RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 SNRNP40Q96DI7 357 aaKnown RBP10.52□□□□□ -0.73
COL8A1-201ENST00000261037 CXorf1O96002 111 aa10.52□□□□□ -0.73
COL8A1-201ENST00000261037 CD82P27701 267 aa10.52□□□□□ -0.73
COL8A1-201ENST00000261037 GPR6P46095 362 aaPredicted RBP10.52□□□□□ -0.73
COL8A1-201ENST00000261037 SULT1A2P50226 295 aa10.52□□□□□ -0.73
COL8A1-201ENST00000261037 C8orf82Q6P1X6 216 aaPredicted RBP10.52□□□□□ -0.73
COL8A1-201ENST00000261037 TEPPQ6URK8 271 aa10.52□□□□□ -0.73
COL8A1-201ENST00000261037 GBGT1Q8N5D6 347 aa10.52□□□□□ -0.73
COL8A1-201ENST00000261037 LMX1BO60663 402 aa10.51□□□□□ -0.73
COL8A1-201ENST00000261037 ZNF519Q8TB69 540 aa10.51□□□□□ -0.73
COL8A1-201ENST00000261037 ZNF764Q96H86 408 aaPredicted RBP10.51□□□□□ -0.73
COL8A1-201ENST00000261037 ZNF714Q96N38 554 aa10.51□□□□□ -0.73
COL8A1-201ENST00000261037 OR2V2Q96R30 315 aa10.51□□□□□ -0.73
COL8A1-201ENST00000261037 IFT22Q9H7X7 185 aa10.51□□□□□ -0.73
COL8A1-201ENST00000261037 DOCK5Q9H7D0 1870 aa10.51□□□□□ -0.73
COL8A1-201ENST00000261037 FCGR3AP08637 254 aa10.51□□□□□ -0.73
COL8A1-201ENST00000261037 ZFP36L2P47974 494 aaKnown RBP10.51□□□□□ -0.73
COL8A1-201ENST00000261037 TWIST1Q15672 202 aa10.51□□□□□ -0.73
COL8A1-201ENST00000261037 LGALSLQ3ZCW2 172 aaPredicted RBP10.51□□□□□ -0.73
COL8A1-201ENST00000261037 DPPA3Q6W0C5 159 aa10.51□□□□□ -0.73
COL8A1-201ENST00000261037 ZNF826PQ6ZT77 177 aa10.51□□□□□ -0.73
COL8A1-201ENST00000261037 LINC00596Q86U02 117 aa10.51□□□□□ -0.73
COL8A1-201ENST00000261037 LYRM2Q9NU23 88 aaPredicted RBP10.51□□□□□ -0.73
COL8A1-201ENST00000261037 TNS1Q9HBL0 1735 aaKnown RBP10.51□□□□□ -0.73
COL8A1-201ENST00000261037 MDKP21741 143 aaPredicted RBP10.51□□□□□ -0.73
COL8A1-201ENST00000261037 OR1L8Q8NGR8 309 aa10.51□□□□□ -0.73
COL8A1-201ENST00000261037 H3BQ15 152 aa10.51□□□□□ -0.73
COL8A1-201ENST00000261037 NAT2P11245 290 aa10.51□□□□□ -0.73
COL8A1-201ENST00000261037 PMS2CLQ68D20 193 aa10.51□□□□□ -0.73
COL8A1-201ENST00000261037 OVCH2Q7RTZ1 564 aa10.51□□□□□ -0.73
COL8A1-201ENST00000261037 ZNF552Q9H707 407 aaPredicted RBP10.51□□□□□ -0.73
COL8A1-201ENST00000261037 IGKV3D-15A0A087WSY6 115 aa10.51□□□□□ -0.73
COL8A1-201ENST00000261037 TRBV5-3A0A0A0MS03 114 aa10.51□□□□□ -0.73
COL8A1-201ENST00000261037 IGKV1-8A0A0C4DH67 115 aa10.51□□□□□ -0.73
COL8A1-201ENST00000261037 AP4M1O00189 453 aa10.51□□□□□ -0.73
COL8A1-201ENST00000261037 CIDEAO60543 219 aa10.51□□□□□ -0.73
COL8A1-201ENST00000261037 IGKV3-15P01624 115 aa10.51□□□□□ -0.73
COL8A1-201ENST00000261037 PRF1P14222 555 aa10.51□□□□□ -0.73
COL8A1-201ENST00000261037 ATP1A1-AS1Q5TC04 95 aa10.51□□□□□ -0.73
COL8A1-201ENST00000261037 STPG1Q5TH74 334 aa10.51□□□□□ -0.73
COL8A1-201ENST00000261037 PACRGQ96M98 296 aaPredicted RBP10.51□□□□□ -0.73
COL8A1-201ENST00000261037 CHODLQ9H9P2 273 aa10.51□□□□□ -0.73
COL8A1-201ENST00000261037 IL36RNQ9UBH0 155 aa10.51□□□□□ -0.73
COL8A1-201ENST00000261037 CBY1Q9Y3M2 126 aa10.51□□□□□ -0.73
COL8A1-201ENST00000261037 IGHV3OR16-12A0A075B7B8 117 aa10.5□□□□□ -0.73
COL8A1-201ENST00000261037 A0A1B0GU03 582 aa10.5□□□□□ -0.73
COL8A1-201ENST00000261037 TMEM218A2RU14 115 aa10.5□□□□□ -0.73
COL8A1-201ENST00000261037 MFSD2BA6NFX1 497 aa10.5□□□□□ -0.73
COL8A1-201ENST00000261037 SNURFLB1AK76 121 aa10.5□□□□□ -0.73
COL8A1-201ENST00000261037 SMPD2O60906 423 aa10.5□□□□□ -0.73
COL8A1-201ENST00000261037 CYB5R3P00387 301 aaPredicted RBP10.5□□□□□ -0.73
COL8A1-201ENST00000261037 F12P00748 615 aaPredicted RBP10.5□□□□□ -0.73
COL8A1-201ENST00000261037 FTH1P19P0C7X4 201 aa10.5□□□□□ -0.73
COL8A1-201ENST00000261037 UCP2P55851 309 aa10.5□□□□□ -0.73
COL8A1-201ENST00000261037 HERVK_113P61574 105 aa10.5□□□□□ -0.73
COL8A1-201ENST00000261037 KCNMB1Q16558 191 aa10.5□□□□□ -0.73
COL8A1-201ENST00000261037 PTP4A3O75365 173 aa10.5□□□□□ -0.73
COL8A1-201ENST00000261037 PLAUP00749 431 aa10.5□□□□□ -0.73
COL8A1-201ENST00000261037 HIST1H1EP10412 219 aaKnown RBP10.5□□□□□ -0.73
COL8A1-201ENST00000261037 PRSS53Q2L4Q9 553 aa10.5□□□□□ -0.73
COL8A1-201ENST00000261037 PDE6DO43924 150 aa10.5□□□□□ -0.73
COL8A1-201ENST00000261037 ID1P41134 155 aa10.5□□□□□ -0.73
COL8A1-201ENST00000261037 GZMMP51124 257 aa10.5□□□□□ -0.73
COL8A1-201ENST00000261037 CLDN18P56856 261 aa10.5□□□□□ -0.73
COL8A1-201ENST00000261037 RUNX1Q01196 453 aa10.5□□□□□ -0.73
COL8A1-201ENST00000261037 IRF3Q14653 427 aa10.5□□□□□ -0.73
COL8A1-201ENST00000261037 HOGA1Q86XE5 327 aa10.5□□□□□ -0.73
COL8A1-201ENST00000261037 TMEM251Q8N6I4 163 aa10.5□□□□□ -0.73
COL8A1-201ENST00000261037 TRAF4Q9BUZ4 470 aaPredicted RBP10.5□□□□□ -0.73
COL8A1-201ENST00000261037 OPN4Q9UHM6 478 aa10.5□□□□□ -0.73
COL8A1-201ENST00000261037 K7N7A8 449 aa10.5□□□□□ -0.73
COL8A1-201ENST00000261037 PLA2G10O15496 165 aa10.5□□□□□ -0.73
COL8A1-201ENST00000261037 SLC35B1P78383 322 aa10.5□□□□□ -0.73
COL8A1-201ENST00000261037 ZNF79Q15937 498 aa10.5□□□□□ -0.73
COL8A1-201ENST00000261037 SPANXN1Q5VSR9 72 aa10.5□□□□□ -0.73
COL8A1-201ENST00000261037 PAXXQ9BUH6 204 aa10.5□□□□□ -0.73
COL8A1-201ENST00000261037 HBZP02008 142 aa10.49□□□□□ -0.73
COL8A1-201ENST00000261037 HOXA4Q00056 320 aaPredicted RBP10.49□□□□□ -0.73
COL8A1-201ENST00000261037 SIGIRRQ6IA17 410 aa10.49□□□□□ -0.73
COL8A1-201ENST00000261037 HCP5Q6MZN7 132 aa10.49□□□□□ -0.73
COL8A1-201ENST00000261037 GUCD1Q96NT3 240 aa10.49□□□□□ -0.73
COL8A1-201ENST00000261037 ANGPTL4Q9BY76 406 aa10.49□□□□□ -0.73
COL8A1-201ENST00000261037 TMEM191AQ9H0A3 160 aa10.49□□□□□ -0.73
COL8A1-201ENST00000261037 BET1LQ9NYM9 111 aa10.49□□□□□ -0.73
COL8A1-201ENST00000261037 A0A1W2PP11 408 aa10.49□□□□□ -0.73
COL8A1-201ENST00000261037 HIST1H1BP16401 226 aaKnown RBP10.49□□□□□ -0.73
COL8A1-201ENST00000261037 PNRC1Q12796 327 aaPredicted RBP10.49□□□□□ -0.73
COL8A1-201ENST00000261037 ITLN1Q8WWA0 313 aa10.49□□□□□ -0.73
COL8A1-201ENST00000261037 GHITMQ9H3K2 345 aa10.49□□□□□ -0.73
COL8A1-201ENST00000261037 METTL1Q9UBP6 276 aaKnown RBP10.49□□□□□ -0.73
COL8A1-201ENST00000261037 OR2H2O95918 312 aa10.49□□□□□ -0.73
COL8A1-201ENST00000261037 ATP6V0CP27449 155 aa10.49□□□□□ -0.73
COL8A1-201ENST00000261037 GUCA2BQ16661 112 aa10.49□□□□□ -0.73
COL8A1-201ENST00000261037 SMIM12Q96EX1 92 aa10.49□□□□□ -0.73
COL8A1-201ENST00000261037 CYB5R1Q9UHQ9 305 aa10.49□□□□□ -0.73
COL8A1-201ENST00000261037 PITX3O75364 302 aa10.49□□□□□ -0.73
COL8A1-201ENST00000261037 SCTP09683 121 aa10.49□□□□□ -0.73
COL8A1-201ENST00000261037 ROM1Q03395 351 aa10.49□□□□□ -0.73
COL8A1-201ENST00000261037 C7orf77A4D0Y5 90 aa10.49□□□□□ -0.73
COL8A1-201ENST00000261037 RAB29O14966 203 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms