RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, human

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQB2-231	ENST00000435145	RHEB	Q15382	184 aa		13.63	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	TGIF1	Q15583	401 aa		13.63	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	TBC1D28	Q2M2D7	210 aa		13.63	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	SPATA46	Q5T0L3	261 aa		13.63	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	DHRS13	Q6UX07	377 aa		13.63	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	LSM10	Q969L4	123 aa	Known RBP	13.63	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	ATP5S	Q99766	215 aa		13.63	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	KCNJ16	Q9NPI9	418 aa		13.63	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	DNAJC13	O75165	2243 aa		13.63	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	GPR179	Q6PRD1	2367 aa		13.63	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145		M0R296	226 aa		13.63	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	SLC33A1	O00400	549 aa	Predicted RBP	13.63	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	SMPD2	O60906	423 aa		13.63	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	PSG2	P11465	335 aa		13.63	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	IGFBP7	Q16270	282 aa		13.63	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	HES3	Q5TGS1	186 aa		13.63	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	MYPOP	Q86VE0	399 aa	Predicted RBP	13.63	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	COA4	Q9NYJ1	87 aa		13.63	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	KIAA1456	Q9P272	454 aa		13.63	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145		A0A1W2PR80	420 aa		13.62	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	TXNL1	O43396	289 aa		13.62	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	IGKV1-39	P01597	117 aa		13.62	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	IGKV1D-39	P04432	117 aa		13.62	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	IFNA4	P05014	189 aa		13.62	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	SERPINE2	P07093	398 aa		13.62	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	SNRNP70	P08621	437 aa	Known RBP	13.62	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	PTAFR	P25105	342 aa		13.62	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	ZNF154	Q13106	437 aa		13.62	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	SCCPDH	Q8NBX0	429 aa		13.62	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	OR1J1	Q8NGS3	322 aa		13.62	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	GMPPA	Q96IJ6	420 aa	Predicted RBP	13.62	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	RAB40C	Q96S21	281 aa		13.62	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	MBNL3	Q9NUK0	354 aa	Known RBP	13.62	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	POLDIP2	Q9Y2S7	368 aa		13.62	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	RBFOX3	A6NFN3	312 aa		13.61	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	ZNF98	A6NK75	572 aa		13.61	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	CDRT15L2	A8MXV6	281 aa		13.61	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	WRB	O00258	174 aa		13.61	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	OR2H2	O95918	312 aa		13.61	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	CELA3B	P08861	270 aa		13.61	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	PGA5	P0DJD9	388 aa		13.61	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	SOX8	P57073	446 aa		13.61	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	PPP1CB	P62140	327 aa		13.61	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	ZNF146	Q15072	292 aa		13.61	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	ZNF766	Q5HY98	468 aa		13.61	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	DPPA3	Q6W0C5	159 aa		13.61	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145		Q6ZRM9	215 aa		13.61	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	OR51H1	Q8NH63	302 aa		13.61	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	RARRES2	Q99969	163 aa		13.61	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	WIPI2	Q9Y4P8	454 aa		13.61	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145		M0R036	132 aa		13.61	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	GPR37	O15354	613 aa		13.61	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	SULT1A1	P50225	295 aa		13.61	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	TAS2R30	P59541	319 aa		13.61	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	RAB5B	P61020	215 aa		13.61	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	AKIRIN2	Q53H80	203 aa		13.61	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	IQCF2	Q8IXL9	164 aa		13.61	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	TMEM217	Q8N7C4	229 aa		13.61	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	WSB1	Q9Y6I7	421 aa		13.61	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	DFFB	O76075	338 aa		13.6	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	NXPH3	O95157	252 aa		13.6	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	ACAA1	P09110	424 aa	Predicted RBP	13.6	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	AGA	P20933	346 aa		13.6	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	MAS1L	P35410	378 aa		13.6	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	RPL35	P42766	123 aa	Known RBP	13.6	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	RUNX1	Q01196	453 aa		13.6	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	ATP1A1-AS1	Q5TC04	95 aa		13.6	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	ZFP82	Q8N141	532 aa		13.6	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	C2CD4C	Q8TF44	421 aa		13.6	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	SFT2D1	Q8WV19	159 aa		13.6	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	IL1F10	Q8WWZ1	152 aa		13.6	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	OR2J1	Q9GZK6	312 aa		13.6	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145		A0A1B0GV50	99 aa		13.59	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	IQCF6	A8MYZ5	107 aa		13.59	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	SIRPB1	O00241	398 aa		13.59	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	IGKV1-5	P01602	117 aa		13.59	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	OR13C7	P0DN81	318 aa		13.59	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	RAC2	P15153	192 aa		13.59	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	IGHV1-2	P23083	117 aa		13.59	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	CD200	P41217	278 aa		13.59	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	RPL23A	P62750	156 aa	Known RBP	13.59	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	MRPL49	Q13405	166 aa	Known RBP	13.59	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	GABRA6	Q16445	453 aa		13.59	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	ZNF585B	Q52M93	769 aa		13.59	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	SOHLH1	Q5JUK2	328 aa		13.59	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	STX12	Q86Y82	276 aa		13.59	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	TMEM178A	Q8NBL3	297 aa		13.59	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	CLCF1	Q9UBD9	225 aa		13.59	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	TRAV1-1	A0A0B4J248	108 aa		13.59	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	TRAV39	A0A0B4J263	110 aa		13.59	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	C1orf196	B1AJZ1	125 aa		13.59	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	C1QTNF9B	B2RNN3	333 aa		13.59	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	AKR1D1	P51857	326 aa		13.59	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	ARG2	P78540	354 aa		13.59	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	YPEL4	Q96NS1	127 aa		13.59	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	C20orf24	Q9BUV8	137 aa		13.59	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	CDH20	Q9HBT6	801 aa		13.59	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	HES4	Q9HCC6	221 aa		13.59	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	ESPL1	Q14674	2120 aa		13.58	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145		A0A1W2PPH5	198 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms