RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 RND3P61587 244 aa9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 IL11RAQ14626 422 aa9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 ACER2Q5QJU3 275 aa9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 OR1B1Q8NGR6 318 aa9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 OR4C12Q96R67 309 aa9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 ABHD14AQ9BUJ0 271 aa9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 MFRPQ9BY79 579 aa9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 GAGE10A6NGK3 116 aa9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 UPK3AO75631 287 aa9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 TRGC1P0CF51 173 aa9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 NPY1RP25929 384 aa9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 CD82P27701 267 aa9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 PSMB2P49721 201 aa9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 LYZP61626 148 aa9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 SPATA45Q537H7 98 aa9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 OR5A2Q8NGI9 324 aa9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 COL25A1Q9BXS0 654 aaPredicted RBP9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 YBX2Q9Y2T7 364 aaKnown RBP9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 TNRC6CQ9HCJ0 1690 aaKnown RBP9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 CD8AP01732 235 aa9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 DANCRP0C864 163 aa9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 PPP1CCP36873 323 aaKnown RBP9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 SPEM1Q8N4L4 309 aa9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 OR52L2PQ8NGH6 319 aa9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 AQP3Q92482 292 aa9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 RPEQ96AT9 228 aa9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 PARD6GQ9BYG4 376 aaPredicted RBP9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 TMEM222Q9H0R3 208 aa9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 CARHSP1Q9Y2V2 147 aaKnown RBP9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 CDK5RAP2Q96SN8 1893 aa9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 CKAP5Q14008 2032 aa9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 RAB29O14966 203 aa9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 NDUFB4O95168 129 aa9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 IGHV3-13P01766 116 aa9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 IGHV3-7P01780 117 aa9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 GABRA6Q16445 453 aa9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 RHBDD2Q6NTF9 364 aa9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 P4HTMQ9NXG6 502 aa9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 THYN1Q9P016 225 aa9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 PRNDQ9UKY0 176 aa9.31□□□□□ -0.92
CLTCL1-209ENST00000617103 DXOO77932 396 aaKnown RBP9.3□□□□□ -0.92
CLTCL1-209ENST00000617103 HBZP02008 142 aa9.3□□□□□ -0.92
CLTCL1-209ENST00000617103 RBM11P57052 281 aaKnown RBP9.3□□□□□ -0.92
CLTCL1-209ENST00000617103 LINC00596Q86U02 117 aa9.3□□□□□ -0.92
CLTCL1-209ENST00000617103 RASL10BQ96S79 203 aa9.3□□□□□ -0.92
CLTCL1-209ENST00000617103 WFDC6Q9BQY6 131 aa9.3□□□□□ -0.92
CLTCL1-209ENST00000617103 CD1BP29016 333 aa9.3□□□□□ -0.92
CLTCL1-209ENST00000617103 OR8A1Q8NGG7 326 aa9.3□□□□□ -0.92
CLTCL1-209ENST00000617103 PERPQ96FX8 193 aa9.3□□□□□ -0.92
CLTCL1-209ENST00000617103 SLC25A33Q9BSK2 321 aa9.3□□□□□ -0.92
CLTCL1-209ENST00000617103 OR2H1Q9GZK4 316 aa9.3□□□□□ -0.92
CLTCL1-209ENST00000617103 GSN-AS1Q9NRJ2 163 aa9.3□□□□□ -0.92
CLTCL1-209ENST00000617103 ZFP30Q9Y2G7 519 aa9.3□□□□□ -0.92
CLTCL1-209ENST00000617103 CDIPTO14735 213 aa9.3□□□□□ -0.92
CLTCL1-209ENST00000617103 FUT5Q11128 374 aa9.3□□□□□ -0.92
CLTCL1-209ENST00000617103 SLC23A3Q6PIS1 610 aa9.3□□□□□ -0.92
CLTCL1-209ENST00000617103 CBLN4Q9NTU7 201 aa9.3□□□□□ -0.92
CLTCL1-209ENST00000617103 TMEM38BQ9NVV0 291 aa9.3□□□□□ -0.92
CLTCL1-209ENST00000617103 TRPM6Q9BX84 2022 aa9.3□□□□□ -0.92
CLTCL1-209ENST00000617103 PTPRZ1P23471 2315 aaPredicted RBP9.3□□□□□ -0.92
CLTCL1-209ENST00000617103 CCDC88CQ9P219 2028 aa9.3□□□□□ -0.92
CLTCL1-209ENST00000617103 A0A0U1RQV5 110 aa9.3□□□□□ -0.92
CLTCL1-209ENST00000617103 GLIPR1P48060 266 aa9.3□□□□□ -0.92
CLTCL1-209ENST00000617103 RNF122Q9H9V4 155 aa9.3□□□□□ -0.92
CLTCL1-209ENST00000617103 SAP30LQ9HAJ7 183 aa9.3□□□□□ -0.92
CLTCL1-209ENST00000617103 CLN8Q9UBY8 286 aa9.3□□□□□ -0.92
CLTCL1-209ENST00000617103 BTAF1O14981 1849 aa9.29□□□□□ -0.92
CLTCL1-209ENST00000617103 A0A1W2PP11 408 aa9.29□□□□□ -0.92
CLTCL1-209ENST00000617103 F5H697 171 aa9.29□□□□□ -0.92
CLTCL1-209ENST00000617103 H0Y980 276 aa9.29□□□□□ -0.92
CLTCL1-209ENST00000617103 MPDU1O75352 247 aa9.29□□□□□ -0.92
CLTCL1-209ENST00000617103 HLA-DQA1P01909 254 aa9.29□□□□□ -0.92
CLTCL1-209ENST00000617103 ISG15P05161 165 aa9.29□□□□□ -0.92
CLTCL1-209ENST00000617103 ZP1P60852 638 aa9.29□□□□□ -0.92
CLTCL1-209ENST00000617103 ZP4Q12836 540 aa9.29□□□□□ -0.92
CLTCL1-209ENST00000617103 SRSF9Q13242 221 aaKnown RBP eCLIP9.29□□□□□ -0.92
CLTCL1-209ENST00000617103 Q6ZS52 159 aa9.29□□□□□ -0.92
CLTCL1-209ENST00000617103 TMEM52Q8NDY8 209 aa9.29□□□□□ -0.92
CLTCL1-209ENST00000617103 CDC42EP3Q9UKI2 254 aa9.29□□□□□ -0.92
CLTCL1-209ENST00000617103 RALYQ9UKM9 306 aaKnown RBP9.29□□□□□ -0.92
CLTCL1-209ENST00000617103 FBLL1A6NHQ2 334 aaKnown RBP9.29□□□□□ -0.92
CLTCL1-209ENST00000617103 CD74P04233 296 aa9.29□□□□□ -0.92
CLTCL1-209ENST00000617103 HERVK_113P61574 105 aa9.29□□□□□ -0.92
CLTCL1-209ENST00000617103 SRSF5Q13243 272 aaKnown RBP9.29□□□□□ -0.92
CLTCL1-209ENST00000617103 TRA2AQ13595 282 aaKnown RBP eCLIP9.29□□□□□ -0.92
CLTCL1-209ENST00000617103 C10orf113Q5VZT2 155 aa9.29□□□□□ -0.92
CLTCL1-209ENST00000617103 WDR25Q64LD2 544 aaPredicted RBP9.29□□□□□ -0.92
CLTCL1-209ENST00000617103 C19orf48Q6RUI8 117 aa9.29□□□□□ -0.92
CLTCL1-209ENST00000617103 CADM4Q8NFZ8 388 aa9.29□□□□□ -0.92
CLTCL1-209ENST00000617103 OR4X1Q8NH49 305 aa9.29□□□□□ -0.92
CLTCL1-209ENST00000617103 AMELYQ99218 206 aa9.29□□□□□ -0.92
CLTCL1-209ENST00000617103 RARRES2Q99969 163 aa9.29□□□□□ -0.92
CLTCL1-209ENST00000617103 DTX4Q9Y2E6 619 aa9.29□□□□□ -0.92
CLTCL1-209ENST00000617103 CELA2BP08218 269 aaPredicted RBP9.29□□□□□ -0.92
CLTCL1-209ENST00000617103 MPLP40238 635 aa9.29□□□□□ -0.92
CLTCL1-209ENST00000617103 ID4P47928 161 aa9.29□□□□□ -0.92
CLTCL1-209ENST00000617103 LEMD1Q68G75 181 aa9.29□□□□□ -0.92
CLTCL1-209ENST00000617103 SLC35E4Q6ICL7 350 aa9.29□□□□□ -0.92
CLTCL1-209ENST00000617103 ZNF784Q8NCA9 323 aaPredicted RBP9.29□□□□□ -0.92
CLTCL1-209ENST00000617103 TM4SF19Q96DZ7 209 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms