RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Zfp688E9Q5M9 274 aa14.21□□□□□ -0.13
Trim28-201ENSMUST00000005705 Olfr13P34984 310 aa14.21□□□□□ -0.13
Trim28-201ENSMUST00000005705 Nxph1Q61200 271 aa14.21□□□□□ -0.13
Trim28-201ENSMUST00000005705 Olfr361Q8VF16 322 aa14.21□□□□□ -0.13
Trim28-201ENSMUST00000005705 Dnajb11Q99KV1 358 aa14.21□□□□□ -0.13
Trim28-201ENSMUST00000005705 Elp5Q99L85 300 aa14.21□□□□□ -0.13
Trim28-201ENSMUST00000005705 GmfbQ9CQI3 142 aa14.21□□□□□ -0.13
Trim28-201ENSMUST00000005705 Enpp5Q9EQG7 477 aa14.21□□□□□ -0.13
Trim28-201ENSMUST00000005705 IckQ9JKV2 629 aa14.21□□□□□ -0.13
Trim28-201ENSMUST00000005705 Tnfrsf19Q9JLL3 416 aa14.21□□□□□ -0.13
Trim28-201ENSMUST00000005705 Prl3c1Q9QUN5 212 aa14.21□□□□□ -0.13
Trim28-201ENSMUST00000005705 Srsf10Q9R0U0 262 aaKnown RBP14.21□□□□□ -0.13
Trim28-201ENSMUST00000005705 Olfr1039A2ARY0 319 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 FaimlJ3QPY3 178 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 MdkP12025 140 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 Pax9P47242 342 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 OpalinQ7M750 143 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 Tsen54Q8C2A2 525 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 Vmn1r183Q8K3N5 305 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 Olfr639Q8VGY8 316 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 P2ry4Q9JJS7 361 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 Fam89bQ9QUI1 189 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 Olfr155Q9QZ22 319 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 CrebbpP45481 2441 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 Med13Q5SWW4 2171 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 Igkv1-135A0A0B4J1H7 120 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 Tmem200bD3Z0P8 284 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 Olfr628K7N6B2 316 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 Sh2b3O09039 548 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 H2-Ab1P01921 265 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 P06344 263 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 CebpbP28033 296 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 Ccr1l1P51676 356 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 Rab2aP53994 212 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 Fthl17dQ3SXD1 176 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 Nectin4Q8R007 508 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 Fthl17Q99MX2 176 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 Hspb2Q99PR8 182 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 Tomm20Q9DCC8 145 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 Olfr1150-ps1A0A1L1STL1 316 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 Gm4744D3Z3S5 154 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 Psg20E9Q9B4 475 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 Zfp2P08043 459 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 Il7rP16872 459 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 Gpm6aP35802 278 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 Efnb2P52800 336 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 Mfap2P55002 183 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 Nkain3Q3URJ8 181 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 Adat3Q6PAT0 349 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 Tas2r120Q7M721 295 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 Olfr851Q7TRG0 312 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 Olfr350Q8VFP8 312 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 PecrQ99MZ7 303 aa14.2□□□□□ -0.14
Trim28-201ENSMUST00000005705 Olfr554E9Q546 317 aa14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Olfr64F8VPZ8 307 aa14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Gm6526G3X9Q9 198 aa14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Cd200O54901 278 aa14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Gm9125P0DMR6 365 aa14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Rab18P35293 206 aa14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Calm5Q6W3E0 140 aa14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Olfr1477Q7TQQ7 315 aa14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Olfr1212Q7TR08 311 aa14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Rbm14Q8C2Q3 669 aaKnown RBP14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Ly6g6eQ8K1T6 166 aa14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Olfr472Q8VG43 310 aa14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Fscn3Q9QXW4 498 aa14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Abca7Q91V24 2159 aa14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Ighv1-54A0A075B5W5 117 aa14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Gm14444A2ARW3 426 aa14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Gm13769A2ATW2 309 aa14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 D430019H16RikJ3QPM6 83 aa14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Arg2O08691 354 aa14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Defa11P50709 85 aa14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Rps10P63325 165 aaKnown RBP14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Tmem71Q149F5 287 aa14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Wfdc6aQ3UW55 136 aa14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Zfp30Q60585 533 aa14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Sox19Q62249 55 aa14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Sema6dQ76KF0 1073 aa14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Olfr1002Q8VFK2 318 aa14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Gpr37Q9QY42 600 aa14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Tagln2Q9WVA4 199 aaKnown RBP14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Gm4881A0A140LIR9 352 aa14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Atf6bO35451 699 aa14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Zfp27P10077 819 aa14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Zfp36l2P23949 484 aaKnown RBP14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Isg20l2Q3U1G5 368 aaKnown RBP14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Cd300lbQ3U497 209 aa14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 St8sia1Q64687 355 aa14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Map6Q7TSJ2 906 aa14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Mrps26Q80ZS3 200 aa14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Actrt3Q8BXF8 369 aa14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Olfr340Q8VGL0 312 aa14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Mmp16Q9WTR0 607 aa14.19□□□□□ -0.14
Trim28-201ENSMUST00000005705 Fer1l4A3KGK3 1992 aa14.18□□□□□ -0.14
Trim28-201ENSMUST00000005705 Olfr69E9Q7C5 316 aa14.18□□□□□ -0.14
Trim28-201ENSMUST00000005705 Tex54G3UW99 86 aa14.18□□□□□ -0.14
Trim28-201ENSMUST00000005705 S100a15aQ6S5I3 108 aa14.18□□□□□ -0.14
Trim28-201ENSMUST00000005705 Srrm4Q8BKA3 608 aa14.18□□□□□ -0.14
Trim28-201ENSMUST00000005705 ManbalQ9D8X0 85 aa14.18□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 37.3 ms