RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 GPR141Q7Z602 305 aa7.88□□□□□ -1.15
CLK3-220ENST00000567992 LINC00311Q8N616 119 aa7.88□□□□□ -1.15
CLK3-220ENST00000567992 C8orf31Q8N9H6 132 aa7.88□□□□□ -1.15
CLK3-220ENST00000567992 OR56B1Q8NGI3 324 aa7.88□□□□□ -1.15
CLK3-220ENST00000567992 LGALS14Q8TCE9 139 aa7.88□□□□□ -1.15
CLK3-220ENST00000567992 KRTAP3-3Q9BYR6 98 aa7.88□□□□□ -1.15
CLK3-220ENST00000567992 KRTAP3-2Q9BYR7 98 aa7.88□□□□□ -1.15
CLK3-220ENST00000567992 PLEKHJ1Q9NW61 149 aa7.88□□□□□ -1.15
CLK3-220ENST00000567992 DAPK2Q9UIK4 370 aa7.88□□□□□ -1.15
CLK3-220ENST00000567992 MMP24Q9Y5R2 645 aa7.88□□□□□ -1.15
CLK3-220ENST00000567992 FBN3Q75N90 2809 aa7.88□□□□□ -1.15
CLK3-220ENST00000567992 A0A1W2PPI3 338 aa7.87□□□□□ -1.15
CLK3-220ENST00000567992 SPINT2O43291 252 aa7.87□□□□□ -1.15
CLK3-220ENST00000567992 SNRPBP14678 240 aaKnown RBP7.87□□□□□ -1.15
CLK3-220ENST00000567992 RANBP1P43487 201 aa7.87□□□□□ -1.15
CLK3-220ENST00000567992 TMEM30BQ3MIR4 351 aa7.87□□□□□ -1.15
CLK3-220ENST00000567992 TIMM50Q3ZCQ8 353 aa7.87□□□□□ -1.15
CLK3-220ENST00000567992 Q3ZCU0 254 aa7.87□□□□□ -1.15
CLK3-220ENST00000567992 DHRS7BQ6IAN0 325 aaPredicted RBP7.87□□□□□ -1.15
CLK3-220ENST00000567992 C12orf54Q6X4T0 127 aa7.87□□□□□ -1.15
CLK3-220ENST00000567992 LIAT1Q6ZQX7 453 aa7.87□□□□□ -1.15
CLK3-220ENST00000567992 Q6ZTK2 550 aa7.87□□□□□ -1.15
CLK3-220ENST00000567992 MOB1BQ7L9L4 216 aa7.87□□□□□ -1.15
CLK3-220ENST00000567992 PRR18Q8N4B5 295 aa7.87□□□□□ -1.15
CLK3-220ENST00000567992 OR10V1Q8NGI7 309 aa7.87□□□□□ -1.15
CLK3-220ENST00000567992 OR5H6Q8NGV6 325 aa7.87□□□□□ -1.15
CLK3-220ENST00000567992 OR10R2Q8NGX6 335 aa7.87□□□□□ -1.15
CLK3-220ENST00000567992 CFHR4Q92496 578 aa7.87□□□□□ -1.15
CLK3-220ENST00000567992 ST6GALNAC6Q969X2 333 aa7.87□□□□□ -1.15
CLK3-220ENST00000567992 CREB3L1Q96BA8 519 aa7.87□□□□□ -1.15
CLK3-220ENST00000567992 SLC25A38Q96DW6 304 aa7.87□□□□□ -1.15
CLK3-220ENST00000567992 FUNDC2Q9BWH2 189 aa7.87□□□□□ -1.15
CLK3-220ENST00000567992 C12orf4Q9NQ89 552 aa7.87□□□□□ -1.15
CLK3-220ENST00000567992 AMMECR1Q9Y4X0 333 aaPredicted RBP7.87□□□□□ -1.15
CLK3-220ENST00000567992 OOSP1A8MZH6 123 aa7.86□□□□□ -1.15
CLK3-220ENST00000567992 TSPAN9O75954 239 aa7.86□□□□□ -1.15
CLK3-220ENST00000567992 HIST1H1DP16402 221 aaKnown RBP7.86□□□□□ -1.15
CLK3-220ENST00000567992 GNB3P16520 340 aa7.86□□□□□ -1.15
CLK3-220ENST00000567992 CEACAM3P40198 252 aa7.86□□□□□ -1.15
CLK3-220ENST00000567992 ZNF137PP52743 207 aa7.86□□□□□ -1.15
CLK3-220ENST00000567992 NCS1P62166 190 aa7.86□□□□□ -1.15
CLK3-220ENST00000567992 LSM3P62310 102 aaKnown RBP7.86□□□□□ -1.15
CLK3-220ENST00000567992 HLA-DRB3P79483 266 aa7.86□□□□□ -1.15
CLK3-220ENST00000567992 HTD2P86397 168 aa7.86□□□□□ -1.15
CLK3-220ENST00000567992 MADCAM1Q13477 382 aa7.86□□□□□ -1.15
CLK3-220ENST00000567992 CT45A1Q5HYN5 189 aa7.86□□□□□ -1.15
CLK3-220ENST00000567992 SLC25A48Q6ZT89 311 aaKnown RBP7.86□□□□□ -1.15
CLK3-220ENST00000567992 TMEM219Q86XT9 240 aa7.86□□□□□ -1.15
CLK3-220ENST00000567992 OR52L2PQ8NGH6 319 aa7.86□□□□□ -1.15
CLK3-220ENST00000567992 OR4F5Q8NH21 305 aa7.86□□□□□ -1.15
CLK3-220ENST00000567992 CT45A3Q8NHU0 189 aa7.86□□□□□ -1.15
CLK3-220ENST00000567992 LINC01006Q8NI28 216 aa7.86□□□□□ -1.15
CLK3-220ENST00000567992 WFDC12Q8WWY7 111 aa7.86□□□□□ -1.15
CLK3-220ENST00000567992 RAB3CQ96E17 227 aa7.86□□□□□ -1.15
CLK3-220ENST00000567992 OCSTAMPQ9BR26 566 aa7.86□□□□□ -1.15
CLK3-220ENST00000567992 NAA50Q9GZZ1 169 aaKnown RBP7.86□□□□□ -1.15
CLK3-220ENST00000567992 RIMS4Q9H426 269 aaPredicted RBP7.86□□□□□ -1.15
CLK3-220ENST00000567992 C16orf95Q9H693 158 aa7.86□□□□□ -1.15
CLK3-220ENST00000567992 CHMP1AQ9HD42 196 aaPredicted RBP7.86□□□□□ -1.15
CLK3-220ENST00000567992 Q9N2K0 584 aa7.86□□□□□ -1.15
CLK3-220ENST00000567992 RAB9BQ9NP90 201 aa7.86□□□□□ -1.15
CLK3-220ENST00000567992 OR2S2Q9NQN1 319 aa7.86□□□□□ -1.15
CLK3-220ENST00000567992 ABCB10Q9NRK6 738 aa7.86□□□□□ -1.15
CLK3-220ENST00000567992 KCNIP1Q9NZI2 227 aa7.86□□□□□ -1.15
CLK3-220ENST00000567992 GNG12Q9UBI6 72 aa7.86□□□□□ -1.15
CLK3-220ENST00000567992 JPT1Q9UK76 154 aa7.86□□□□□ -1.15
CLK3-220ENST00000567992 NBEAL1Q6ZS30 2694 aa7.85□□□□□ -1.15
CLK3-220ENST00000567992 IGKV1-6A0A0C4DH72 117 aa7.85□□□□□ -1.15
CLK3-220ENST00000567992 CLPSL1A2RUU4 121 aa7.85□□□□□ -1.15
CLK3-220ENST00000567992 FAM90A9PA6NNJ1 464 aa7.85□□□□□ -1.15
CLK3-220ENST00000567992 POM121CA8CG34 1229 aa7.85□□□□□ -1.15
CLK3-220ENST00000567992 HSD17B6O14756 317 aa7.85□□□□□ -1.15
CLK3-220ENST00000567992 TIMM23O14925 209 aa7.85□□□□□ -1.15
CLK3-220ENST00000567992 CRYBA1P05813 215 aa7.85□□□□□ -1.15
CLK3-220ENST00000567992 CD24P25063 80 aa7.85□□□□□ -1.15
CLK3-220ENST00000567992 PPP1CCP36873 323 aaKnown RBP7.85□□□□□ -1.15
CLK3-220ENST00000567992 RPS19P39019 145 aaKnown RBP7.85□□□□□ -1.15
CLK3-220ENST00000567992 SCAND1P57086 179 aa7.85□□□□□ -1.15
CLK3-220ENST00000567992 PROK1P58294 105 aa7.85□□□□□ -1.15
CLK3-220ENST00000567992 KRTAP10-3P60369 221 aa7.85□□□□□ -1.15
CLK3-220ENST00000567992 ZNF816Q0VGE8 651 aaPredicted RBP7.85□□□□□ -1.15
CLK3-220ENST00000567992 HABP2Q14520 560 aaPredicted RBP7.85□□□□□ -1.15
CLK3-220ENST00000567992 HERPUD1Q15011 391 aa7.85□□□□□ -1.15
CLK3-220ENST00000567992 MORN2Q502X0 79 aa7.85□□□□□ -1.15
CLK3-220ENST00000567992 LY6G6FQ5SQ64 297 aa7.85□□□□□ -1.15
CLK3-220ENST00000567992 IDNKQ5T6J7 187 aa7.85□□□□□ -1.15
CLK3-220ENST00000567992 ODF3L1Q8IXM7 274 aa7.85□□□□□ -1.15
CLK3-220ENST00000567992 DRAM1Q8N682 238 aa7.85□□□□□ -1.15
CLK3-220ENST00000567992 OR10X1Q8NGY0 326 aa7.85□□□□□ -1.15
CLK3-220ENST00000567992 SETD6Q8TBK2 473 aa7.85□□□□□ -1.15
CLK3-220ENST00000567992 TOMM40LQ969M1 308 aa7.85□□□□□ -1.15
CLK3-220ENST00000567992 RPEQ96AT9 228 aa7.85□□□□□ -1.15
CLK3-220ENST00000567992 ISOC1Q96CN7 298 aa7.85□□□□□ -1.15
CLK3-220ENST00000567992 CMSS1Q9BQ75 279 aaKnown RBP7.85□□□□□ -1.15
CLK3-220ENST00000567992 ZNF747Q9BV97 191 aa7.85□□□□□ -1.15
CLK3-220ENST00000567992 PARP12Q9H0J9 701 aaKnown RBP7.85□□□□□ -1.15
CLK3-220ENST00000567992 RAB18Q9NP72 206 aa7.85□□□□□ -1.15
CLK3-220ENST00000567992 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.85□□□□□ -1.15
CLK3-220ENST00000567992 RHBDL2Q9NX52 303 aa7.85□□□□□ -1.15
CLK3-220ENST00000567992 ELF5Q9UKW6 265 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms