa12.05□□□□□ -0.48
COL27A1-206ENST00000490831 ZNF736B4DX44 427 aaPredicted RBP12.04□□□□□ -0.48
COL27A1-206ENST00000490831 WIPF1O43516 503 aa12.04□□□□□ -0.48
COL27A1-206ENST00000490831 RAB6AP20340 208 aa12.04□□□□□ -0.48
COL27A1-206ENST00000490831 LSAMPQ13449 338 aa12.04□□□□□ -0.48
COL27A1-206ENST00000490831 NSUN5P1Q3KNT7 163 aa12.04□□□□□ -0.48
COL27A1-206ENST00000490831 KCTD21Q4G0X4 260 aa12.04□□□□□ -0.48
COL27A1-206ENST00000490831 C9orf152Q5JTZ5 239 aa12.04□□□□□ -0.48
COL27A1-206ENST00000490831 FAM71F2Q6NXP2 309 aa12.04□□□□□ -0.48
COL27A1-206ENST00000490831 ZNF833PQ6ZTB9 187 aa12.04□□□□□ -0.48
COL27A1-206ENST00000490831 OR4F17Q8NGA8 305 aa12.04□□□□□ -0.48
COL27A1-206ENST00000490831 PTX4Q96A99 478 aa12.04□□□□□ -0.48
COL27A1-206ENST00000490831 OR4F4Q96R69 305 aa12.04□□□□□ -0.48
COL27A1-206ENST00000490831 IFI27L2Q9H2X8 130 aa12.04□□□□□ -0.48
COL27A1-206ENST00000490831 LIN7CQ9NUP9 197 aaKnown RBP12.04□□□□□ -0.48
COL27A1-206ENST00000490831 TXNL4BQ9NX01 149 aaKnown RBP12.04□□□□□ -0.48
COL27A1-206ENST00000490831 STUB1Q9UNE7 303 aa12.04□□□□□ -0.48
COL27A1-206ENST00000490831 KCNK7Q9Y2U2 307 aa12.04□□□□□ -0.48
COL27A1-206ENST00000490831 KCNAB3O43448 404 aa12.03□□□□□ -0.48
COL27A1-206ENST00000490831 HLA-DRB3P79483 266 aa12.03□□□□□ -0.48
COL27A1-206ENST00000490831 DEFA6Q01524 100 aa12.03□□□□□ -0.48
COL27A1-206ENST00000490831 C10orf99Q6UWK7 81 aa12.03□□□□□ -0.48
COL27A1-206ENST00000490831 FAM71E2Q8N5Q1 922 aa12.03□□□□□ -0.48
COL27A1-206ENST00000490831 OR2AK2Q8NG84 335 aa12.03□□□□□ -0.48
COL27A1-206ENST00000490831 OR4X2Q8NGF9 303 aa12.03□□□□□ -0.48
COL27A1-206ENST00000490831 IL1F10Q8WWZ1 152 aa12.03□□□□□ -0.48
COL27A1-206ENST00000490831 NABP2Q9BQ15 211 aa12.03□□□□□ -0.48
COL27A1-206ENST00000490831 CMSS1Q9BQ75 279 aaKnown RBP12.03□□□□□ -0.48
COL27A1-206ENST00000490831 ABCG5Q9H222 651 aa12.03□□□□□ -0.48
COL27A1-206ENST00000490831 TSSC4Q9Y5U2 329 aaPredicted RBP12.03□□□□□ -0.48
COL27A1-206ENST00000490831 RAB27BO00194 218 aa12.02□□□□□ -0.49
COL27A1-206ENST00000490831 MOGAT2Q3SYC2 334 aa12.02□□□□□ -0.49
COL27A1-206ENST00000490831 SLC35E3Q7Z769 313 aa12.02□□□□□ -0.49
COL27A1-206ENST00000490831 TPRA1Q86W33 373 aa12.02□□□□□ -0.49
COL27A1-206ENST00000490831 OR10R2Q8NGX6 335 aa12.02□□□□□ -0.49
COL27A1-206ENST00000490831 CHPT1Q8WUD6 406 aa12.02□□□□□ -0.49
COL27A1-206ENST00000490831 R3HDM4Q96D70 268 aa12.02□□□□□ -0.49
COL27A1-206ENST00000490831 RAB3CQ96E17 227 aa12.02□□□□□ -0.49
COL27A1-206ENST00000490831 S1PR3Q99500 378 aa12.02□□□□□ -0.49
COL27A1-206ENST00000490831 ZNF251Q9BRH9 671 aa12.02□□□□□ -0.49
COL27A1-206ENST00000490831 AGMATQ9BSE5 352 aa12.02□□□□□ -0.49
COL27A1-206ENST00000490831 MRPL20Q9BYC9 149 aaKnown RBP12.02□□□□□ -0.49
COL27A1-206ENST00000490831 GHITMQ9H3K2 345 aa12.02□□□□□ -0.49
COL27A1-206ENST00000490831 SLC23A1Q9UHI7 598 aa12.02□□□□□ -0.49
COL27A1-206ENST00000490831 PLXNB1O43157 2135 aa12.02□□□□□ -0.49
COL27A1-206ENST00000490831 SAA2-SAA4A0A096LPE2 208 aa12.01□□□□□ -0.49
COL27A1-206ENST00000490831 TCRBV4S1A1TA0A5B7 111 aa12.01□□□□□ -0.49
COL27A1-206ENST00000490831 PSMB11A5LHX3 300 aa12.01□□□□□ -0.49
COL27A1-206ENST00000490831 NCBP2LA6PVI3 153 aaKnown RBP12.01□□□□□ -0.49
COL27A1-206ENST00000490831 NOTOA8MTQ0 251 aa12.01□□□□□ -0.49
COL27A1-206ENST00000490831 MFNGO00587 321 aa12.01□□□□□ -0.49
COL27A1-206ENST00000490831 SAA2P0DJI9 122 aaPredicted RBP12.01□□□□□ -0.49
COL27A1-206ENST00000490831 GPR12P47775 334 aa12.01□□□□□ -0.49
COL27A1-206ENST00000490831 OR3A3P47888 321 aa12.01□□□□□ -0.49
COL27A1-206ENST00000490831 F2RL1P55085 397 aa12.01□□□□□ -0.49
COL27A1-206ENST00000490831 SETD6Q8TBK2 473 aa12.01□□□□□ -0.49
COL27A1-206ENST00000490831 TOLLIPQ9H0E2 274 aa12.01□□□□□ -0.49
COL27A1-206ENST00000490831 PARP12Q9H0J9 701 aaKnown RBP12.01□□□□□ -0.49
COL27A1-206ENST00000490831 PIPOXQ9P0Z9 390 aa12.01□□□□□ -0.49
COL27A1-206ENST00000490831 ZNF580Q9UK33 172 aa12.01□□□□□ -0.49
COL27A1-206ENST00000490831 SSR3Q9UNL2 185 aa12.01□□□□□ -0.49
COL27A1-206ENST00000490831 NOTCH3Q9UM47 2321 aa12□□□□□ -0.49
COL27A1-206ENST00000490831 A0A0B4J203 849 aa12□□□□□ -0.49
COL27A1-206ENST00000490831 IGKV1-6A0A0C4DH72 117 aa12□□□□□ -0.49
COL27A1-206ENST00000490831 TRDCB7Z8K6 153 aa12□□□□□ -0.49
COL27A1-206ENST00000490831 RAB29O14966 203 aa12□□□□□ -0.49
COL27A1-206ENST00000490831 ST8SIA5O15466 376 aa12□□□□□ -0.49
COL27A1-206ENST00000490831 DIRAS3O95661 229 aa12□□□□□ -0.49
COL27A1-206ENST00000490831 SCTP09683 121 aa12□□□□□ -0.49
COL27A1-206ENST00000490831 HIST1H1DP16402 221 aaKnown RBP12□□□□□ -0.49
COL27A1-206ENST00000490831 ZBTB25P24278 435 aa12□□□□□ -0.49
COL27A1-206ENST00000490831 GADD45AP24522 165 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms