RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 VAMP2P63027 116 aa4.29□□□□□ -1.72
PTPRK-213ENST00000490332 NKX6-1P78426 367 aaPredicted RBP4.29□□□□□ -1.72
PTPRK-213ENST00000490332 FLI1Q01543 452 aaPredicted RBP4.29□□□□□ -1.72
PTPRK-213ENST00000490332 BAXQ07812 192 aa4.29□□□□□ -1.72
PTPRK-213ENST00000490332 MZT1Q08AG7 82 aa4.29□□□□□ -1.72
PTPRK-213ENST00000490332 ZNF266Q14584 549 aa4.29□□□□□ -1.72
PTPRK-213ENST00000490332 PIGYQ3MUY2 71 aa4.29□□□□□ -1.72
PTPRK-213ENST00000490332 PXDC1Q5TGL8 231 aa4.29□□□□□ -1.72
PTPRK-213ENST00000490332 TMEM268Q5VZI3 342 aa4.29□□□□□ -1.72
PTPRK-213ENST00000490332 RPL7L1Q6DKI1 246 aaKnown RBP4.29□□□□□ -1.72
PTPRK-213ENST00000490332 DHRS7BQ6IAN0 325 aaPredicted RBP4.29□□□□□ -1.72
PTPRK-213ENST00000490332 FIP1L1Q6UN15 594 aaKnown RBP4.29□□□□□ -1.72
PTPRK-213ENST00000490332 LINC00696Q6ZRV3 163 aa4.29□□□□□ -1.72
PTPRK-213ENST00000490332 P4HA3Q7Z4N8 544 aa4.29□□□□□ -1.72
PTPRK-213ENST00000490332 FAM58AQ8N1B3 248 aa4.29□□□□□ -1.72
PTPRK-213ENST00000490332 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.29□□□□□ -1.72
PTPRK-213ENST00000490332 ZBTB34Q8NCN2 500 aa4.29□□□□□ -1.72
PTPRK-213ENST00000490332 CLRN3Q8NCR9 226 aa4.29□□□□□ -1.72
PTPRK-213ENST00000490332 OR8G5Q8NG78 346 aa4.29□□□□□ -1.72
PTPRK-213ENST00000490332 LYPD6BQ8NI32 183 aa4.29□□□□□ -1.72
PTPRK-213ENST00000490332 NEK7Q8TDX7 302 aa4.29□□□□□ -1.72
PTPRK-213ENST00000490332 CA5BP1Q8WTZ4 195 aa4.29□□□□□ -1.72
PTPRK-213ENST00000490332 MSI2Q96DH6 328 aaKnown RBP4.29□□□□□ -1.72
PTPRK-213ENST00000490332 GNPNAT1Q96EK6 184 aaPredicted RBP4.29□□□□□ -1.72
PTPRK-213ENST00000490332 GMPPAQ96IJ6 420 aaPredicted RBP4.29□□□□□ -1.72
PTPRK-213ENST00000490332 BOD1Q96IK1 185 aa4.29□□□□□ -1.72
PTPRK-213ENST00000490332 SIGLEC12Q96PQ1 595 aa4.29□□□□□ -1.72
PTPRK-213ENST00000490332 HDHD3Q9BSH5 251 aaPredicted RBP4.29□□□□□ -1.72
PTPRK-213ENST00000490332 PBDC1Q9BVG4 233 aa4.29□□□□□ -1.72
PTPRK-213ENST00000490332 PLEKHF2Q9H8W4 249 aa4.29□□□□□ -1.72
PTPRK-213ENST00000490332 UNKLQ9H9P5 680 aaKnown RBP4.29□□□□□ -1.72
PTPRK-213ENST00000490332 CDH20Q9HBT6 801 aa4.29□□□□□ -1.72
PTPRK-213ENST00000490332 UQCC1Q9NVA1 299 aa4.29□□□□□ -1.72
PTPRK-213ENST00000490332 BEX4Q9NWD9 120 aaPredicted RBP4.29□□□□□ -1.72
PTPRK-213ENST00000490332 PLA2G3Q9NZ20 509 aa4.29□□□□□ -1.72
PTPRK-213ENST00000490332 PURGQ9UJV8 347 aaKnown RBP4.29□□□□□ -1.72
PTPRK-213ENST00000490332 AMDHD2Q9Y303 409 aa4.29□□□□□ -1.72
PTPRK-213ENST00000490332 KPTNQ9Y664 436 aa4.29□□□□□ -1.72
PTPRK-213ENST00000490332 ABCA1O95477 2261 aa4.29□□□□□ -1.72
PTPRK-213ENST00000490332 USF3Q68DE3 2245 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 A0A1B0GU03 582 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 MSGN1A6NI15 193 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 SLC22A20A6NK97 555 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 TMEM210A6NLX4 147 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 NPIPB11E5RHQ5 1161 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 H0Y980 276 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 J3QT63 122 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 DNASE2O00115 360 aaPredicted RBP4.28□□□□□ -1.72
PTPRK-213ENST00000490332 WRBO00258 174 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 SH2D1BO14796 132 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 SMAD7O15105 426 aaKnown RBP4.28□□□□□ -1.72
PTPRK-213ENST00000490332 TSPAN9O75954 239 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 DFFBO76075 338 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 SCGB1D2O95969 90 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 IGHV3-9P01782 118 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 DANCRP0C864 163 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 SPP1P10451 314 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 RAC2P15153 192 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 PRKACAP17612 351 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 BCL3P20749 454 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 UCP1P25874 307 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 GNRHRP30968 328 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 NKX2-1P43699 371 aaPredicted RBP4.28□□□□□ -1.72
PTPRK-213ENST00000490332 NPBWR2P48146 333 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 GPM6AP51674 278 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 UBE2NP61088 152 aaKnown RBP4.28□□□□□ -1.72
PTPRK-213ENST00000490332 RPL23AP62750 156 aaKnown RBP4.28□□□□□ -1.72
PTPRK-213ENST00000490332 ARG2P78540 354 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 DEFA6Q01524 100 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 CDSNQ15517 529 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 OR8G1Q15617 311 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 MSMO1Q15800 293 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 GABRA6Q16445 453 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 MST1LQ2TV78 715 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 PHLDA2Q53GA4 152 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 ZNF766Q5HY98 468 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 DMRTC1Q5HYR2 192 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 SPIN3Q5JUX0 258 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 OR2A2Q6IF42 318 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 ZNF880Q6PDB4 577 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 HAGHLQ6PII5 290 aaPredicted RBP4.28□□□□□ -1.72
PTPRK-213ENST00000490332 DPPA3Q6W0C5 159 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 LYZL2Q7Z4W2 148 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 RTN4RL2Q86UN3 420 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 CALHM1Q8IU99 346 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 FOXRED2Q8IWF2 684 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 SELENOHQ8IZQ5 122 aaKnown RBP4.28□□□□□ -1.72
PTPRK-213ENST00000490332 OR2C3Q8N628 320 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 TCTEX1D1Q8N7M0 179 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 SUMF2Q8NBJ7 301 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 BHLHE23Q8NDY6 225 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 OR5D13Q8NGL4 314 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 OR4D5Q8NGN0 318 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 OR10J5Q8NHC4 309 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 SLAMF9Q96A28 289 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 WDYHV1Q96HA8 205 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 RAB40CQ96S21 281 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 C1QTNF6Q9BXI9 259 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 OR51I2Q9H344 312 aa4.28□□□□□ -1.72
PTPRK-213ENST00000490332 HRH4Q9H3N8 390 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms