RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 PLSCR3Q9NRY6 295 aa14.45□□□□□ -0.1
HDAC6-231ENST00000488905 SORL1Q92673 2214 aa14.44□□□□□ -0.1
HDAC6-231ENST00000488905 A0A1W2PP11 408 aa14.44□□□□□ -0.1
HDAC6-231ENST00000488905 SLC31A2O15432 143 aa14.44□□□□□ -0.1
HDAC6-231ENST00000488905 TXNL1O43396 289 aa14.44□□□□□ -0.1
HDAC6-231ENST00000488905 ZNF780AO75290 641 aaPredicted RBP14.44□□□□□ -0.1
HDAC6-231ENST00000488905 ELANEP08246 267 aa14.44□□□□□ -0.1
HDAC6-231ENST00000488905 CDX1P47902 265 aaPredicted RBP14.44□□□□□ -0.1
HDAC6-231ENST00000488905 RIPK1Q13546 671 aa14.44□□□□□ -0.1
HDAC6-231ENST00000488905 FAM71E2Q8N5Q1 922 aa14.44□□□□□ -0.1
HDAC6-231ENST00000488905 OR5M8Q8NGP6 311 aa14.44□□□□□ -0.1
HDAC6-231ENST00000488905 ORAI1Q96D31 301 aa14.44□□□□□ -0.1
HDAC6-231ENST00000488905 SMIM19Q96E16 107 aa14.44□□□□□ -0.1
HDAC6-231ENST00000488905 S1PR3Q99500 378 aa14.44□□□□□ -0.1
HDAC6-231ENST00000488905 ZNF184Q99676 751 aaPredicted RBP14.44□□□□□ -0.1
HDAC6-231ENST00000488905 RASL11BQ9BPW5 248 aa14.44□□□□□ -0.1
HDAC6-231ENST00000488905 HSPB9Q9BQS6 159 aa14.44□□□□□ -0.1
HDAC6-231ENST00000488905 FGF20Q9NP95 211 aaPredicted RBP14.44□□□□□ -0.1
HDAC6-231ENST00000488905 MT-ND4P03905 459 aa14.43□□□□□ -0.1
HDAC6-231ENST00000488905 GTF2F2P13984 249 aa14.43□□□□□ -0.1
HDAC6-231ENST00000488905 ETV1P50549 477 aa14.43□□□□□ -0.1
HDAC6-231ENST00000488905 ZNF137PP52743 207 aa14.43□□□□□ -0.1
HDAC6-231ENST00000488905 CFHR3Q02985 330 aa14.43□□□□□ -0.1
HDAC6-231ENST00000488905 KIR2DS1Q14954 304 aa14.43□□□□□ -0.1
HDAC6-231ENST00000488905 SMN1Q16637 294 aaKnown RBP14.43□□□□□ -0.1
HDAC6-231ENST00000488905 SLC22A6Q4U2R8 563 aa14.43□□□□□ -0.1
HDAC6-231ENST00000488905 C9orf66Q5T8R8 295 aa14.43□□□□□ -0.1
HDAC6-231ENST00000488905 OR2G6Q5TZ20 316 aa14.43□□□□□ -0.1
HDAC6-231ENST00000488905 SLC25A48Q6ZT89 311 aaKnown RBP14.43□□□□□ -0.1
HDAC6-231ENST00000488905 STX19Q8N4C7 294 aa14.43□□□□□ -0.1
HDAC6-231ENST00000488905 ZNF439Q8NDP4 499 aa14.43□□□□□ -0.1
HDAC6-231ENST00000488905 OR8H1Q8NGG4 311 aa14.43□□□□□ -0.1
HDAC6-231ENST00000488905 OR13C5Q8NGS8 318 aa14.43□□□□□ -0.1
HDAC6-231ENST00000488905 SLC29A1Q99808 456 aa14.43□□□□□ -0.1
HDAC6-231ENST00000488905 RCC2Q9P258 522 aaKnown RBP14.43□□□□□ -0.1
HDAC6-231ENST00000488905 SIRT4Q9Y6E7 314 aaPredicted RBP14.43□□□□□ -0.1
HDAC6-231ENST00000488905 MAGEA13PA6NCF6 341 aa14.42□□□□□ -0.1
HDAC6-231ENST00000488905 ZNF736B4DX44 427 aaPredicted RBP14.42□□□□□ -0.1
HDAC6-231ENST00000488905 C12orf77C9JDV5 145 aa14.42□□□□□ -0.1
HDAC6-231ENST00000488905 IGFBP3P17936 291 aaPredicted RBP14.42□□□□□ -0.1
HDAC6-231ENST00000488905 VDAC1P21796 283 aa14.42□□□□□ -0.1
HDAC6-231ENST00000488905 DCKP27707 260 aa14.42□□□□□ -0.1
HDAC6-231ENST00000488905 TMEM30BQ3MIR4 351 aa14.42□□□□□ -0.1
HDAC6-231ENST00000488905 TMPRSS11AQ6ZMR5 421 aa14.42□□□□□ -0.1
HDAC6-231ENST00000488905 C4orf3Q8WVX3 66 aa14.42□□□□□ -0.1
HDAC6-231ENST00000488905 PRR25Q96S07 402 aa14.42□□□□□ -0.1
HDAC6-231ENST00000488905 SPACA1Q9HBV2 294 aa14.42□□□□□ -0.1
HDAC6-231ENST00000488905 RAB9BQ9NP90 201 aa14.42□□□□□ -0.1
HDAC6-231ENST00000488905 GNG12Q9UBI6 72 aa14.42□□□□□ -0.1
HDAC6-231ENST00000488905 SPINT2O43291 252 aa14.41□□□□□ -0.1
HDAC6-231ENST00000488905 WBP4O75554 376 aaKnown RBP14.41□□□□□ -0.1
HDAC6-231ENST00000488905 IGHG4P01861 327 aa14.41□□□□□ -0.1
HDAC6-231ENST00000488905 NHLRC4P0CG21 123 aaPredicted RBP14.41□□□□□ -0.1
HDAC6-231ENST00000488905 SOX6P35712 828 aa14.41□□□□□ -0.1
HDAC6-231ENST00000488905 FHL3Q13643 280 aa14.41□□□□□ -0.1
HDAC6-231ENST00000488905 SYT6Q5T7P8 510 aaPredicted RBP14.41□□□□□ -0.1
HDAC6-231ENST00000488905 ZNF580Q9UK33 172 aa14.41□□□□□ -0.1
HDAC6-231ENST00000488905 TRAPPC2LQ9UL33 140 aa14.41□□□□□ -0.1
HDAC6-231ENST00000488905 LSM4Q9Y4Z0 139 aaKnown RBP14.41□□□□□ -0.1
HDAC6-231ENST00000488905 TRBV5-5A0A0J9YX44 114 aa14.4□□□□□ -0.1
HDAC6-231ENST00000488905 SEC14L6B5MCN3 397 aa14.4□□□□□ -0.1
HDAC6-231ENST00000488905 OGG1O15527 345 aa14.4□□□□□ -0.1
HDAC6-231ENST00000488905 LALBAP00709 142 aa14.4□□□□□ -0.1
HDAC6-231ENST00000488905 IGF1P05019 195 aa14.4□□□□□ -0.1
HDAC6-231ENST00000488905 FSTP19883 344 aa14.4□□□□□ -0.1
HDAC6-231ENST00000488905 PSMB8P28062 276 aa14.4□□□□□ -0.1
HDAC6-231ENST00000488905 F2RL1P55085 397 aa14.4□□□□□ -0.1
HDAC6-231ENST00000488905 GPR176Q14439 515 aa14.4□□□□□ -0.1
HDAC6-231ENST00000488905 C6orf183Q5T699 404 aa14.4□□□□□ -0.1
HDAC6-231ENST00000488905 PRR18Q8N4B5 295 aa14.4□□□□□ -0.1
HDAC6-231ENST00000488905 OR10V1Q8NGI7 309 aa14.4□□□□□ -0.1
HDAC6-231ENST00000488905 OR4K15Q8NH41 348 aa14.4□□□□□ -0.1
HDAC6-231ENST00000488905 RBMXL1Q96E39 390 aaKnown RBP14.4□□□□□ -0.1
HDAC6-231ENST00000488905 ETAA1Q9NY74 926 aa14.4□□□□□ -0.1
HDAC6-231ENST00000488905 CKLFQ9UBR5 152 aa14.4□□□□□ -0.1
HDAC6-231ENST00000488905 U3KQK5 164 aa14.4□□□□□ -0.1
HDAC6-231ENST00000488905 DYNC2H1Q8NCM8 4307 aaKnown RBP14.39□□□□□ -0.11
HDAC6-231ENST00000488905 TRAV8-7A0A075B6U6 113 aa14.39□□□□□ -0.11
HDAC6-231ENST00000488905 MCRIP1C9JLW8 97 aa14.39□□□□□ -0.11
HDAC6-231ENST00000488905 HBZP02008 142 aa14.39□□□□□ -0.11
HDAC6-231ENST00000488905 OR5H8P0DN80 308 aa14.39□□□□□ -0.11
HDAC6-231ENST00000488905 MYL12AP19105 171 aa14.39□□□□□ -0.11
HDAC6-231ENST00000488905 VHLP40337 213 aa14.39□□□□□ -0.11
HDAC6-231ENST00000488905 ZNF134P52741 427 aa14.39□□□□□ -0.11
HDAC6-231ENST00000488905 LSAMPQ13449 338 aa14.39□□□□□ -0.11
HDAC6-231ENST00000488905 Q499Y3 187 aa14.39□□□□□ -0.11
HDAC6-231ENST00000488905 CT45A1Q5HYN5 189 aa14.39□□□□□ -0.11
HDAC6-231ENST00000488905 NKAPLQ5M9Q1 402 aa14.39□□□□□ -0.11
HDAC6-231ENST00000488905 RAB12Q6IQ22 244 aa14.39□□□□□ -0.11
HDAC6-231ENST00000488905 TRAT1Q6PIZ9 186 aa14.39□□□□□ -0.11
HDAC6-231ENST00000488905 GAPTQ8N292 157 aa14.39□□□□□ -0.11
HDAC6-231ENST00000488905 OR1L1Q8NH94 360 aa14.39□□□□□ -0.11
HDAC6-231ENST00000488905 CT45A3Q8NHU0 189 aa14.39□□□□□ -0.11
HDAC6-231ENST00000488905 MUL1Q969V5 352 aa14.39□□□□□ -0.11
HDAC6-231ENST00000488905 KCTD7Q96MP8 289 aa14.39□□□□□ -0.11
HDAC6-231ENST00000488905 BABAM2Q9NXR7 383 aa14.39□□□□□ -0.11
HDAC6-231ENST00000488905 ZNF107Q9UII5 783 aaPredicted RBP14.39□□□□□ -0.11
HDAC6-231ENST00000488905 DIMT1Q9UNQ2 313 aaKnown RBP14.39□□□□□ -0.11
HDAC6-231ENST00000488905 MRPS28Q9Y2Q9 187 aaKnown RBP14.39□□□□□ -0.11
HDAC6-231ENST00000488905 IRGMA1A4Y4 181 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms