RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 GABRA3P34903 492 aa0.72□□□□□ -2.29
RBM39-228ENST00000471635 HSPA13P48723 471 aa0.72□□□□□ -2.29
RBM39-228ENST00000471635 XIAPP98170 497 aa0.72□□□□□ -2.29
RBM39-228ENST00000471635 CD164Q04900 197 aa0.72□□□□□ -2.29
RBM39-228ENST00000471635 VAMP3Q15836 100 aa0.72□□□□□ -2.29
RBM39-228ENST00000471635 TCAIMQ8N3R3 496 aa0.72□□□□□ -2.29
RBM39-228ENST00000471635 C2orf73Q8N5S3 287 aaPredicted RBP0.72□□□□□ -2.29
RBM39-228ENST00000471635 OR9I1Q8NGQ6 314 aa0.72□□□□□ -2.29
RBM39-228ENST00000471635 ERMNQ8TAM6 284 aa0.72□□□□□ -2.29
RBM39-228ENST00000471635 CIDECQ96AQ7 238 aaPredicted RBP0.72□□□□□ -2.29
RBM39-228ENST00000471635 LRRC39Q96DD0 335 aa0.72□□□□□ -2.29
RBM39-228ENST00000471635 PGLYRP3Q96LB9 341 aa0.72□□□□□ -2.29
RBM39-228ENST00000471635 OR52B2Q96RD2 323 aa0.72□□□□□ -2.29
RBM39-228ENST00000471635 TAPBPLQ9BX59 468 aa0.72□□□□□ -2.29
RBM39-228ENST00000471635 BCL2L14Q9BZR8 327 aa0.72□□□□□ -2.29
RBM39-228ENST00000471635 SLC19A3Q9BZV2 496 aa0.72□□□□□ -2.29
RBM39-228ENST00000471635 C16orf95Q9H693 158 aa0.72□□□□□ -2.29
RBM39-228ENST00000471635 USH1CQ9Y6N9 552 aa0.72□□□□□ -2.29
RBM39-228ENST00000471635 ZNF638Q14966 1978 aaKnown RBP0.72□□□□□ -2.29
RBM39-228ENST00000471635 TNIKQ9UKE5 1360 aa0.71□□□□□ -2.3
RBM39-228ENST00000471635 ADAMTSL1Q8N6G6 1762 aa0.71□□□□□ -2.3
RBM39-228ENST00000471635 IGKV2-29A2NJV5 120 aaPredicted RBP0.71□□□□□ -2.3
RBM39-228ENST00000471635 PLPP3O14495 311 aa0.71□□□□□ -2.3
RBM39-228ENST00000471635 TOR1AO14656 332 aa0.71□□□□□ -2.3
RBM39-228ENST00000471635 POLR3GO15318 223 aaPredicted RBP0.71□□□□□ -2.3
RBM39-228ENST00000471635 SOD1P00441 154 aa0.71□□□□□ -2.3
RBM39-228ENST00000471635 RPA3P35244 121 aaPredicted RBP0.71□□□□□ -2.3
RBM39-228ENST00000471635 SPAM1P38567 509 aa0.71□□□□□ -2.3
RBM39-228ENST00000471635 MAGEA3P43357 314 aa0.71□□□□□ -2.3
RBM39-228ENST00000471635 AQP5P55064 265 aa0.71□□□□□ -2.3
RBM39-228ENST00000471635 OR2B6P58173 313 aa0.71□□□□□ -2.3
RBM39-228ENST00000471635 C1QTNF8P60827 252 aa0.71□□□□□ -2.3
RBM39-228ENST00000471635 DEFA6Q01524 100 aa0.71□□□□□ -2.3
RBM39-228ENST00000471635 ZNF117Q03924 483 aa0.71□□□□□ -2.3
RBM39-228ENST00000471635 BSPH1Q075Z2 132 aa0.71□□□□□ -2.3
RBM39-228ENST00000471635 TPRXLQ17RH7 258 aa0.71□□□□□ -2.3
RBM39-228ENST00000471635 OR2Y1Q8NGV0 311 aa0.71□□□□□ -2.3
RBM39-228ENST00000471635 DCANP1Q8TF63 244 aa0.71□□□□□ -2.3
RBM39-228ENST00000471635 GLT1D1Q96MS3 346 aa0.71□□□□□ -2.3
RBM39-228ENST00000471635 UPK3BQ9BT76 320 aa0.71□□□□□ -2.3
RBM39-228ENST00000471635 IFT46Q9NQC8 304 aa0.71□□□□□ -2.3
RBM39-228ENST00000471635 NXT1Q9UKK6 140 aaKnown RBP0.71□□□□□ -2.3
RBM39-228ENST00000471635 RBMX2Q9Y388 322 aaKnown RBP0.71□□□□□ -2.3
RBM39-228ENST00000471635 WASHC3Q9Y3C0 194 aa0.71□□□□□ -2.3
RBM39-228ENST00000471635 PTPRJQ12913 1337 aa0.7□□□□□ -2.3
RBM39-228ENST00000471635 NCKAP5O14513 1909 aa0.7□□□□□ -2.3
RBM39-228ENST00000471635 PXDNLA1KZ92 1463 aa0.7□□□□□ -2.3
RBM39-228ENST00000471635 F8VP50 259 aa0.7□□□□□ -2.3
RBM39-228ENST00000471635 OR4A8P0C604 315 aa0.7□□□□□ -2.3
RBM39-228ENST00000471635 GZMBP10144 247 aa0.7□□□□□ -2.3
RBM39-228ENST00000471635 RWDD2BP57060 319 aa0.7□□□□□ -2.3
RBM39-228ENST00000471635 VSNL1P62760 191 aa0.7□□□□□ -2.3
RBM39-228ENST00000471635 PDGFRLQ15198 375 aa0.7□□□□□ -2.3
RBM39-228ENST00000471635 C18orf21Q32NC0 220 aaPredicted RBP0.7□□□□□ -2.3
RBM39-228ENST00000471635 N4BP2L1Q5TBK1 243 aaPredicted RBP0.7□□□□□ -2.3
RBM39-228ENST00000471635 LGALS9CQ6DKI2 356 aa0.7□□□□□ -2.3
RBM39-228ENST00000471635 EBLN2Q6P2I7 272 aa0.7□□□□□ -2.3
RBM39-228ENST00000471635 CDRT4Q8N9R6 151 aa0.7□□□□□ -2.3
RBM39-228ENST00000471635 ZNRF2Q8NHG8 242 aa0.7□□□□□ -2.3
RBM39-228ENST00000471635 GTF2H4Q92759 462 aa0.7□□□□□ -2.3
RBM39-228ENST00000471635 TMBIM1Q969X1 311 aa0.7□□□□□ -2.3
RBM39-228ENST00000471635 FAAP24Q9BTP7 215 aa0.7□□□□□ -2.3
RBM39-228ENST00000471635 PRRG3Q9BZD7 231 aa0.7□□□□□ -2.3
RBM39-228ENST00000471635 SMDT1Q9H4I9 107 aa0.7□□□□□ -2.3
RBM39-228ENST00000471635 C11orf49Q9H6J7 331 aa0.7□□□□□ -2.3
RBM39-228ENST00000471635 MAT2BQ9NZL9 334 aa0.7□□□□□ -2.3
RBM39-228ENST00000471635 CCDC88CQ9P219 2028 aa0.7□□□□□ -2.3
RBM39-228ENST00000471635 ATAD5Q96QE3 1844 aa0.7□□□□□ -2.3
RBM39-228ENST00000471635 RAB3GAP2Q9H2M9 1393 aa0.7□□□□□ -2.3
RBM39-228ENST00000471635 FN1P02751 2386 aaKnown RBP0.69□□□□□ -2.3
RBM39-228ENST00000471635 DNMT1P26358 1616 aaKnown RBP0.69□□□□□ -2.3
RBM39-228ENST00000471635 IGKV1D-43A0A0B4J1Z2 117 aa0.69□□□□□ -2.3
RBM39-228ENST00000471635 A0A1B0GW15 77 aa0.69□□□□□ -2.3
RBM39-228ENST00000471635 K7EQS6 105 aa0.69□□□□□ -2.3
RBM39-228ENST00000471635 PSMD11O00231 422 aa0.69□□□□□ -2.3
RBM39-228ENST00000471635 IGHV3-30-3P0DP02 117 aa0.69□□□□□ -2.3
RBM39-228ENST00000471635 NQO1P15559 274 aaKnown RBP0.69□□□□□ -2.3
RBM39-228ENST00000471635 CARD18P57730 90 aa0.69□□□□□ -2.3
RBM39-228ENST00000471635 UBE2KP61086 200 aa0.69□□□□□ -2.3
RBM39-228ENST00000471635 TSPAN5P62079 268 aa0.69□□□□□ -2.3
RBM39-228ENST00000471635 DYNLL1P63167 89 aaKnown RBP0.69□□□□□ -2.3
RBM39-228ENST00000471635 SKP2Q13309 424 aa0.69□□□□□ -2.3
RBM39-228ENST00000471635 SSX6Q7RTT6 188 aa0.69□□□□□ -2.3
RBM39-228ENST00000471635 TRIML2Q8N7C3 387 aa0.69□□□□□ -2.3
RBM39-228ENST00000471635 YIPF7Q8N8F6 280 aa0.69□□□□□ -2.3
RBM39-228ENST00000471635 ACBD4Q8NC06 268 aa0.69□□□□□ -2.3
RBM39-228ENST00000471635 OR5D18Q8NGL1 313 aa0.69□□□□□ -2.3
RBM39-228ENST00000471635 OR11L1Q8NGX0 322 aa0.69□□□□□ -2.3
RBM39-228ENST00000471635 FAM45AQ8TCE6 357 aa0.69□□□□□ -2.3
RBM39-228ENST00000471635 DTD1Q8TEA8 209 aa0.69□□□□□ -2.3
RBM39-228ENST00000471635 NAP1L5Q96NT1 182 aaPredicted RBP0.69□□□□□ -2.3
RBM39-228ENST00000471635 Q9BRP9 147 aa0.69□□□□□ -2.3
RBM39-228ENST00000471635 C1QTNF6Q9BXI9 259 aa0.69□□□□□ -2.3
RBM39-228ENST00000471635 RAB1BQ9H0U4 201 aa0.69□□□□□ -2.3
RBM39-228ENST00000471635 OR51E2Q9H255 320 aa0.69□□□□□ -2.3
RBM39-228ENST00000471635 RGS12O14924 1447 aa0.69□□□□□ -2.3
RBM39-228ENST00000471635 PLCH2O75038 1416 aa0.69□□□□□ -2.3
RBM39-228ENST00000471635 MYO5BQ9ULV0 1848 aa0.68□□□□□ -2.3
RBM39-228ENST00000471635 RAB19A4D1S5 217 aa0.68□□□□□ -2.3
RBM39-228ENST00000471635 B4DEV8 164 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms