RNA–Protein interactions for RNA: ENST00000364700.1

RNU4-56P-201, Transcript of RNA, U4 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU4-56P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-56P-201ENST00000364700 CFAP53Q96M91 514 aa0.89□□□□□ -2.27
RNU4-56P-201ENST00000364700 GPR22Q99680 433 aa0.89□□□□□ -2.27
RNU4-56P-201ENST00000364700 ZNF426Q9BUY5 554 aa0.89□□□□□ -2.27
RNU4-56P-201ENST00000364700 KCNIP2Q9NS61 270 aa0.89□□□□□ -2.27
RNU4-56P-201ENST00000364700 IMP3Q9NV31 184 aaKnown RBP0.89□□□□□ -2.27
RNU4-56P-201ENST00000364700 COMMD9Q9P000 198 aa0.89□□□□□ -2.27
RNU4-56P-201ENST00000364700 TMEM216Q9P0N5 145 aa0.89□□□□□ -2.27
RNU4-56P-201ENST00000364700 PSORS1C2Q9UIG4 136 aa0.89□□□□□ -2.27
RNU4-56P-201ENST00000364700 PUS1Q9Y606 427 aaKnown RBP eCLIP0.89□□□□□ -2.27
RNU4-56P-201ENST00000364700 RIMS2Q9UQ26 1411 aa0.89□□□□□ -2.27
RNU4-56P-201ENST00000364700 THSD7AQ9UPZ6 1657 aa0.88□□□□□ -2.27
RNU4-56P-201ENST00000364700 EIF4G1Q04637 1599 aaKnown RBP0.88□□□□□ -2.27
RNU4-56P-201ENST00000364700 PIK3R4Q99570 1358 aa0.88□□□□□ -2.27
RNU4-56P-201ENST00000364700 FABP12A6NFH5 140 aa0.88□□□□□ -2.27
RNU4-56P-201ENST00000364700 ERICH4A6NGS2 130 aa0.88□□□□□ -2.27
RNU4-56P-201ENST00000364700 ARGFXA6NJG6 315 aa0.88□□□□□ -2.27
RNU4-56P-201ENST00000364700 TRPC5OSA6NMA1 111 aa0.88□□□□□ -2.27
RNU4-56P-201ENST00000364700 ASS1P00966 412 aaKnown RBP0.88□□□□□ -2.27
RNU4-56P-201ENST00000364700 ATF1P18846 271 aa0.88□□□□□ -2.27
RNU4-56P-201ENST00000364700 GADD45AP24522 165 aa0.88□□□□□ -2.27
RNU4-56P-201ENST00000364700 CDK2P24941 298 aa0.88□□□□□ -2.27
RNU4-56P-201ENST00000364700 BLVRBP30043 206 aaPredicted RBP0.88□□□□□ -2.27
RNU4-56P-201ENST00000364700 PSMD8P48556 350 aa0.88□□□□□ -2.27
RNU4-56P-201ENST00000364700 CLDN12P56749 244 aa0.88□□□□□ -2.27
RNU4-56P-201ENST00000364700 MGAT3Q09327 533 aa0.88□□□□□ -2.27
RNU4-56P-201ENST00000364700 HES1Q14469 280 aa0.88□□□□□ -2.27
RNU4-56P-201ENST00000364700 CST6Q15828 149 aa0.88□□□□□ -2.27
RNU4-56P-201ENST00000364700 EXOC3L4Q17RC7 722 aa0.88□□□□□ -2.27
RNU4-56P-201ENST00000364700 TBC1D28Q2M2D7 210 aa0.88□□□□□ -2.27
RNU4-56P-201ENST00000364700 KRTAP13-4Q3LI77 160 aa0.88□□□□□ -2.27
RNU4-56P-201ENST00000364700 MRPL51Q4U2R6 128 aaKnown RBP0.88□□□□□ -2.27
RNU4-56P-201ENST00000364700 DOLPP1Q86YN1 238 aa0.88□□□□□ -2.27
RNU4-56P-201ENST00000364700 LFNGQ8NES3 379 aa0.88□□□□□ -2.27
RNU4-56P-201ENST00000364700 OR8K1Q8NGG5 319 aa0.88□□□□□ -2.27
RNU4-56P-201ENST00000364700 STOML3Q8TAV4 291 aa0.88□□□□□ -2.27
RNU4-56P-201ENST00000364700 PPCDCQ96CD2 204 aa0.88□□□□□ -2.27
RNU4-56P-201ENST00000364700 ZNF251Q9BRH9 671 aa0.88□□□□□ -2.27
RNU4-56P-201ENST00000364700 ZNF471Q9BX82 626 aaPredicted RBP0.88□□□□□ -2.27
RNU4-56P-201ENST00000364700 CXCL16Q9H2A7 254 aa0.88□□□□□ -2.27
RNU4-56P-201ENST00000364700 MRPL16Q9NX20 251 aaKnown RBP0.88□□□□□ -2.27
RNU4-56P-201ENST00000364700 LINC00527Q9UJ94 153 aa0.88□□□□□ -2.27
RNU4-56P-201ENST00000364700 CFAP45Q9UL16 551 aa0.88□□□□□ -2.27
RNU4-56P-201ENST00000364700 NPATQ14207 1427 aa0.88□□□□□ -2.27
RNU4-56P-201ENST00000364700 PTPRJQ12913 1337 aa0.88□□□□□ -2.27
RNU4-56P-201ENST00000364700 CR1P17927 2039 aa0.88□□□□□ -2.27
RNU4-56P-201ENST00000364700 MUC21A0A0G2JKD1 596 aa0.87□□□□□ -2.27
RNU4-56P-201ENST00000364700 MUC21A0A140T8X8 626 aa0.87□□□□□ -2.27
RNU4-56P-201ENST00000364700 ZNF878C9JN71 531 aa0.87□□□□□ -2.27
RNU4-56P-201ENST00000364700 KLRC4-KLRK1H3BQV0 150 aa0.87□□□□□ -2.27
RNU4-56P-201ENST00000364700 M0QYV0 167 aa0.87□□□□□ -2.27
RNU4-56P-201ENST00000364700 TOR1AO14656 332 aa0.87□□□□□ -2.27
RNU4-56P-201ENST00000364700 EEF1E1O43324 174 aaKnown RBP0.87□□□□□ -2.27
RNU4-56P-201ENST00000364700 CDK14O94921 469 aa0.87□□□□□ -2.27
RNU4-56P-201ENST00000364700 CRYGDP07320 174 aa0.87□□□□□ -2.27
RNU4-56P-201ENST00000364700 CCL3P10147 92 aa0.87□□□□□ -2.27
RNU4-56P-201ENST00000364700 CSRP1P21291 193 aaKnown RBP0.87□□□□□ -2.27
RNU4-56P-201ENST00000364700 CRABP1P29762 137 aa0.87□□□□□ -2.27
RNU4-56P-201ENST00000364700 HSPA9P38646 679 aaKnown RBP0.87□□□□□ -2.27
RNU4-56P-201ENST00000364700 CRATP43155 626 aa0.87□□□□□ -2.27
RNU4-56P-201ENST00000364700 TSPEAR-AS2P59090 65 aa0.87□□□□□ -2.27
RNU4-56P-201ENST00000364700 UBE2G2P60604 165 aa0.87□□□□□ -2.27
RNU4-56P-201ENST00000364700 DEFA6Q01524 100 aa0.87□□□□□ -2.27
RNU4-56P-201ENST00000364700 HTR4Q13639 388 aa0.87□□□□□ -2.27
RNU4-56P-201ENST00000364700 TPRXLQ17RH7 258 aa0.87□□□□□ -2.27
RNU4-56P-201ENST00000364700 DRAM2Q6UX65 266 aa0.87□□□□□ -2.27
RNU4-56P-201ENST00000364700 ZNF767PQ75MW2 155 aa0.87□□□□□ -2.27
RNU4-56P-201ENST00000364700 SPATA24Q86W54 205 aa0.87□□□□□ -2.27
RNU4-56P-201ENST00000364700 OR51H1Q8NH63 302 aa0.87□□□□□ -2.27
RNU4-56P-201ENST00000364700 MFSD8Q8NHS3 518 aa0.87□□□□□ -2.27
RNU4-56P-201ENST00000364700 ACY3Q96HD9 319 aa0.87□□□□□ -2.27
RNU4-56P-201ENST00000364700 ZNF514Q96K75 400 aaPredicted RBP0.87□□□□□ -2.27
RNU4-56P-201ENST00000364700 STACQ99469 402 aa0.87□□□□□ -2.27
RNU4-56P-201ENST00000364700 AICDAQ9GZX7 198 aa0.87□□□□□ -2.27
RNU4-56P-201ENST00000364700 SMDT1Q9H4I9 107 aa0.87□□□□□ -2.27
RNU4-56P-201ENST00000364700 SIPA1L1O43166 1804 aa0.87□□□□□ -2.27
RNU4-56P-201ENST00000364700 A8MWP6 167 aa0.86□□□□□ -2.27
RNU4-56P-201ENST00000364700 FTCDNL1E5RQL4 147 aa0.86□□□□□ -2.27
RNU4-56P-201ENST00000364700 ITGB1BP1O14713 200 aa0.86□□□□□ -2.27
RNU4-56P-201ENST00000364700 CALUO43852 315 aaPredicted RBP0.86□□□□□ -2.27
RNU4-56P-201ENST00000364700 ATP5G1P05496 136 aa0.86□□□□□ -2.27
RNU4-56P-201ENST00000364700 FBP1P09467 338 aa0.86□□□□□ -2.27
RNU4-56P-201ENST00000364700 ZNF7P17097 686 aaPredicted RBP0.86□□□□□ -2.27
RNU4-56P-201ENST00000364700 CRYBB3P26998 211 aa0.86□□□□□ -2.27
RNU4-56P-201ENST00000364700 MIPP30301 263 aa0.86□□□□□ -2.27
RNU4-56P-201ENST00000364700 AGTR1P30556 359 aa0.86□□□□□ -2.27
RNU4-56P-201ENST00000364700 GABRA3P34903 492 aa0.86□□□□□ -2.27
RNU4-56P-201ENST00000364700 OR1E2P47887 323 aa0.86□□□□□ -2.27
RNU4-56P-201ENST00000364700 EMP2P54851 167 aa0.86□□□□□ -2.27
RNU4-56P-201ENST00000364700 DEFB103AP81534 67 aa0.86□□□□□ -2.27
RNU4-56P-201ENST00000364700 LCN8Q6JVE9 175 aa0.86□□□□□ -2.27
RNU4-56P-201ENST00000364700 FAM19A5Q7Z5A7 132 aaPredicted RBP0.86□□□□□ -2.27
RNU4-56P-201ENST00000364700 CRLF3Q8IUI8 442 aa0.86□□□□□ -2.27
RNU4-56P-201ENST00000364700 PPWD1Q96BP3 646 aaKnown RBP0.86□□□□□ -2.27
RNU4-56P-201ENST00000364700 LRRC45Q96CN5 670 aa0.86□□□□□ -2.27
RNU4-56P-201ENST00000364700 TRNT1Q96Q11 434 aaKnown RBP0.86□□□□□ -2.27
RNU4-56P-201ENST00000364700 SLC22A4Q9H015 551 aa0.86□□□□□ -2.27
RNU4-56P-201ENST00000364700 WASHC3Q9Y3C0 194 aa0.86□□□□□ -2.27
RNU4-56P-201ENST00000364700 HELZ2Q9BYK8 2649 aaKnown RBP0.86□□□□□ -2.27
RNU4-56P-201ENST00000364700 REREQ9P2R6 1566 aa0.86□□□□□ -2.27
RNU4-56P-201ENST00000364700 CPAMD8Q8IZJ3 1885 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms