RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 ZNF22P17026 224 aaPredicted RBP1.2□□□□□ -2.22
CCDC7-209ENST00000539197 CNTFRP26992 372 aa1.2□□□□□ -2.22
CCDC7-209ENST00000539197 ELK4P28324 431 aa1.2□□□□□ -2.22
CCDC7-209ENST00000539197 MP68P56378 58 aa1.2□□□□□ -2.22
CCDC7-209ENST00000539197 RHOAP61586 193 aa1.2□□□□□ -2.22
CCDC7-209ENST00000539197 PSG4Q00888 419 aa1.2□□□□□ -2.22
CCDC7-209ENST00000539197 ZNHIT3Q15649 155 aaPredicted RBP1.2□□□□□ -2.22
CCDC7-209ENST00000539197 TMEM249Q2WGJ8 235 aa1.2□□□□□ -2.22
CCDC7-209ENST00000539197 TMEM176BQ3YBM2 270 aaPredicted RBP1.2□□□□□ -2.22
CCDC7-209ENST00000539197 PYCR3Q53H96 274 aa1.2□□□□□ -2.22
CCDC7-209ENST00000539197 FAM162BQ5T6X4 162 aa1.2□□□□□ -2.22
CCDC7-209ENST00000539197 PDPK2PQ6A1A2 396 aa1.2□□□□□ -2.22
CCDC7-209ENST00000539197 SSX7Q7RTT5 188 aa1.2□□□□□ -2.22
CCDC7-209ENST00000539197 OLIG3Q7RTU3 272 aa1.2□□□□□ -2.22
CCDC7-209ENST00000539197 CRLF3Q8IUI8 442 aa1.2□□□□□ -2.22
CCDC7-209ENST00000539197 BLIDQ8IZY5 108 aa1.2□□□□□ -2.22
CCDC7-209ENST00000539197 ACBD4Q8NC06 268 aa1.2□□□□□ -2.22
CCDC7-209ENST00000539197 OR11L1Q8NGX0 322 aa1.2□□□□□ -2.22
CCDC7-209ENST00000539197 OR4A5Q8NH83 315 aa1.2□□□□□ -2.22
CCDC7-209ENST00000539197 OR2V1Q8NHB1 315 aa1.2□□□□□ -2.22
CCDC7-209ENST00000539197 MFSD8Q8NHS3 518 aa1.2□□□□□ -2.22
CCDC7-209ENST00000539197 RNASE11Q8TAA1 199 aaKnown RBP1.2□□□□□ -2.22
CCDC7-209ENST00000539197 DYNC2LI1Q8TCX1 351 aa1.2□□□□□ -2.22
CCDC7-209ENST00000539197 LMX1AQ8TE12 382 aa1.2□□□□□ -2.22
CCDC7-209ENST00000539197 CASTOR1Q8WTX7 329 aa1.2□□□□□ -2.22
CCDC7-209ENST00000539197 CCDC12Q8WUD4 166 aaPredicted RBP1.2□□□□□ -2.22
CCDC7-209ENST00000539197 REEP6Q96HR9 211 aa1.2□□□□□ -2.22
CCDC7-209ENST00000539197 TRNT1Q96Q11 434 aaKnown RBP1.2□□□□□ -2.22
CCDC7-209ENST00000539197 EBPLQ9BY08 206 aa1.2□□□□□ -2.22
CCDC7-209ENST00000539197 UPF3BQ9BZI7 483 aaKnown RBP1.2□□□□□ -2.22
CCDC7-209ENST00000539197 ASCL3Q9NQ33 180 aa1.2□□□□□ -2.22
CCDC7-209ENST00000539197 EURLQ9NYK6 297 aa1.2□□□□□ -2.22
CCDC7-209ENST00000539197 NOS1P29475 1434 aa1.2□□□□□ -2.22
CCDC7-209ENST00000539197 POLR3AO14802 1390 aaPredicted RBP1.2□□□□□ -2.22
CCDC7-209ENST00000539197 LRPPRCP42704 1394 aaKnown RBP1.2□□□□□ -2.22
CCDC7-209ENST00000539197 ADAMTSL3P82987 1691 aa1.2□□□□□ -2.22
CCDC7-209ENST00000539197 MAP3K19Q56UN5 1328 aa1.19□□□□□ -2.22
CCDC7-209ENST00000539197 A0A1B0GTI1 187 aa1.19□□□□□ -2.22
CCDC7-209ENST00000539197 EFCAB9A8MZ26 197 aa1.19□□□□□ -2.22
CCDC7-209ENST00000539197 C9J4A7 227 aa1.19□□□□□ -2.22
CCDC7-209ENST00000539197 F5H5T6 163 aa1.19□□□□□ -2.22
CCDC7-209ENST00000539197 F8VZ95 297 aa1.19□□□□□ -2.22
CCDC7-209ENST00000539197 TOR1AO14656 332 aa1.19□□□□□ -2.22
CCDC7-209ENST00000539197 CALUO43852 315 aaPredicted RBP1.19□□□□□ -2.22
CCDC7-209ENST00000539197 CDK14O94921 469 aa1.19□□□□□ -2.22
CCDC7-209ENST00000539197 S1PR2O95136 353 aa1.19□□□□□ -2.22
CCDC7-209ENST00000539197 RAB36O95755 333 aa1.19□□□□□ -2.22
CCDC7-209ENST00000539197 GPR75O95800 540 aa1.19□□□□□ -2.22
CCDC7-209ENST00000539197 EVI2BP34910 448 aa1.19□□□□□ -2.22
CCDC7-209ENST00000539197 CBX5P45973 191 aa1.19□□□□□ -2.22
CCDC7-209ENST00000539197 UBE2G2P60604 165 aa1.19□□□□□ -2.22
CCDC7-209ENST00000539197 RAB8AP61006 207 aa1.19□□□□□ -2.22
CCDC7-209ENST00000539197 RAB2AP61019 212 aa1.19□□□□□ -2.22
CCDC7-209ENST00000539197 SKP1P63208 163 aa1.19□□□□□ -2.22
CCDC7-209ENST00000539197 PRDX4Q13162 271 aa1.19□□□□□ -2.22
CCDC7-209ENST00000539197 SPIN4Q56A73 249 aa1.19□□□□□ -2.22
CCDC7-209ENST00000539197 ACSBG2Q5FVE4 666 aa1.19□□□□□ -2.22
CCDC7-209ENST00000539197 OTUD6BQ8N6M0 293 aa1.19□□□□□ -2.22
CCDC7-209ENST00000539197 ATP6V1C2Q8NEY4 427 aa1.19□□□□□ -2.22
CCDC7-209ENST00000539197 OR7G1Q8NGA0 311 aa1.19□□□□□ -2.22
CCDC7-209ENST00000539197 ZNRF2Q8NHG8 242 aa1.19□□□□□ -2.22
CCDC7-209ENST00000539197 CLDN23Q96B33 292 aa1.19□□□□□ -2.22
CCDC7-209ENST00000539197 LRRC45Q96CN5 670 aa1.19□□□□□ -2.22
CCDC7-209ENST00000539197 HBEGFQ99075 208 aa1.19□□□□□ -2.22
CCDC7-209ENST00000539197 ZNF251Q9BRH9 671 aa1.19□□□□□ -2.22
CCDC7-209ENST00000539197 POTEKPQ9BYX7 375 aa1.19□□□□□ -2.22
CCDC7-209ENST00000539197 DMAC2Q9NW81 257 aa1.19□□□□□ -2.22
CCDC7-209ENST00000539197 C1orf109Q9NX04 203 aa1.19□□□□□ -2.22
CCDC7-209ENST00000539197 OR5V1Q9UGF6 321 aa1.19□□□□□ -2.22
CCDC7-209ENST00000539197 KIAA0232Q92628 1395 aa1.19□□□□□ -2.22
CCDC7-209ENST00000539197 USP42Q9H9J4 1324 aaKnown RBP1.18□□□□□ -2.22
CCDC7-209ENST00000539197 ATRNO75882 1429 aa1.18□□□□□ -2.22
CCDC7-209ENST00000539197 TRBV24-1A0A075B6N3 115 aa1.18□□□□□ -2.22
CCDC7-209ENST00000539197 FABP12A6NFH5 140 aa1.18□□□□□ -2.22
CCDC7-209ENST00000539197 OR5H14A6NHG9 310 aa1.18□□□□□ -2.22
CCDC7-209ENST00000539197 ARGFXA6NJG6 315 aa1.18□□□□□ -2.22
CCDC7-209ENST00000539197 TMEM250H0YL14 139 aa1.18□□□□□ -2.22
CCDC7-209ENST00000539197 KLRC4-KLRK1H3BQV0 150 aa1.18□□□□□ -2.22
CCDC7-209ENST00000539197 GOLGA8RI6L899 631 aa1.18□□□□□ -2.22
CCDC7-209ENST00000539197 PDYNP01213 254 aa1.18□□□□□ -2.22
CCDC7-209ENST00000539197 GUSBP08236 651 aa1.18□□□□□ -2.22
CCDC7-209ENST00000539197 CTLA4P16410 223 aa1.18□□□□□ -2.22
CCDC7-209ENST00000539197 AKR1C4P17516 323 aa1.18□□□□□ -2.22
CCDC7-209ENST00000539197 ATF1P18846 271 aa1.18□□□□□ -2.22
CCDC7-209ENST00000539197 PVALBP20472 110 aaPredicted RBP1.18□□□□□ -2.22
CCDC7-209ENST00000539197 PSMB6P28072 239 aa1.18□□□□□ -2.22
CCDC7-209ENST00000539197 GRPRP30550 384 aa1.18□□□□□ -2.22
CCDC7-209ENST00000539197 ACTR1BP42025 376 aa1.18□□□□□ -2.22
CCDC7-209ENST00000539197 SULT1A2P50226 295 aa1.18□□□□□ -2.22
CCDC7-209ENST00000539197 STC1P52823 247 aa1.18□□□□□ -2.22
CCDC7-209ENST00000539197 DLX6P56179 175 aa1.18□□□□□ -2.22
CCDC7-209ENST00000539197 C1QTNF8P60827 252 aa1.18□□□□□ -2.22
CCDC7-209ENST00000539197 DEFA6Q01524 100 aa1.18□□□□□ -2.22
CCDC7-209ENST00000539197 CASP8Q14790 479 aa1.18□□□□□ -2.22
CCDC7-209ENST00000539197 HES3Q5TGS1 186 aa1.18□□□□□ -2.22
CCDC7-209ENST00000539197 CLEC6AQ6EIG7 209 aa1.18□□□□□ -2.22
CCDC7-209ENST00000539197 NIPAL1Q6NVV3 410 aa1.18□□□□□ -2.22
CCDC7-209ENST00000539197 ZNF767PQ75MW2 155 aa1.18□□□□□ -2.22
CCDC7-209ENST00000539197 TCF23Q7RTU1 214 aa1.18□□□□□ -2.22
CCDC7-209ENST00000539197 MUC15Q8N387 334 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms