RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 OR8U1Q8NH10 309 aa5.71□□□□□ -1.5
YBX3-209ENST00000540747 TOMM40LQ969M1 308 aa5.71□□□□□ -1.5
YBX3-209ENST00000540747 RPEQ96AT9 228 aa5.71□□□□□ -1.5
YBX3-209ENST00000540747 RCHY1Q96PM5 261 aa5.71□□□□□ -1.5
YBX3-209ENST00000540747 MND1Q9BWT6 205 aa5.71□□□□□ -1.5
YBX3-209ENST00000540747 PRRG3Q9BZD7 231 aa5.71□□□□□ -1.5
YBX3-209ENST00000540747 NXF2Q9GZY0 626 aaKnown RBP5.71□□□□□ -1.5
YBX3-209ENST00000540747 PPIL3Q9H2H8 161 aaKnown RBP5.71□□□□□ -1.5
YBX3-209ENST00000540747 PLEKHA1Q9HB21 404 aa5.71□□□□□ -1.5
YBX3-209ENST00000540747 PLSCR3Q9NRY6 295 aa5.71□□□□□ -1.5
YBX3-209ENST00000540747 GAR1Q9NY12 217 aaKnown RBP5.71□□□□□ -1.5
YBX3-209ENST00000540747 ZNF580Q9UK33 172 aa5.71□□□□□ -1.5
YBX3-209ENST00000540747 ZNF256Q9Y2P7 627 aaPredicted RBP5.71□□□□□ -1.5
YBX3-209ENST00000540747 A0A075B6Q4 140 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 A0A1W2PQL4 384 aaPredicted RBP5.7□□□□□ -1.5
YBX3-209ENST00000540747 SEC14L6B5MCN3 397 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 H3BSH0 61 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 BOLA2-SMG1P6H3BVE0 249 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 AP4M1O00189 453 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 TOR1AO14656 332 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 SH2D1BO14796 132 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 RPP14O95059 124 aaKnown RBP5.7□□□□□ -1.5
YBX3-209ENST00000540747 IL1AP01583 271 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 IGHG4P01861 327 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 ELANEP08246 267 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 TMEM11P17152 192 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 ATF1P18846 271 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 MYL12AP19105 171 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 PRKACBP22694 351 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 TGFBR1P36897 503 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 ECI1P42126 302 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 POU3F4P49335 361 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 RAB7AP51149 207 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 RORCP51449 518 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 SNU13P55769 128 aaKnown RBP5.7□□□□□ -1.5
YBX3-209ENST00000540747 MTCP1P56278 107 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 SLC35B1P78383 322 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 ZNF816Q0VGE8 651 aaPredicted RBP5.7□□□□□ -1.5
YBX3-209ENST00000540747 CBX3Q13185 183 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 MADCAM1Q13477 382 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 KIAA0141Q14154 515 aaPredicted RBP5.7□□□□□ -1.5
YBX3-209ENST00000540747 RBM39Q14498 530 aaKnown RBP5.7□□□□□ -1.5
YBX3-209ENST00000540747 SPHARQ15513 63 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 PNLIPRP3Q17RR3 467 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 ODF4Q2M2E3 257 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 SLC25A30Q5SVS4 291 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 TEX38Q6PEX7 206 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 LHFPL2Q6ZUX7 228 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 TGIF2LXQ8IUE1 241 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 SBSPONQ8IVN8 264 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 IZUMO1Q8IYV9 350 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 SAXO1Q8IYX7 474 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 RDH10Q8IZV5 341 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 NANOGP1Q8N7R0 232 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 Q8N9W7 124 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 TMEM104Q8NE00 496 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 Q8NFD4 153 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 OR13A1Q8NGR1 328 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 TMEM163Q8TC26 289 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 C4orf3Q8WVX3 66 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 SPSB1Q96BD6 273 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 ABCG5Q9H222 651 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 RHOFQ9HBH0 211 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 LIN7CQ9NUP9 197 aaKnown RBP5.7□□□□□ -1.5
YBX3-209ENST00000540747 CALYQ9NYX4 217 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 OR6C3Q9NZP0 311 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 H2AFY2Q9P0M6 372 aaPredicted RBP5.7□□□□□ -1.5
YBX3-209ENST00000540747 GLS2Q9UI32 602 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 PAIP2BQ9ULR5 123 aaKnown RBP5.7□□□□□ -1.5
YBX3-209ENST00000540747 PSG11Q9UQ72 335 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 GSTK1Q9Y2Q3 226 aa5.7□□□□□ -1.5
YBX3-209ENST00000540747 AMMECR1Q9Y4X0 333 aaPredicted RBP5.7□□□□□ -1.5
YBX3-209ENST00000540747 TRAV24A0A0B4J272 114 aa5.69□□□□□ -1.5
YBX3-209ENST00000540747 GPX5O75715 221 aa5.69□□□□□ -1.5
YBX3-209ENST00000540747 CYB5AP00167 134 aa5.69□□□□□ -1.5
YBX3-209ENST00000540747 SERPINA3P01011 423 aa5.69□□□□□ -1.5
YBX3-209ENST00000540747 IGKV1D-33P01593 117 aa5.69□□□□□ -1.5
YBX3-209ENST00000540747 IGKV1-33P01594 117 aa5.69□□□□□ -1.5
YBX3-209ENST00000540747 KRT8P05787 483 aa5.69□□□□□ -1.5
YBX3-209ENST00000540747 OR2T7P0C7T2 308 aa5.69□□□□□ -1.5
YBX3-209ENST00000540747 UBCP0CG48 685 aaKnown RBP5.69□□□□□ -1.5
YBX3-209ENST00000540747 NFYBP25208 207 aa5.69□□□□□ -1.5
YBX3-209ENST00000540747 PSMB8P28062 276 aa5.69□□□□□ -1.5
YBX3-209ENST00000540747 EIF2B2P49770 351 aaKnown RBP5.69□□□□□ -1.5
YBX3-209ENST00000540747 ZP1P60852 638 aa5.69□□□□□ -1.5
YBX3-209ENST00000540747 RUNX1Q01196 453 aa5.69□□□□□ -1.5
YBX3-209ENST00000540747 IFITM3Q01628 133 aa5.69□□□□□ -1.5
YBX3-209ENST00000540747 MLLT11Q13015 90 aaPredicted RBP5.69□□□□□ -1.5
YBX3-209ENST00000540747 GPR50Q13585 617 aa5.69□□□□□ -1.5
YBX3-209ENST00000540747 HNF4GQ14541 408 aa5.69□□□□□ -1.5
YBX3-209ENST00000540747 ATXN7L3Q14CW9 347 aaPredicted RBP5.69□□□□□ -1.5
YBX3-209ENST00000540747 KRBOX4Q5JUW0 171 aa5.69□□□□□ -1.5
YBX3-209ENST00000540747 RSBN1Q5VWQ0 802 aaPredicted RBP5.69□□□□□ -1.5
YBX3-209ENST00000540747 FDX2Q6P4F2 183 aa5.69□□□□□ -1.5
YBX3-209ENST00000540747 LYSMD2Q8IV50 215 aa5.69□□□□□ -1.5
YBX3-209ENST00000540747 FOXRED2Q8IWF2 684 aa5.69□□□□□ -1.5
YBX3-209ENST00000540747 FAM71E2Q8N5Q1 922 aa5.69□□□□□ -1.5
YBX3-209ENST00000540747 PARP16Q8N5Y8 322 aa5.69□□□□□ -1.5
YBX3-209ENST00000540747 YIPF7Q8N8F6 280 aa5.69□□□□□ -1.5
YBX3-209ENST00000540747 OR10A7Q8NGE5 316 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms