RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 DMAC2Q9NW81 257 aa0.7□□□□□ -2.3
RNU4-48P-201ENST00000365559 MAT2BQ9NZL9 334 aa0.7□□□□□ -2.3
RNU4-48P-201ENST00000365559 DOK5Q9P104 306 aa0.7□□□□□ -2.3
RNU4-48P-201ENST00000365559 MRPS16Q9Y3D3 137 aaKnown RBP0.7□□□□□ -2.3
RNU4-48P-201ENST00000365559 TNIKQ9UKE5 1360 aa0.7□□□□□ -2.3
RNU4-48P-201ENST00000365559 MALRD1Q5VYJ5 2156 aa0.69□□□□□ -2.3
RNU4-48P-201ENST00000365559 IGHV3-15A0A0B4J1V0 119 aa0.69□□□□□ -2.3
RNU4-48P-201ENST00000365559 RAB19A4D1S5 217 aa0.69□□□□□ -2.3
RNU4-48P-201ENST00000365559 GOLGA8IPA6NC78 632 aa0.69□□□□□ -2.3
RNU4-48P-201ENST00000365559 GNRH2O43555 120 aa0.69□□□□□ -2.3
RNU4-48P-201ENST00000365559 ACTR1BP42025 376 aa0.69□□□□□ -2.3
RNU4-48P-201ENST00000365559 MAGEA12P43365 314 aa0.69□□□□□ -2.3
RNU4-48P-201ENST00000365559 OR10A3P58181 314 aa0.69□□□□□ -2.3
RNU4-48P-201ENST00000365559 UAP1Q16222 522 aaPredicted RBP0.69□□□□□ -2.3
RNU4-48P-201ENST00000365559 C18orf21Q32NC0 220 aaPredicted RBP0.69□□□□□ -2.3
RNU4-48P-201ENST00000365559 CENPWQ5EE01 88 aa0.69□□□□□ -2.3
RNU4-48P-201ENST00000365559 OR10J3Q5JRS4 329 aa0.69□□□□□ -2.3
RNU4-48P-201ENST00000365559 GLT6D1Q7Z4J2 308 aa0.69□□□□□ -2.3
RNU4-48P-201ENST00000365559 IFT81Q8WYA0 676 aa0.69□□□□□ -2.3
RNU4-48P-201ENST00000365559 MND1Q9BWT6 205 aa0.69□□□□□ -2.3
RNU4-48P-201ENST00000365559 RAB1BQ9H0U4 201 aa0.69□□□□□ -2.3
RNU4-48P-201ENST00000365559 ALG5Q9Y673 324 aa0.69□□□□□ -2.3
RNU4-48P-201ENST00000365559 KDM5BQ9UGL1 1544 aa0.69□□□□□ -2.3
RNU4-48P-201ENST00000365559 A8MUN3 132 aa0.68□□□□□ -2.3
RNU4-48P-201ENST00000365559 UBFD1O14562 309 aaKnown RBP0.68□□□□□ -2.3
RNU4-48P-201ENST00000365559 GPR171O14626 319 aa0.68□□□□□ -2.3
RNU4-48P-201ENST00000365559 CRXO43186 299 aaPredicted RBP0.68□□□□□ -2.3
RNU4-48P-201ENST00000365559 ATF1P18846 271 aa0.68□□□□□ -2.3
RNU4-48P-201ENST00000365559 ORM2P19652 201 aa0.68□□□□□ -2.3
RNU4-48P-201ENST00000365559 GADD45AP24522 165 aa0.68□□□□□ -2.3
RNU4-48P-201ENST00000365559 CARD18P57730 90 aa0.68□□□□□ -2.3
RNU4-48P-201ENST00000365559 TRMT12Q53H54 448 aaKnown RBP0.68□□□□□ -2.3
RNU4-48P-201ENST00000365559 FAM201AQ5SY85 155 aa0.68□□□□□ -2.3
RNU4-48P-201ENST00000365559 Q6ZTI0 123 aa0.68□□□□□ -2.3
RNU4-48P-201ENST00000365559 OR4P4Q8NGL7 312 aa0.68□□□□□ -2.3
RNU4-48P-201ENST00000365559 FGF13Q92913 245 aa0.68□□□□□ -2.3
RNU4-48P-201ENST00000365559 RETNLBQ9BQ08 111 aa0.68□□□□□ -2.3
RNU4-48P-201ENST00000365559 MED18Q9BUE0 208 aa0.68□□□□□ -2.3
RNU4-48P-201ENST00000365559 SCN9AQ15858 1988 aa0.67□□□□□ -2.3
RNU4-48P-201ENST00000365559 MDFIC2A0A1B0GVS7 189 aa0.67□□□□□ -2.3
RNU4-48P-201ENST00000365559 A0A1B0GX12 115 aa0.67□□□□□ -2.3
RNU4-48P-201ENST00000365559 LINC00862A6NCI5 91 aa0.67□□□□□ -2.3
RNU4-48P-201ENST00000365559 EFCAB9A8MZ26 197 aa0.67□□□□□ -2.3
RNU4-48P-201ENST00000365559 CRHBPP24387 322 aa0.67□□□□□ -2.3
RNU4-48P-201ENST00000365559 RCVRNP35243 200 aa0.67□□□□□ -2.3
RNU4-48P-201ENST00000365559 PSMB3P49720 205 aa0.67□□□□□ -2.3
RNU4-48P-201ENST00000365559 RAP1GDS1P52306 607 aa0.67□□□□□ -2.3
RNU4-48P-201ENST00000365559 ACTBP60709 375 aa0.67□□□□□ -2.3
RNU4-48P-201ENST00000365559 FGF12P61328 243 aa0.67□□□□□ -2.3
RNU4-48P-201ENST00000365559 ACTG1P63261 375 aa0.67□□□□□ -2.3
RNU4-48P-201ENST00000365559 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.67□□□□□ -2.3
RNU4-48P-201ENST00000365559 MTERF4Q7Z6M4 381 aaKnown RBP0.67□□□□□ -2.3
RNU4-48P-201ENST00000365559 MRPL52Q86TS9 123 aaKnown RBP0.67□□□□□ -2.3
RNU4-48P-201ENST00000365559 C10orf126Q8N4M7 172 aa0.67□□□□□ -2.3
RNU4-48P-201ENST00000365559 TMEM75Q8N9X5 138 aa0.67□□□□□ -2.3
RNU4-48P-201ENST00000365559 GOLPH3Q9H4A6 298 aa0.67□□□□□ -2.3
RNU4-48P-201ENST00000365559 SNX12Q9UMY4 172 aa0.67□□□□□ -2.3
RNU4-48P-201ENST00000365559 PUS1Q9Y606 427 aaKnown RBP eCLIP0.67□□□□□ -2.3
RNU4-48P-201ENST00000365559 CCDC88CQ9P219 2028 aa0.67□□□□□ -2.3
RNU4-48P-201ENST00000365559 TMEM235A6NFC5 223 aa0.66□□□□□ -2.3
RNU4-48P-201ENST00000365559 ZW10O43264 779 aa0.66□□□□□ -2.3
RNU4-48P-201ENST00000365559 CST4P01036 141 aa0.66□□□□□ -2.3
RNU4-48P-201ENST00000365559 ZNF705DP0CH99 300 aaPredicted RBP0.66□□□□□ -2.3
RNU4-48P-201ENST00000365559 ZNF705BP0CI00 300 aaPredicted RBP0.66□□□□□ -2.3
RNU4-48P-201ENST00000365559 CDK2P24941 298 aa0.66□□□□□ -2.3
RNU4-48P-201ENST00000365559 SERPINB10P48595 397 aa0.66□□□□□ -2.3
RNU4-48P-201ENST00000365559 RPL14P50914 215 aaKnown RBP0.66□□□□□ -2.3
RNU4-48P-201ENST00000365559 TNNC1P63316 161 aa0.66□□□□□ -2.3
RNU4-48P-201ENST00000365559 ZNF90Q03938 601 aa0.66□□□□□ -2.3
RNU4-48P-201ENST00000365559 FNDC9Q8TBE3 224 aa0.66□□□□□ -2.3
RNU4-48P-201ENST00000365559 C10orf105Q8TEF2 133 aa0.66□□□□□ -2.3
RNU4-48P-201ENST00000365559 TMEM239Q8WW34 195 aa0.66□□□□□ -2.3
RNU4-48P-201ENST00000365559 TRNT1Q96Q11 434 aaKnown RBP0.66□□□□□ -2.3
RNU4-48P-201ENST00000365559 CHST5Q9GZS9 411 aa0.66□□□□□ -2.3
RNU4-48P-201ENST00000365559 TMEM216Q9P0N5 145 aa0.66□□□□□ -2.3
RNU4-48P-201ENST00000365559 TMSB15BA0A087X1C1 80 aa0.65□□□□□ -2.31
RNU4-48P-201ENST00000365559 GRIFINA4D1Z8 144 aa0.65□□□□□ -2.31
RNU4-48P-201ENST00000365559 RFPL4AA6NLU0 287 aa0.65□□□□□ -2.31
RNU4-48P-201ENST00000365559 OR5K4A6NMS3 321 aa0.65□□□□□ -2.31
RNU4-48P-201ENST00000365559 ZNF705FA8MVS1 300 aaPredicted RBP0.65□□□□□ -2.31
RNU4-48P-201ENST00000365559 C2orf74A8MZ97 194 aa0.65□□□□□ -2.31
RNU4-48P-201ENST00000365559 RFPL4AL1F8VTS6 287 aa0.65□□□□□ -2.31
RNU4-48P-201ENST00000365559 H0YC42 278 aa0.65□□□□□ -2.31
RNU4-48P-201ENST00000365559 SNAP29O95721 258 aa0.65□□□□□ -2.31
RNU4-48P-201ENST00000365559 LDOC1O95751 146 aaPredicted RBP0.65□□□□□ -2.31
RNU4-48P-201ENST00000365559 ZNF728P0DKX0 622 aa0.65□□□□□ -2.31
RNU4-48P-201ENST00000365559 CCL3P10147 92 aa0.65□□□□□ -2.31
RNU4-48P-201ENST00000365559 NPPCP23582 126 aa0.65□□□□□ -2.31
RNU4-48P-201ENST00000365559 CRYBB3P26998 211 aa0.65□□□□□ -2.31
RNU4-48P-201ENST00000365559 LINC00313P59037 77 aa0.65□□□□□ -2.31
RNU4-48P-201ENST00000365559 ERHP84090 104 aaKnown RBP0.65□□□□□ -2.31
RNU4-48P-201ENST00000365559 PRB3Q04118 309 aaPredicted RBP0.65□□□□□ -2.31
RNU4-48P-201ENST00000365559 RAB31Q13636 194 aa0.65□□□□□ -2.31
RNU4-48P-201ENST00000365559 FLOT2Q14254 428 aa0.65□□□□□ -2.31
RNU4-48P-201ENST00000365559 LRRC6Q86X45 466 aa0.65□□□□□ -2.31
RNU4-48P-201ENST00000365559 ST13P4Q8IZP2 240 aaPredicted RBP0.65□□□□□ -2.31
RNU4-48P-201ENST00000365559 OR5K1Q8NHB7 308 aa0.65□□□□□ -2.31
RNU4-48P-201ENST00000365559 LHFPL5Q8TAF8 219 aa0.65□□□□□ -2.31
RNU4-48P-201ENST00000365559 LRRC20Q8TCA0 184 aa0.65□□□□□ -2.31
RNU4-48P-201ENST00000365559 MRM2Q9UI43 246 aaKnown RBP0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms