RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 P58686 83 aa22.12■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Q149G0 166 aaKnown RBP22.12■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Tex30Q3TUU5 225 aa22.12■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Cdkl3Q8BLF2 595 aa22.12■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Nsun5Q8K4F6 465 aaKnown RBP22.12■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Ms4a4dQ99N05 225 aa22.12■■□□□ 1.13
Tpm1-216ENSMUST00000113707 SetxA2AKX3 2646 aa22.12■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Gm14597A2CFG5 200 aa22.11■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Gm43720E0CXM8 267 aa22.11■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Scd2P13011 358 aa22.11■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Olfr125Q14AJ9 320 aa22.11■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Fam57aQ5ND56 257 aa22.11■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Tob1Q61471 362 aa22.11■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Tle1Q62440 770 aa22.11■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Lhfpl2Q8BGA2 222 aa22.11■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Pear1Q8VIK5 1034 aa22.11■■□□□ 1.13
Tpm1-216ENSMUST00000113707 2610524H06RikQ9CZU9 139 aa22.11■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Snu13Q9D0T1 128 aaKnown RBP22.11■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Fancd2osQ9D4K4 178 aa22.11■■□□□ 1.13
Tpm1-216ENSMUST00000113707 BptfA2A654 3036 aaKnown RBP22.11■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Lyz2P08905 148 aa22.11■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Hspb1P14602 209 aaKnown RBP22.11■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Ppp1cbP62141 327 aa22.11■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Snai2P97469 269 aa22.11■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Mccc2Q3ULD5 563 aa22.11■■□□□ 1.13
Tpm1-216ENSMUST00000113707 ApoolQ78IK4 265 aa22.11■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Pramel5Q7TPY4 500 aa22.11■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Olfr1342Q8VFY3 315 aa22.11■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Olfr339Q8VGK8 309 aa22.11■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Rtn4ip1Q924D0 396 aa22.11■■□□□ 1.13
Tpm1-216ENSMUST00000113707 SdhdQ9CXV1 159 aa22.11■■□□□ 1.13
Tpm1-216ENSMUST00000113707 LitafQ9JLJ0 161 aa22.11■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Myo7bQ99MZ6 2113 aa22.11■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Gm8220F6YKI2 213 aa22.1■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Gm21761J3QK00 171 aa22.1■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Tnfrsf17O88472 185 aa22.1■■□□□ 1.13
Tpm1-216ENSMUST00000113707 DhfrP00375 187 aa22.1■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Cln5Q3UMW8 341 aa22.1■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Clns1aQ61189 236 aa22.1■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Plcxd1Q8CHS4 345 aa22.1■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Olfr469Q8VF66 314 aa22.1■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Olfr95Q8VFE2 312 aa22.1■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Sfxn3Q91V61 321 aa22.1■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Dph7Q9CYU6 477 aa22.1■■□□□ 1.13
Tpm1-216ENSMUST00000113707 B3GNT2Q9Z222 397 aa22.1■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Jmjd1cQ69ZK6 2350 aa22.1■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Trav15d-1-dv6d-1A0A075B624 124 aa22.09■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Olfr1179A2AUS6 307 aa22.09■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Htra4A2RT60 483 aa22.09■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Vmn1r14H3BJ46 303 aa22.09■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Tbx15O70306 602 aa22.09■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Ccr8P56484 353 aa22.09■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Ca10P61215 328 aa22.09■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Trav6-2Q5R1I4 113 aa22.09■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Zfp30Q60585 533 aa22.09■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Vmn1r37Q8R2E4 302 aa22.09■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Cisd2Q9CQB5 135 aaKnown RBP22.09■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Lingo1Q9D1T0 614 aa22.09■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Fbxw4Q9JMJ2 410 aa22.09■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Gm21294A0A087WS79 222 aa22.09■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Zfp942B8JJA7 486 aa22.09■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Arxes1C0HK79 180 aa22.09■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Arxes2C0HK80 180 aa22.09■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Wdr86D3Z757 380 aa22.09■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Rce1P57791 329 aa22.09■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Rab3cP62823 227 aa22.09■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Tubg1P83887 451 aaKnown RBP22.09■■□□□ 1.13
Tpm1-216ENSMUST00000113707 IslrQ6GU68 428 aa22.09■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Spred3Q6P6N5 408 aa22.09■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Rnd1Q8BLR7 232 aa22.09■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Smim3Q99PE5 60 aa22.09■■□□□ 1.13
Tpm1-216ENSMUST00000113707 CstadQ9D245 104 aa22.09■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Hacd1Q9QY80 281 aa22.09■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Mesp2O08574 370 aa22.08■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Klf9O35739 244 aa22.08■■□□□ 1.13
Tpm1-216ENSMUST00000113707 P04946 108 aa22.08■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Stfa2P35174 103 aa22.08■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Tbr1Q64336 681 aa22.08■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Utf1Q6J1H4 339 aa22.08■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Zfp947Q8BIQ6 437 aa22.08■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Arl6ip5Q8R5J9 188 aa22.08■■□□□ 1.13
Tpm1-216ENSMUST00000113707 Q8VE95 218 aa22.08■■□□□ 1.13
Tpm1-216ENSMUST00000113707 AplfQ9D842 499 aa22.08■■□□□ 1.13
Tpm1-216ENSMUST00000113707 A0A286YDM2 672 aa22.07■■□□□ 1.12
Tpm1-216ENSMUST00000113707 Mettl11bB2RXM4 283 aa22.07■■□□□ 1.12
Tpm1-216ENSMUST00000113707 Prdm14E9Q3T6 561 aa22.07■■□□□ 1.12
Tpm1-216ENSMUST00000113707 DhodhO35435 395 aa22.07■■□□□ 1.12
Tpm1-216ENSMUST00000113707 P01804 111 aa22.07■■□□□ 1.12
Tpm1-216ENSMUST00000113707 Apoc3P33622 99 aa22.07■■□□□ 1.12
Tpm1-216ENSMUST00000113707 ArsbP50429 534 aa22.07■■□□□ 1.12
Tpm1-216ENSMUST00000113707 Ufd1P70362 307 aa22.07■■□□□ 1.12
Tpm1-216ENSMUST00000113707 Hand1Q64279 216 aa22.07■■□□□ 1.12
Tpm1-216ENSMUST00000113707 Ykt6Q9CQW1 198 aa22.07■■□□□ 1.12
Tpm1-216ENSMUST00000113707 Cx3cr1Q9Z0D9 354 aa22.07■■□□□ 1.12
Tpm1-216ENSMUST00000113707 Ighv1-34A0A075B5V2 117 aa22.07■■□□□ 1.12
Tpm1-216ENSMUST00000113707 Slc17a3G3UWD9 498 aa22.07■■□□□ 1.12
Tpm1-216ENSMUST00000113707 CfdP03953 259 aa22.07■■□□□ 1.12
Tpm1-216ENSMUST00000113707 Pdcd6P12815 191 aaKnown RBP22.07■■□□□ 1.12
Tpm1-216ENSMUST00000113707 Aqp2P56402 271 aa22.07■■□□□ 1.12
Tpm1-216ENSMUST00000113707 Tspan5P62080 268 aa22.07■■□□□ 1.12
Retrieved 100 of 22,080 RNA–protein pairs in 33.2 ms