RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 RGS5O15539 181 aa14.06□□□□□ -0.16
TOP3A-220ENST00000585031 IGKV1D-33P01593 117 aa14.06□□□□□ -0.16
TOP3A-220ENST00000585031 IGKV1-33P01594 117 aa14.06□□□□□ -0.16
TOP3A-220ENST00000585031 SPNP16150 400 aa14.06□□□□□ -0.16
TOP3A-220ENST00000585031 GPR12P47775 334 aa14.06□□□□□ -0.16
TOP3A-220ENST00000585031 INSL3P51460 131 aa14.06□□□□□ -0.16
TOP3A-220ENST00000585031 PRRX1P54821 245 aa14.06□□□□□ -0.16
TOP3A-220ENST00000585031 FOXE3Q13461 319 aa14.06□□□□□ -0.16
TOP3A-220ENST00000585031 INSL4Q14641 139 aa14.06□□□□□ -0.16
TOP3A-220ENST00000585031 Q499Y3 187 aa14.06□□□□□ -0.16
TOP3A-220ENST00000585031 CXorf66Q5JRM2 361 aaPredicted RBP14.06□□□□□ -0.16
TOP3A-220ENST00000585031 FOXRED2Q8IWF2 684 aa14.06□□□□□ -0.16
TOP3A-220ENST00000585031 MFSD4AQ8N468 514 aa14.06□□□□□ -0.16
TOP3A-220ENST00000585031 C4orf3Q8WVX3 66 aa14.06□□□□□ -0.16
TOP3A-220ENST00000585031 RPEQ96AT9 228 aa14.06□□□□□ -0.16
TOP3A-220ENST00000585031 CREB3L1Q96BA8 519 aa14.06□□□□□ -0.16
TOP3A-220ENST00000585031 KCTD12Q96CX2 325 aaKnown RBP14.06□□□□□ -0.16
TOP3A-220ENST00000585031 COQ2Q96H96 371 aa14.06□□□□□ -0.16
TOP3A-220ENST00000585031 TNCP24821 2201 aa14.06□□□□□ -0.16
TOP3A-220ENST00000585031 TRBV5-5A0A0J9YX44 114 aa14.05□□□□□ -0.16
TOP3A-220ENST00000585031 LOC110117498-PIK3R3F6TDL0 507 aa14.05□□□□□ -0.16
TOP3A-220ENST00000585031 CGB3P0DN86 165 aa14.05□□□□□ -0.16
TOP3A-220ENST00000585031 CGB7P0DN87 165 aa14.05□□□□□ -0.16
TOP3A-220ENST00000585031 RAB3BP20337 219 aa14.05□□□□□ -0.16
TOP3A-220ENST00000585031 CD40LGP29965 261 aa14.05□□□□□ -0.16
TOP3A-220ENST00000585031 ETV6P41212 452 aa14.05□□□□□ -0.16
TOP3A-220ENST00000585031 RPS11P62280 158 aaKnown RBP eCLIP14.05□□□□□ -0.16
TOP3A-220ENST00000585031 PPP3R1P63098 170 aa14.05□□□□□ -0.16
TOP3A-220ENST00000585031 KIAA0141Q14154 515 aaPredicted RBP14.05□□□□□ -0.16
TOP3A-220ENST00000585031 CATSPERDQ86XM0 798 aa14.05□□□□□ -0.16
TOP3A-220ENST00000585031 FAM58AQ8N1B3 248 aa14.05□□□□□ -0.16
TOP3A-220ENST00000585031 OR13C5Q8NGS8 318 aa14.05□□□□□ -0.16
TOP3A-220ENST00000585031 RNF166Q96A37 237 aaPredicted RBP14.05□□□□□ -0.16
TOP3A-220ENST00000585031 OR14A2Q96R54 314 aa14.05□□□□□ -0.16
TOP3A-220ENST00000585031 MOB1AQ9H8S9 216 aa14.05□□□□□ -0.16
TOP3A-220ENST00000585031 ING3Q9NXR8 418 aa14.05□□□□□ -0.16
TOP3A-220ENST00000585031 OR52A1Q9UKL2 312 aa14.05□□□□□ -0.16
TOP3A-220ENST00000585031 KMT2AQ03164 3969 aa14.04□□□□□ -0.16
TOP3A-220ENST00000585031 AP4M1O00189 453 aa14.04□□□□□ -0.16
TOP3A-220ENST00000585031 TMEM127O75204 238 aa14.04□□□□□ -0.16
TOP3A-220ENST00000585031 OR2H2O95918 312 aa14.04□□□□□ -0.16
TOP3A-220ENST00000585031 OCM2P0CE71 109 aa14.04□□□□□ -0.16
TOP3A-220ENST00000585031 PRKACAP17612 351 aa14.04□□□□□ -0.16
TOP3A-220ENST00000585031 NFYBP25208 207 aa14.04□□□□□ -0.16
TOP3A-220ENST00000585031 KIR3DL2P43630 455 aa14.04□□□□□ -0.16
TOP3A-220ENST00000585031 ODF4Q2M2E3 257 aa14.04□□□□□ -0.16
TOP3A-220ENST00000585031 BCL2L15Q5TBC7 163 aa14.04□□□□□ -0.16
TOP3A-220ENST00000585031 TSEN15Q8WW01 171 aaKnown RBP14.04□□□□□ -0.16
TOP3A-220ENST00000585031 KIRREL1Q96J84 757 aa14.04□□□□□ -0.16
TOP3A-220ENST00000585031 DERL3Q96Q80 235 aa14.04□□□□□ -0.16
TOP3A-220ENST00000585031 PPIL3Q9H2H8 161 aaKnown RBP14.04□□□□□ -0.16
TOP3A-220ENST00000585031 GNB4Q9HAV0 340 aa14.04□□□□□ -0.16
TOP3A-220ENST00000585031 ODAMA1E959 279 aa14.03□□□□□ -0.16
TOP3A-220ENST00000585031 DHRS7CA6NNS2 312 aa14.03□□□□□ -0.16
TOP3A-220ENST00000585031 NOTOA8MTQ0 251 aa14.03□□□□□ -0.16
TOP3A-220ENST00000585031 J3QR06 171 aa14.03□□□□□ -0.16
TOP3A-220ENST00000585031 J3QRK9 145 aa14.03□□□□□ -0.16
TOP3A-220ENST00000585031 CD2P06729 351 aa14.03□□□□□ -0.16
TOP3A-220ENST00000585031 ELANEP08246 267 aa14.03□□□□□ -0.16
TOP3A-220ENST00000585031 UBCP0CG48 685 aaKnown RBP14.03□□□□□ -0.16
TOP3A-220ENST00000585031 CCL1P22362 96 aa14.03□□□□□ -0.16
TOP3A-220ENST00000585031 PTGFRP43088 359 aa14.03□□□□□ -0.16
TOP3A-220ENST00000585031 PPP5CP53041 499 aa14.03□□□□□ -0.16
TOP3A-220ENST00000585031 EBI3Q14213 229 aa14.03□□□□□ -0.16
TOP3A-220ENST00000585031 FAM27D1Q5T7N8 215 aa14.03□□□□□ -0.16
TOP3A-220ENST00000585031 TMEM244Q5VVB8 128 aa14.03□□□□□ -0.16
TOP3A-220ENST00000585031 CCDC190Q86UF4 302 aa14.03□□□□□ -0.16
TOP3A-220ENST00000585031 PRSS35Q8N3Z0 413 aa14.03□□□□□ -0.16
TOP3A-220ENST00000585031 Q8N6K4 173 aa14.03□□□□□ -0.16
TOP3A-220ENST00000585031 Q8N9W7 124 aa14.03□□□□□ -0.16
TOP3A-220ENST00000585031 OR4D6Q8NGJ1 314 aa14.03□□□□□ -0.16
TOP3A-220ENST00000585031 OR9G1Q8NH87 305 aa14.03□□□□□ -0.16
TOP3A-220ENST00000585031 MYOZ3Q8TDC0 251 aa14.03□□□□□ -0.16
TOP3A-220ENST00000585031 RGP1Q92546 391 aaPredicted RBP14.03□□□□□ -0.16
TOP3A-220ENST00000585031 EAF1Q96JC9 268 aaPredicted RBP14.03□□□□□ -0.16
TOP3A-220ENST00000585031 HSPB9Q9BQS6 159 aa14.03□□□□□ -0.16
TOP3A-220ENST00000585031 ABCG5Q9H222 651 aa14.03□□□□□ -0.16
TOP3A-220ENST00000585031 PLSCR3Q9NRY6 295 aa14.03□□□□□ -0.16
TOP3A-220ENST00000585031 IGHV3-72A0A0B4J1Y9 119 aa14.02□□□□□ -0.17
TOP3A-220ENST00000585031 SHISA3A0PJX4 238 aa14.02□□□□□ -0.17
TOP3A-220ENST00000585031 SMIM30A4D0T7 59 aa14.02□□□□□ -0.17
TOP3A-220ENST00000585031 RBMY1BA6NDE4 496 aaKnown RBP14.02□□□□□ -0.17
TOP3A-220ENST00000585031 RBMY1EA6NEQ0 496 aaKnown RBP14.02□□□□□ -0.17
TOP3A-220ENST00000585031 I3L521 148 aa14.02□□□□□ -0.17
TOP3A-220ENST00000585031 CTDSP2O14595 271 aa14.02□□□□□ -0.17
TOP3A-220ENST00000585031 IGHG4P01861 327 aa14.02□□□□□ -0.17
TOP3A-220ENST00000585031 RBMY1DP0C7P1 496 aaKnown RBP14.02□□□□□ -0.17
TOP3A-220ENST00000585031 GP9P14770 177 aa14.02□□□□□ -0.17
TOP3A-220ENST00000585031 PSMB8P28062 276 aa14.02□□□□□ -0.17
TOP3A-220ENST00000585031 TNFSF8P32971 234 aa14.02□□□□□ -0.17
TOP3A-220ENST00000585031 PSMD7P51665 324 aa14.02□□□□□ -0.17
TOP3A-220ENST00000585031 FUT6P51993 359 aa14.02□□□□□ -0.17
TOP3A-220ENST00000585031 GNB1P62873 340 aa14.02□□□□□ -0.17
TOP3A-220ENST00000585031 SFXN4Q6P4A7 337 aa14.02□□□□□ -0.17
TOP3A-220ENST00000585031 DCUN1D4Q92564 292 aa14.02□□□□□ -0.17
TOP3A-220ENST00000585031 KLK15Q9H2R5 256 aa14.02□□□□□ -0.17
TOP3A-220ENST00000585031 PSG11Q9UQ72 335 aa14.02□□□□□ -0.17
TOP3A-220ENST00000585031 TRBV5-7A0A0A0MS05 114 aa14.01□□□□□ -0.17
TOP3A-220ENST00000585031 IGKV1-12A0A0C4DH73 117 aa14.01□□□□□ -0.17
TOP3A-220ENST00000585031 LDLRAD4O15165 306 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms