RNA–Protein interactions for RNA: ENST00000600236.1

HIF3A-217, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 313 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-217ENST00000600236 RBM11P57052 281 aaKnown RBP9.09□□□□□ -0.95
HIF3A-217ENST00000600236 ZNF45Q02386 682 aa9.09□□□□□ -0.95
HIF3A-217ENST00000600236 GPR176Q14439 515 aa9.09□□□□□ -0.95
HIF3A-217ENST00000600236 MPV17LQ2QL34 196 aa9.09□□□□□ -0.95
HIF3A-217ENST00000600236 TCTEX1D4Q5JR98 221 aa9.09□□□□□ -0.95
HIF3A-217ENST00000600236 NHLRC3Q5JS37 347 aa9.09□□□□□ -0.95
HIF3A-217ENST00000600236 CCDC190Q86UF4 302 aa9.09□□□□□ -0.95
HIF3A-217ENST00000600236 FOXRED2Q8IWF2 684 aa9.09□□□□□ -0.95
HIF3A-217ENST00000600236 COMMD1Q8N668 190 aa9.09□□□□□ -0.95
HIF3A-217ENST00000600236 DRAM1Q8N682 238 aa9.09□□□□□ -0.95
HIF3A-217ENST00000600236 RFESDQ8TAC1 157 aa9.09□□□□□ -0.95
HIF3A-217ENST00000600236 PLPPR1Q8TBJ4 325 aa9.09□□□□□ -0.95
HIF3A-217ENST00000600236 NEK7Q8TDX7 302 aa9.09□□□□□ -0.95
HIF3A-217ENST00000600236 PHYHIPQ92561 330 aa9.09□□□□□ -0.95
HIF3A-217ENST00000600236 TMED9Q9BVK6 235 aa9.09□□□□□ -0.95
HIF3A-217ENST00000600236 IFT22Q9H7X7 185 aa9.09□□□□□ -0.95
HIF3A-217ENST00000600236 IL36GQ9NZH8 169 aa9.09□□□□□ -0.95
HIF3A-217ENST00000600236 ZNF281Q9Y2X9 895 aa9.09□□□□□ -0.95
HIF3A-217ENST00000600236 PNMA8CA0A1B0GUJ8 204 aa9.08□□□□□ -0.96
HIF3A-217ENST00000600236 A0A1W2PPI3 338 aa9.08□□□□□ -0.96
HIF3A-217ENST00000600236 J3QRK9 145 aa9.08□□□□□ -0.96
HIF3A-217ENST00000600236 HSD17B6O14756 317 aa9.08□□□□□ -0.96
HIF3A-217ENST00000600236 MPIG6BO95866 241 aa9.08□□□□□ -0.96
HIF3A-217ENST00000600236 GAPDHP04406 335 aaKnown RBP9.08□□□□□ -0.96
HIF3A-217ENST00000600236 GTF2F2P13984 249 aa9.08□□□□□ -0.96
HIF3A-217ENST00000600236 SERPINA2P20848 420 aa9.08□□□□□ -0.96
HIF3A-217ENST00000600236 S100A5P33763 92 aa9.08□□□□□ -0.96
HIF3A-217ENST00000600236 SDC2P34741 201 aa9.08□□□□□ -0.96
HIF3A-217ENST00000600236 PPP5CP53041 499 aa9.08□□□□□ -0.96
HIF3A-217ENST00000600236 ZNF816Q0VGE8 651 aaPredicted RBP9.08□□□□□ -0.96
HIF3A-217ENST00000600236 ATAD3CQ5T2N8 411 aa9.08□□□□□ -0.96
HIF3A-217ENST00000600236 SLC35E3Q7Z769 313 aa9.08□□□□□ -0.96
HIF3A-217ENST00000600236 C5orf56Q8N8D9 126 aa9.08□□□□□ -0.96
HIF3A-217ENST00000600236 OR52M1Q8NGK5 317 aa9.08□□□□□ -0.96
HIF3A-217ENST00000600236 RGP1Q92546 391 aaPredicted RBP9.08□□□□□ -0.96
HIF3A-217ENST00000600236 AP3S1Q92572 193 aa9.08□□□□□ -0.96
HIF3A-217ENST00000600236 LEAP2Q969E1 77 aa9.08□□□□□ -0.96
HIF3A-217ENST00000600236 MCRIP2Q9BUT9 160 aaKnown RBP9.08□□□□□ -0.96
HIF3A-217ENST00000600236 GON7Q9BXV9 100 aa9.08□□□□□ -0.96
HIF3A-217ENST00000600236 C6orf62Q9GZU0 229 aaPredicted RBP9.08□□□□□ -0.96
HIF3A-217ENST00000600236 SPACA1Q9HBV2 294 aa9.08□□□□□ -0.96
HIF3A-217ENST00000600236 ZFP57Q9NU63 452 aa9.08□□□□□ -0.96
HIF3A-217ENST00000600236 TRAV1-2A0A0B4J238 106 aa9.07□□□□□ -0.96
HIF3A-217ENST00000600236 NUDT19A8MXV4 375 aa9.07□□□□□ -0.96
HIF3A-217ENST00000600236 AIPO00170 330 aa9.07□□□□□ -0.96
HIF3A-217ENST00000600236 SDCBPO00560 298 aaPredicted RBP9.07□□□□□ -0.96
HIF3A-217ENST00000600236 GEMIN2O14893 280 aaKnown RBP9.07□□□□□ -0.96
HIF3A-217ENST00000600236 RPL23AP62750 156 aaKnown RBP9.07□□□□□ -0.96
HIF3A-217ENST00000600236 HNF4GQ14541 408 aa9.07□□□□□ -0.96
HIF3A-217ENST00000600236 Q3ZCU0 254 aa9.07□□□□□ -0.96
HIF3A-217ENST00000600236 YIF1BQ5BJH7 314 aa9.07□□□□□ -0.96
HIF3A-217ENST00000600236 UTF1Q5T230 341 aa9.07□□□□□ -0.96
HIF3A-217ENST00000600236 C10orf99Q6UWK7 81 aa9.07□□□□□ -0.96
HIF3A-217ENST00000600236 UNQ9370/PRO34162Q6UXP9 181 aa9.07□□□□□ -0.96
HIF3A-217ENST00000600236 MOB3BQ86TA1 216 aa9.07□□□□□ -0.96
HIF3A-217ENST00000600236 ZNF329Q86UD4 541 aa9.07□□□□□ -0.96
HIF3A-217ENST00000600236 TPRA1Q86W33 373 aa9.07□□□□□ -0.96
HIF3A-217ENST00000600236 GHSRQ92847 366 aa9.07□□□□□ -0.96
HIF3A-217ENST00000600236 ARL11Q969Q4 196 aa9.07□□□□□ -0.96
HIF3A-217ENST00000600236 ZMAT5Q9UDW3 170 aaKnown RBP9.07□□□□□ -0.96
HIF3A-217ENST00000600236 PKD1L1Q8TDX9 2849 aa9.07□□□□□ -0.96
HIF3A-217ENST00000600236 IGHV1-3A0A0C4DH29 117 aa9.06□□□□□ -0.96
HIF3A-217ENST00000600236 SHISA3A0PJX4 238 aa9.06□□□□□ -0.96
HIF3A-217ENST00000600236 NCBP2LA6PVI3 153 aaKnown RBP9.06□□□□□ -0.96
HIF3A-217ENST00000600236 PLXNB1O43157 2135 aa9.06□□□□□ -0.96
HIF3A-217ENST00000600236 TXNL1O43396 289 aa9.06□□□□□ -0.96
HIF3A-217ENST00000600236 ORC5O43913 435 aa9.06□□□□□ -0.96
HIF3A-217ENST00000600236 UCHL1P09936 223 aa9.06□□□□□ -0.96
HIF3A-217ENST00000600236 CLEC2LP0C7M8 214 aa9.06□□□□□ -0.96
HIF3A-217ENST00000600236 RPS11P62280 158 aaKnown RBP eCLIP9.06□□□□□ -0.96
HIF3A-217ENST00000600236 DIAPH2-AS1Q14236 149 aa9.06□□□□□ -0.96
HIF3A-217ENST00000600236 TMEM30BQ3MIR4 351 aa9.06□□□□□ -0.96
HIF3A-217ENST00000600236 Q499Y3 187 aa9.06□□□□□ -0.96
HIF3A-217ENST00000600236 SLC22A6Q4U2R8 563 aa9.06□□□□□ -0.96
HIF3A-217ENST00000600236 C6orf183Q5T699 404 aa9.06□□□□□ -0.96
HIF3A-217ENST00000600236 IZUMO1Q8IYV9 350 aa9.06□□□□□ -0.96
HIF3A-217ENST00000600236 LINC00311Q8N616 119 aa9.06□□□□□ -0.96
HIF3A-217ENST00000600236 LINC00482Q8N8I6 264 aa9.06□□□□□ -0.96
HIF3A-217ENST00000600236 C8orf31Q8N9H6 132 aa9.06□□□□□ -0.96
HIF3A-217ENST00000600236 OR2T10Q8NGZ9 312 aa9.06□□□□□ -0.96
HIF3A-217ENST00000600236 ACOT12Q8WYK0 555 aa9.06□□□□□ -0.96
HIF3A-217ENST00000600236 KCTD12Q96CX2 325 aaKnown RBP9.06□□□□□ -0.96
HIF3A-217ENST00000600236 LIN7CQ9NUP9 197 aaKnown RBP9.06□□□□□ -0.96
HIF3A-217ENST00000600236 DSCAML1Q8TD84 2053 aa9.06□□□□□ -0.96
HIF3A-217ENST00000600236 TRAV39A0A0B4J263 110 aa9.05□□□□□ -0.96
HIF3A-217ENST00000600236 TRBV5-5A0A0J9YX44 114 aa9.05□□□□□ -0.96
HIF3A-217ENST00000600236 A0A1W2PPE3 182 aa9.05□□□□□ -0.96
HIF3A-217ENST00000600236 MCRIP1C9JLW8 97 aa9.05□□□□□ -0.96
HIF3A-217ENST00000600236 AP4M1O00189 453 aa9.05□□□□□ -0.96
HIF3A-217ENST00000600236 CTDSP2O14595 271 aa9.05□□□□□ -0.96
HIF3A-217ENST00000600236 SPINT2O43291 252 aa9.05□□□□□ -0.96
HIF3A-217ENST00000600236 TMEM127O75204 238 aa9.05□□□□□ -0.96
HIF3A-217ENST00000600236 ARL6IP5O75915 188 aa9.05□□□□□ -0.96
HIF3A-217ENST00000600236 IGHG2P01859 326 aa9.05□□□□□ -0.96
HIF3A-217ENST00000600236 FSTP19883 344 aa9.05□□□□□ -0.96
HIF3A-217ENST00000600236 MYL9P24844 172 aa9.05□□□□□ -0.96
HIF3A-217ENST00000600236 TNFSF8P32971 234 aa9.05□□□□□ -0.96
HIF3A-217ENST00000600236 MYCNOSP40205 109 aa9.05□□□□□ -0.96
HIF3A-217ENST00000600236 EBI3Q14213 229 aa9.05□□□□□ -0.96
HIF3A-217ENST00000600236 ACSM3Q53FZ2 586 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms