RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 CALRP27797 417 aaKnown RBP18.51■□□□□ 0.55
C9orf3-215ENST00000478473 TMEM50BP56557 158 aa18.51■□□□□ 0.55
C9orf3-215ENST00000478473 GNMTQ14749 295 aa18.51■□□□□ 0.55
C9orf3-215ENST00000478473 ABHD14AQ9BUJ0 271 aa18.51■□□□□ 0.55
C9orf3-215ENST00000478473 PLEKHJ1Q9NW61 149 aa18.51■□□□□ 0.55
C9orf3-215ENST00000478473 NDUFB11Q9NX14 153 aa18.51■□□□□ 0.55
C9orf3-215ENST00000478473 V9GY05 133 aa18.51■□□□□ 0.55
C9orf3-215ENST00000478473 TGP01266 2768 aa18.5■□□□□ 0.55
C9orf3-215ENST00000478473 PSMB11A5LHX3 300 aa18.5■□□□□ 0.55
C9orf3-215ENST00000478473 ZNF736B4DX44 427 aaPredicted RBP18.5■□□□□ 0.55
C9orf3-215ENST00000478473 ITGB1BP1O14713 200 aa18.5■□□□□ 0.55
C9orf3-215ENST00000478473 SOCS1O15524 211 aa18.5■□□□□ 0.55
C9orf3-215ENST00000478473 LSAMPQ13449 338 aa18.5■□□□□ 0.55
C9orf3-215ENST00000478473 RAB11BQ15907 218 aa18.5■□□□□ 0.55
C9orf3-215ENST00000478473 C5orf24Q7Z6I8 188 aa18.5■□□□□ 0.55
C9orf3-215ENST00000478473 C1QL4Q86Z23 238 aa18.5■□□□□ 0.55
C9orf3-215ENST00000478473 FAM71E2Q8N5Q1 922 aa18.5■□□□□ 0.55
C9orf3-215ENST00000478473 COMMD1Q8N668 190 aa18.5■□□□□ 0.55
C9orf3-215ENST00000478473 FAM3DQ96BQ1 224 aa18.5■□□□□ 0.55
C9orf3-215ENST00000478473 ZNF580Q9UK33 172 aa18.5■□□□□ 0.55
C9orf3-215ENST00000478473 DENRO43583 198 aaKnown RBP18.49■□□□□ 0.55
C9orf3-215ENST00000478473 PPP1CCP36873 323 aaKnown RBP18.49■□□□□ 0.55
C9orf3-215ENST00000478473 P2RY14Q15391 338 aa18.49■□□□□ 0.55
C9orf3-215ENST00000478473 FAM71F2Q6NXP2 309 aa18.49■□□□□ 0.55
C9orf3-215ENST00000478473 ZNF833PQ6ZTB9 187 aa18.49■□□□□ 0.55
C9orf3-215ENST00000478473 SLC35E3Q7Z769 313 aa18.49■□□□□ 0.55
C9orf3-215ENST00000478473 OR51D1Q8NGF3 324 aa18.49■□□□□ 0.55
C9orf3-215ENST00000478473 S1PR3Q99500 378 aa18.49■□□□□ 0.55
C9orf3-215ENST00000478473 ABRACLQ9P1F3 81 aa18.49■□□□□ 0.55
C9orf3-215ENST00000478473 TRDV1A0A1B0GX56 115 aa18.48■□□□□ 0.55
C9orf3-215ENST00000478473 C2orf76Q3KRA6 126 aa18.48■□□□□ 0.55
C9orf3-215ENST00000478473 UBE2UQ5VVX9 321 aa18.48■□□□□ 0.55
C9orf3-215ENST00000478473 FOXRED2Q8IWF2 684 aa18.48■□□□□ 0.55
C9orf3-215ENST00000478473 STPG2Q8N412 459 aa18.48■□□□□ 0.55
C9orf3-215ENST00000478473 YTHDF1Q9BYJ9 559 aaKnown RBP18.48■□□□□ 0.55
C9orf3-215ENST00000478473 IFI27L2Q9H2X8 130 aa18.48■□□□□ 0.55
C9orf3-215ENST00000478473 MGAT4AQ9UM21 535 aa18.48■□□□□ 0.55
C9orf3-215ENST00000478473 SHISA3A0PJX4 238 aa18.47■□□□□ 0.55
C9orf3-215ENST00000478473 NCBP2LA6PVI3 153 aaKnown RBP18.47■□□□□ 0.55
C9orf3-215ENST00000478473 SERPINE3A8MV23 424 aa18.47■□□□□ 0.55
C9orf3-215ENST00000478473 AP4M1O00189 453 aa18.47■□□□□ 0.55
C9orf3-215ENST00000478473 SLC6A1P30531 599 aa18.47■□□□□ 0.55
C9orf3-215ENST00000478473 GPR12P47775 334 aa18.47■□□□□ 0.55
C9orf3-215ENST00000478473 NOL4LQ96MY1 436 aaPredicted RBP18.47■□□□□ 0.55
C9orf3-215ENST00000478473 NABP2Q9BQ15 211 aa18.47■□□□□ 0.55
C9orf3-215ENST00000478473 GHITMQ9H3K2 345 aa18.47■□□□□ 0.55
C9orf3-215ENST00000478473 ZFP57Q9NU63 452 aa18.47■□□□□ 0.55
C9orf3-215ENST00000478473 STEAP1Q9UHE8 339 aa18.47■□□□□ 0.55
C9orf3-215ENST00000478473 AK3Q9UIJ7 227 aa18.47■□□□□ 0.55
C9orf3-215ENST00000478473 F2RL1P55085 397 aa18.46■□□□□ 0.55
C9orf3-215ENST00000478473 ZNF329Q86UD4 541 aa18.46■□□□□ 0.55
C9orf3-215ENST00000478473 OR2AK2Q8NG84 335 aa18.46■□□□□ 0.55
C9orf3-215ENST00000478473 OR56B1Q8NGI3 324 aa18.46■□□□□ 0.55
C9orf3-215ENST00000478473 ZNF251Q9BRH9 671 aa18.46■□□□□ 0.55
C9orf3-215ENST00000478473 A0A1W2PRX2 142 aa18.45■□□□□ 0.54
C9orf3-215ENST00000478473 LINC01548A6NM66 108 aa18.45■□□□□ 0.54
C9orf3-215ENST00000478473 PDCD5O14737 125 aa18.45■□□□□ 0.54
C9orf3-215ENST00000478473 CLDN12P56749 244 aa18.45■□□□□ 0.54
C9orf3-215ENST00000478473 SLC35B1P78383 322 aa18.45■□□□□ 0.54
C9orf3-215ENST00000478473 SPARTQ8N0X7 666 aa18.45■□□□□ 0.54
C9orf3-215ENST00000478473 RNF152Q8N8N0 203 aa18.45■□□□□ 0.54
C9orf3-215ENST00000478473 AGMATQ9BSE5 352 aa18.45■□□□□ 0.54
C9orf3-215ENST00000478473 PECRQ9BY49 303 aa18.45■□□□□ 0.54
C9orf3-215ENST00000478473 Q9N2K0 584 aa18.45■□□□□ 0.54
C9orf3-215ENST00000478473 C12orf4Q9NQ89 552 aa18.45■□□□□ 0.54
C9orf3-215ENST00000478473 PIPOXQ9P0Z9 390 aa18.45■□□□□ 0.54
C9orf3-215ENST00000478473 SLC23A1Q9UHI7 598 aa18.45■□□□□ 0.54
C9orf3-215ENST00000478473 RAB22AQ9UL26 194 aa18.45■□□□□ 0.54
C9orf3-215ENST00000478473 TMEM272A0A1B0GTI8 110 aa18.44■□□□□ 0.54
C9orf3-215ENST00000478473 IFITM5A6NNB3 132 aa18.44■□□□□ 0.54
C9orf3-215ENST00000478473 IGF1P05019 195 aa18.44■□□□□ 0.54
C9orf3-215ENST00000478473 PF4V1P10720 104 aa18.44■□□□□ 0.54
C9orf3-215ENST00000478473 VEGFCP49767 419 aa18.44■□□□□ 0.54
C9orf3-215ENST00000478473 RPL23AP62750 156 aaKnown RBP18.44■□□□□ 0.54
C9orf3-215ENST00000478473 OXLD1Q5BKU9 147 aa18.44■□□□□ 0.54
C9orf3-215ENST00000478473 PLAC9Q5JTB6 97 aa18.44■□□□□ 0.54
C9orf3-215ENST00000478473 REC114Q7Z4M0 266 aa18.44■□□□□ 0.54
C9orf3-215ENST00000478473 PTX4Q96A99 478 aa18.44■□□□□ 0.54
C9orf3-215ENST00000478473 ARHGAP5-AS1Q96IT6 56 aa18.44■□□□□ 0.54
C9orf3-215ENST00000478473 RASL11BQ9BPW5 248 aa18.44■□□□□ 0.54
C9orf3-215ENST00000478473 GON7Q9BXV9 100 aa18.44■□□□□ 0.54
C9orf3-215ENST00000478473 CHMP1AQ9HD42 196 aaPredicted RBP18.44■□□□□ 0.54
C9orf3-215ENST00000478473 SAA2-SAA4A0A096LPE2 208 aa18.43■□□□□ 0.54
C9orf3-215ENST00000478473 SAA2P0DJI9 122 aaPredicted RBP18.43■□□□□ 0.54
C9orf3-215ENST00000478473 FGF9P31371 208 aaPredicted RBP18.43■□□□□ 0.54
C9orf3-215ENST00000478473 HLA-DRB3P79483 266 aa18.43■□□□□ 0.54
C9orf3-215ENST00000478473 CFHR3Q02985 330 aa18.43■□□□□ 0.54
C9orf3-215ENST00000478473 IL1F10Q8WWZ1 152 aa18.43■□□□□ 0.54
C9orf3-215ENST00000478473 CHCHD6Q9BRQ6 235 aa18.43■□□□□ 0.54
C9orf3-215ENST00000478473 HDHD3Q9BSH5 251 aaPredicted RBP18.43■□□□□ 0.54
C9orf3-215ENST00000478473 MRPL20Q9BYC9 149 aaKnown RBP18.43■□□□□ 0.54
C9orf3-215ENST00000478473 TOLLIPQ9H0E2 274 aa18.43■□□□□ 0.54
C9orf3-215ENST00000478473 Q9H521 79 aa18.43■□□□□ 0.54
C9orf3-215ENST00000478473 KCNK7Q9Y2U2 307 aa18.43■□□□□ 0.54
C9orf3-215ENST00000478473 RAB29O14966 203 aa18.42■□□□□ 0.54
C9orf3-215ENST00000478473 RAB6AP20340 208 aa18.42■□□□□ 0.54
C9orf3-215ENST00000478473 SOX6P35712 828 aa18.42■□□□□ 0.54
C9orf3-215ENST00000478473 OR3A3P47888 321 aa18.42■□□□□ 0.54
C9orf3-215ENST00000478473 PNLIPRP3Q17RR3 467 aa18.42■□□□□ 0.54
C9orf3-215ENST00000478473 TEX38Q6PEX7 206 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms