RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 TMEM167BQ9NRX6 74 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 ERRFI1Q9UJM3 462 aaPredicted RBP3.06□□□□□ -1.92
VMP1-216ENST00000592790 PPP1R3CQ9UQK1 317 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 PLXND1Q9Y4D7 1925 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 SPTAN1Q13813 2472 aaKnown RBP3.06□□□□□ -1.92
VMP1-216ENST00000592790 C5orf49A4QMS7 147 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 KLRC4-KLRK1H3BQV0 150 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 J3QT63 122 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 HS3ST1O14792 307 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 KCNAB3O43448 404 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 CXCL13O43927 109 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 PAX1P15863 534 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 MAS1LP35410 378 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 SRSF3P84103 164 aaKnown RBP3.06□□□□□ -1.92
VMP1-216ENST00000592790 HYAL1Q12794 435 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 RPEL1Q2QD12 228 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 CEACAM21Q3KPI0 293 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 PRAMEF5Q5TYX0 476 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 PRAMEF6Q5VXH4 476 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 SSX7Q7RTT5 188 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 C16orf82Q7Z2V1 217 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 NECAP1Q8NC96 275 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 OR4D5Q8NGN0 318 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 MBD3L1Q8WWY6 194 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 TMEM37Q8WXS4 190 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 GPR27Q9NS67 375 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 SLC35D1Q9NTN3 355 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 SLC45A2Q9UMX9 530 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 EP300Q09472 2414 aaPredicted RBP3.06□□□□□ -1.92
VMP1-216ENST00000592790 MDC1Q14676 2089 aaKnown RBP3.06□□□□□ -1.92
VMP1-216ENST00000592790 TMEM210A6NLX4 147 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 C11orf94C9JXX5 98 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 NRG2O14511 850 aaPredicted RBP3.06□□□□□ -1.92
VMP1-216ENST00000592790 CXorf1O96002 111 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 GYPAP02724 150 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 RD3LP0DJH9 198 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 IRF2P14316 349 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 GPR12P47775 334 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 GPM6AP51674 278 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 LBX1P52954 281 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 SUB1P53999 127 aaKnown RBP eCLIP3.06□□□□□ -1.92
VMP1-216ENST00000592790 UCP2P55851 309 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 ELOBQ15370 118 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 GABRA6Q16445 453 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 BATFQ16520 125 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 CSRP2Q16527 193 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 SMIM21Q3B7S5 101 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 PHYHD1Q5SRE7 291 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 TSPO2Q5TGU0 170 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 SPEM1Q8N4L4 309 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 WDR31Q8NA23 367 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 OR4B1Q8NGF8 309 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 OR52M1Q8NGK5 317 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 OR10G8Q8NGN5 311 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 RDH5Q92781 318 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 TAF15Q92804 592 aaKnown RBP eCLIP3.06□□□□□ -1.92
VMP1-216ENST00000592790 WNT2BQ93097 391 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 MEGF10Q96KG7 1140 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 HSD17B10Q99714 261 aaKnown RBP3.06□□□□□ -1.92
VMP1-216ENST00000592790 NDUFAF3Q9BU61 184 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 PRO1933Q9H354 126 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 SMOC1Q9H4F8 434 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 SDF2L1Q9HCN8 221 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 OBP2BQ9NPH6 170 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 TMEM74BQ9NUR3 256 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 GNG12Q9UBI6 72 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 CACNA1CQ13936 2221 aa3.05□□□□□ -1.92
VMP1-216ENST00000592790 IGLV3-12A0A075B6K2 115 aa3.05□□□□□ -1.92
VMP1-216ENST00000592790 A0A1W2PP11 408 aa3.05□□□□□ -1.92
VMP1-216ENST00000592790 OOEPA6NGQ2 149 aa3.05□□□□□ -1.92
VMP1-216ENST00000592790 H0YL77 283 aa3.05□□□□□ -1.92
VMP1-216ENST00000592790 ETV2O00321 342 aaPredicted RBP3.05□□□□□ -1.92
VMP1-216ENST00000592790 CIDEAO60543 219 aa3.05□□□□□ -1.92
VMP1-216ENST00000592790 TOX4O94842 621 aa3.05□□□□□ -1.92
VMP1-216ENST00000592790 IGHV2-5P01817 119 aa3.05□□□□□ -1.92
VMP1-216ENST00000592790 MYOGP15173 224 aa3.05□□□□□ -1.92
VMP1-216ENST00000592790 CRISP2P16562 243 aa3.05□□□□□ -1.92
VMP1-216ENST00000592790 TNFSF4P23510 183 aa3.05□□□□□ -1.92
VMP1-216ENST00000592790 RAB7AP51149 207 aa3.05□□□□□ -1.92
VMP1-216ENST00000592790 ATP5IP56385 69 aaPredicted RBP3.05□□□□□ -1.92
VMP1-216ENST00000592790 PLAURQ03405 335 aa3.05□□□□□ -1.92
VMP1-216ENST00000592790 ICAM4Q14773 271 aa3.05□□□□□ -1.92
VMP1-216ENST00000592790 ODF1Q14990 250 aa3.05□□□□□ -1.92
VMP1-216ENST00000592790 JOSD1Q15040 202 aaPredicted RBP3.05□□□□□ -1.92
VMP1-216ENST00000592790 COL5A1-AS1Q5SY13 56 aa3.05□□□□□ -1.92
VMP1-216ENST00000592790 ZNF385CQ66K41 422 aaPredicted RBP3.05□□□□□ -1.92
VMP1-216ENST00000592790 CYB5R2Q6BCY4 276 aa3.05□□□□□ -1.92
VMP1-216ENST00000592790 TOMM20LQ6UXN7 152 aa3.05□□□□□ -1.92
VMP1-216ENST00000592790 C19orf35Q6ZS72 473 aa3.05□□□□□ -1.92
VMP1-216ENST00000592790 OR5AU1Q8NGC0 362 aa3.05□□□□□ -1.92
VMP1-216ENST00000592790 ADTRPQ96IZ2 230 aa3.05□□□□□ -1.92
VMP1-216ENST00000592790 FAM173AQ9BQD7 235 aa3.05□□□□□ -1.92
VMP1-216ENST00000592790 AGMATQ9BSE5 352 aa3.05□□□□□ -1.92
VMP1-216ENST00000592790 DDA1Q9BW61 102 aa3.05□□□□□ -1.92
VMP1-216ENST00000592790 DUSP15Q9H1R2 295 aaPredicted RBP3.05□□□□□ -1.92
VMP1-216ENST00000592790 GPR35Q9HC97 309 aa3.05□□□□□ -1.92
VMP1-216ENST00000592790 GCM1Q9NP62 436 aa3.05□□□□□ -1.92
VMP1-216ENST00000592790 CCL28Q9NRJ3 127 aa3.05□□□□□ -1.92
VMP1-216ENST00000592790 SERTAD4Q9NUC0 356 aa3.05□□□□□ -1.92
VMP1-216ENST00000592790 KLF13Q9Y2Y9 288 aaPredicted RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms