RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 CDX1P47902 265 aaPredicted RBP13.53□□□□□ -0.24
TRIM56-203ENST00000467847 SLC22A6Q4U2R8 563 aa13.53□□□□□ -0.24
TRIM56-203ENST00000467847 CCDC58Q4VC31 144 aa13.53□□□□□ -0.24
TRIM56-203ENST00000467847 C9orf66Q5T8R8 295 aa13.53□□□□□ -0.24
TRIM56-203ENST00000467847 STX19Q8N4C7 294 aa13.53□□□□□ -0.24
TRIM56-203ENST00000467847 RNF152Q8N8N0 203 aa13.53□□□□□ -0.24
TRIM56-203ENST00000467847 OR8H1Q8NGG4 311 aa13.53□□□□□ -0.24
TRIM56-203ENST00000467847 PRR25Q96S07 402 aa13.53□□□□□ -0.24
TRIM56-203ENST00000467847 STAB2Q8WWQ8 2551 aa13.52□□□□□ -0.24
TRIM56-203ENST00000467847 ZNF736B4DX44 427 aaPredicted RBP13.52□□□□□ -0.25
TRIM56-203ENST00000467847 SLC31A2O15432 143 aa13.52□□□□□ -0.25
TRIM56-203ENST00000467847 TXNL1O43396 289 aa13.52□□□□□ -0.25
TRIM56-203ENST00000467847 ZNF780AO75290 641 aaPredicted RBP13.52□□□□□ -0.25
TRIM56-203ENST00000467847 GTF2F2P13984 249 aa13.52□□□□□ -0.25
TRIM56-203ENST00000467847 VDAC1P21796 283 aa13.52□□□□□ -0.25
TRIM56-203ENST00000467847 SOX6P35712 828 aa13.52□□□□□ -0.25
TRIM56-203ENST00000467847 RIPK1Q13546 671 aa13.52□□□□□ -0.25
TRIM56-203ENST00000467847 Q3ZCU0 254 aa13.52□□□□□ -0.25
TRIM56-203ENST00000467847 APH1BQ8WW43 257 aa13.52□□□□□ -0.25
TRIM56-203ENST00000467847 ORAI1Q96D31 301 aa13.52□□□□□ -0.25
TRIM56-203ENST00000467847 HSPB9Q9BQS6 159 aa13.52□□□□□ -0.25
TRIM56-203ENST00000467847 C9orf16Q9BUW7 83 aa13.52□□□□□ -0.25
TRIM56-203ENST00000467847 GNG12Q9UBI6 72 aa13.52□□□□□ -0.25
TRIM56-203ENST00000467847 U3KQK5 164 aa13.52□□□□□ -0.25
TRIM56-203ENST00000467847 A0A1W2PP11 408 aa13.51□□□□□ -0.25
TRIM56-203ENST00000467847 SEC14L6B5MCN3 397 aa13.51□□□□□ -0.25
TRIM56-203ENST00000467847 C12orf77C9JDV5 145 aa13.51□□□□□ -0.25
TRIM56-203ENST00000467847 IGHG4P01861 327 aa13.51□□□□□ -0.25
TRIM56-203ENST00000467847 ECI1P42126 302 aa13.51□□□□□ -0.25
TRIM56-203ENST00000467847 ETV1P50549 477 aa13.51□□□□□ -0.25
TRIM56-203ENST00000467847 F2RL1P55085 397 aa13.51□□□□□ -0.25
TRIM56-203ENST00000467847 CFHR3Q02985 330 aa13.51□□□□□ -0.25
TRIM56-203ENST00000467847 OR2G6Q5TZ20 316 aa13.51□□□□□ -0.25
TRIM56-203ENST00000467847 TMPRSS11AQ6ZMR5 421 aa13.51□□□□□ -0.25
TRIM56-203ENST00000467847 SLC25A48Q6ZT89 311 aaKnown RBP13.51□□□□□ -0.25
TRIM56-203ENST00000467847 FAM71E2Q8N5Q1 922 aa13.51□□□□□ -0.25
TRIM56-203ENST00000467847 C4orf3Q8WVX3 66 aa13.51□□□□□ -0.25
TRIM56-203ENST00000467847 ZNF184Q99676 751 aaPredicted RBP13.51□□□□□ -0.25
TRIM56-203ENST00000467847 SLC29A1Q99808 456 aa13.51□□□□□ -0.25
TRIM56-203ENST00000467847 SPACA1Q9HBV2 294 aa13.51□□□□□ -0.25
TRIM56-203ENST00000467847 FGF20Q9NP95 211 aaPredicted RBP13.51□□□□□ -0.25
TRIM56-203ENST00000467847 TRAPPC2LQ9UL33 140 aa13.51□□□□□ -0.25
TRIM56-203ENST00000467847 LSM4Q9Y4Z0 139 aaKnown RBP13.51□□□□□ -0.25
TRIM56-203ENST00000467847 SPINT2O43291 252 aa13.5□□□□□ -0.25
TRIM56-203ENST00000467847 GPR176Q14439 515 aa13.5□□□□□ -0.25
TRIM56-203ENST00000467847 SMN1Q16637 294 aaKnown RBP13.5□□□□□ -0.25
TRIM56-203ENST00000467847 SYT6Q5T7P8 510 aaPredicted RBP13.5□□□□□ -0.25
TRIM56-203ENST00000467847 PRR18Q8N4B5 295 aa13.5□□□□□ -0.25
TRIM56-203ENST00000467847 ZNF439Q8NDP4 499 aa13.5□□□□□ -0.25
TRIM56-203ENST00000467847 OR10V1Q8NGI7 309 aa13.5□□□□□ -0.25
TRIM56-203ENST00000467847 OR13C5Q8NGS8 318 aa13.5□□□□□ -0.25
TRIM56-203ENST00000467847 SMIM19Q96E16 107 aa13.5□□□□□ -0.25
TRIM56-203ENST00000467847 RBMXL1Q96E39 390 aaKnown RBP13.5□□□□□ -0.25
TRIM56-203ENST00000467847 RAB9BQ9NP90 201 aa13.5□□□□□ -0.25
TRIM56-203ENST00000467847 CKLFQ9UBR5 152 aa13.5□□□□□ -0.25
TRIM56-203ENST00000467847 SIRT4Q9Y6E7 314 aaPredicted RBP13.5□□□□□ -0.25
TRIM56-203ENST00000467847 MAGEA13PA6NCF6 341 aa13.49□□□□□ -0.25
TRIM56-203ENST00000467847 MCRIP1C9JLW8 97 aa13.49□□□□□ -0.25
TRIM56-203ENST00000467847 IGF1P05019 195 aa13.49□□□□□ -0.25
TRIM56-203ENST00000467847 DCKP27707 260 aa13.49□□□□□ -0.25
TRIM56-203ENST00000467847 ZNF134P52741 427 aa13.49□□□□□ -0.25
TRIM56-203ENST00000467847 ZNF137PP52743 207 aa13.49□□□□□ -0.25
TRIM56-203ENST00000467847 TMEM30BQ3MIR4 351 aa13.49□□□□□ -0.25
TRIM56-203ENST00000467847 CT45A1Q5HYN5 189 aa13.49□□□□□ -0.25
TRIM56-203ENST00000467847 NKAPLQ5M9Q1 402 aa13.49□□□□□ -0.25
TRIM56-203ENST00000467847 C6orf183Q5T699 404 aa13.49□□□□□ -0.25
TRIM56-203ENST00000467847 OR4K15Q8NH41 348 aa13.49□□□□□ -0.25
TRIM56-203ENST00000467847 CT45A3Q8NHU0 189 aa13.49□□□□□ -0.25
TRIM56-203ENST00000467847 KCTD7Q96MP8 289 aa13.49□□□□□ -0.25
TRIM56-203ENST00000467847 BABAM2Q9NXR7 383 aa13.49□□□□□ -0.25
TRIM56-203ENST00000467847 ETAA1Q9NY74 926 aa13.49□□□□□ -0.25
TRIM56-203ENST00000467847 RCC2Q9P258 522 aaKnown RBP13.49□□□□□ -0.25
TRIM56-203ENST00000467847 ZNF107Q9UII5 783 aaPredicted RBP13.49□□□□□ -0.25
TRIM56-203ENST00000467847 SCOCQ9UIL1 159 aa13.49□□□□□ -0.25
TRIM56-203ENST00000467847 OGG1O15527 345 aa13.48□□□□□ -0.25
TRIM56-203ENST00000467847 WBP4O75554 376 aaKnown RBP13.48□□□□□ -0.25
TRIM56-203ENST00000467847 HBZP02008 142 aa13.48□□□□□ -0.25
TRIM56-203ENST00000467847 OR5H8P0DN80 308 aa13.48□□□□□ -0.25
TRIM56-203ENST00000467847 SLC2A2P11168 524 aaPredicted RBP13.48□□□□□ -0.25
TRIM56-203ENST00000467847 IGFBP3P17936 291 aaPredicted RBP13.48□□□□□ -0.25
TRIM56-203ENST00000467847 PSMB8P28062 276 aa13.48□□□□□ -0.25
TRIM56-203ENST00000467847 FHL3Q13643 280 aa13.48□□□□□ -0.25
TRIM56-203ENST00000467847 ZNF260Q3ZCT1 412 aa13.48□□□□□ -0.25
TRIM56-203ENST00000467847 RAB12Q6IQ22 244 aa13.48□□□□□ -0.25
TRIM56-203ENST00000467847 OR11H1Q8NG94 326 aa13.48□□□□□ -0.25
TRIM56-203ENST00000467847 OR1L1Q8NH94 360 aa13.48□□□□□ -0.25
TRIM56-203ENST00000467847 GHSRQ92847 366 aa13.48□□□□□ -0.25
TRIM56-203ENST00000467847 MUL1Q969V5 352 aa13.48□□□□□ -0.25
TRIM56-203ENST00000467847 ZNF580Q9UK33 172 aa13.48□□□□□ -0.25
TRIM56-203ENST00000467847 MRPS28Q9Y2Q9 187 aaKnown RBP13.48□□□□□ -0.25
TRIM56-203ENST00000467847 SORL1Q92673 2214 aa13.48□□□□□ -0.25
TRIM56-203ENST00000467847 TRBV5-5A0A0J9YX44 114 aa13.47□□□□□ -0.25
TRIM56-203ENST00000467847 MYL12AP19105 171 aa13.47□□□□□ -0.25
TRIM56-203ENST00000467847 MYF6P23409 242 aa13.47□□□□□ -0.25
TRIM56-203ENST00000467847 VHLP40337 213 aa13.47□□□□□ -0.25
TRIM56-203ENST00000467847 LSAMPQ13449 338 aa13.47□□□□□ -0.25
TRIM56-203ENST00000467847 MMDQ15546 238 aa13.47□□□□□ -0.25
TRIM56-203ENST00000467847 TMEM65Q6PI78 240 aa13.47□□□□□ -0.25
TRIM56-203ENST00000467847 TRAT1Q6PIZ9 186 aa13.47□□□□□ -0.25
TRIM56-203ENST00000467847 GLIPR1L1Q6UWM5 242 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms