RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 USF3Q68DE3 2245 aa13.46□□□□□ -0.25
C9orf78-201ENST00000372447 RNF222A6NCQ9 220 aa13.45□□□□□ -0.26
C9orf78-201ENST00000372447 TRDCB7Z8K6 153 aa13.45□□□□□ -0.26
C9orf78-201ENST00000372447 OVOL3O00110 214 aa13.45□□□□□ -0.26
C9orf78-201ENST00000372447 TK1P04183 234 aa13.45□□□□□ -0.26
C9orf78-201ENST00000372447 GRPP07492 148 aa13.45□□□□□ -0.26
C9orf78-201ENST00000372447 HOXB5P09067 269 aa13.45□□□□□ -0.26
C9orf78-201ENST00000372447 SCTP09683 121 aa13.45□□□□□ -0.26
C9orf78-201ENST00000372447 PGA5P0DJD9 388 aa13.45□□□□□ -0.26
C9orf78-201ENST00000372447 ZNF44P15621 663 aa13.45□□□□□ -0.26
C9orf78-201ENST00000372447 CDKN1AP38936 164 aa13.45□□□□□ -0.26
C9orf78-201ENST00000372447 Q6ZR03 302 aa13.45□□□□□ -0.26
C9orf78-201ENST00000372447 POC1AQ8NBT0 407 aa13.45□□□□□ -0.26
C9orf78-201ENST00000372447 INO80EQ8NBZ0 244 aaPredicted RBP13.45□□□□□ -0.26
C9orf78-201ENST00000372447 MRPL30Q8TCC3 161 aaKnown RBP13.45□□□□□ -0.26
C9orf78-201ENST00000372447 GALNT14Q96FL9 552 aa13.45□□□□□ -0.26
C9orf78-201ENST00000372447 CITED4Q96RK1 184 aa13.45□□□□□ -0.26
C9orf78-201ENST00000372447 NRIP2Q9BQI9 281 aa13.45□□□□□ -0.26
C9orf78-201ENST00000372447 RSRP1Q9BUV0 290 aa13.45□□□□□ -0.26
C9orf78-201ENST00000372447 MSL2Q9HCI7 577 aa13.45□□□□□ -0.26
C9orf78-201ENST00000372447 SLC2A9Q9NRM0 540 aa13.45□□□□□ -0.26
C9orf78-201ENST00000372447 NOTCH2Q04721 2471 aa13.45□□□□□ -0.26
C9orf78-201ENST00000372447 NAV2Q8IVL1 2488 aa13.45□□□□□ -0.26
C9orf78-201ENST00000372447 TRBV6-7A0A0A0MS04 114 aa13.45□□□□□ -0.26
C9orf78-201ENST00000372447 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.45□□□□□ -0.26
C9orf78-201ENST00000372447 MLNRO43193 412 aa13.45□□□□□ -0.26
C9orf78-201ENST00000372447 DIRAS3O95661 229 aa13.45□□□□□ -0.26
C9orf78-201ENST00000372447 PHLDA2Q53GA4 152 aa13.45□□□□□ -0.26
C9orf78-201ENST00000372447 RNF126Q9BV68 326 aa13.45□□□□□ -0.26
C9orf78-201ENST00000372447 DYNLRB1Q9NP97 96 aa13.45□□□□□ -0.26
C9orf78-201ENST00000372447 RASL12Q9NYN1 266 aa13.45□□□□□ -0.26
C9orf78-201ENST00000372447 KANTRA0A1W2PQU2 76 aa13.44□□□□□ -0.26
C9orf78-201ENST00000372447 ZSCAN5BA6NJL1 495 aa13.44□□□□□ -0.26
C9orf78-201ENST00000372447 LEUTXA8MZ59 168 aa13.44□□□□□ -0.26
C9orf78-201ENST00000372447 BET1O15155 118 aa13.44□□□□□ -0.26
C9orf78-201ENST00000372447 NXPH2O95156 264 aa13.44□□□□□ -0.26
C9orf78-201ENST00000372447 ACAA1P09110 424 aaPredicted RBP13.44□□□□□ -0.26
C9orf78-201ENST00000372447 CTXN2P0C2S0 81 aa13.44□□□□□ -0.26
C9orf78-201ENST00000372447 ZNF880Q6PDB4 577 aa13.44□□□□□ -0.26
C9orf78-201ENST00000372447 C5orf24Q7Z6I8 188 aa13.44□□□□□ -0.26
C9orf78-201ENST00000372447 SCARB1Q8WTV0 552 aa13.44□□□□□ -0.26
C9orf78-201ENST00000372447 PCNPQ8WW12 178 aaKnown RBP13.44□□□□□ -0.26
C9orf78-201ENST00000372447 DCUN1D4Q92564 292 aa13.44□□□□□ -0.26
C9orf78-201ENST00000372447 CXXC4Q9H2H0 198 aa13.44□□□□□ -0.26
C9orf78-201ENST00000372447 MS4A5Q9H3V2 200 aa13.44□□□□□ -0.26
C9orf78-201ENST00000372447 AUP1Q9Y679 476 aa13.44□□□□□ -0.26
C9orf78-201ENST00000372447 IGHV3-64DA0A0J9YX35 117 aa13.43□□□□□ -0.26
C9orf78-201ENST00000372447 C17orf100A8MU93 164 aa13.43□□□□□ -0.26
C9orf78-201ENST00000372447 BCL2L11O43521 198 aa13.43□□□□□ -0.26
C9orf78-201ENST00000372447 OR2H2O95918 312 aa13.43□□□□□ -0.26
C9orf78-201ENST00000372447 OR5AC1P0C628 307 aa13.43□□□□□ -0.26
C9orf78-201ENST00000372447 MDH2P40926 338 aaKnown RBP13.43□□□□□ -0.26
C9orf78-201ENST00000372447 PPOXP50336 477 aa13.43□□□□□ -0.26
C9orf78-201ENST00000372447 UBA52P62987 128 aaKnown RBP13.43□□□□□ -0.26
C9orf78-201ENST00000372447 IL15RAQ13261 267 aa13.43□□□□□ -0.26
C9orf78-201ENST00000372447 TMEM187Q14656 261 aa13.43□□□□□ -0.26
C9orf78-201ENST00000372447 HERPUD1Q15011 391 aa13.43□□□□□ -0.26
C9orf78-201ENST00000372447 ZNF146Q15072 292 aa13.43□□□□□ -0.26
C9orf78-201ENST00000372447 ALKAL2Q6UX46 152 aa13.43□□□□□ -0.26
C9orf78-201ENST00000372447 CCDC71LQ8N9Z2 235 aa13.43□□□□□ -0.26
C9orf78-201ENST00000372447 SUCNR1Q9BXA5 334 aa13.43□□□□□ -0.26
C9orf78-201ENST00000372447 TREM2Q9NZC2 230 aa13.43□□□□□ -0.26
C9orf78-201ENST00000372447 KIF25Q9UIL4 384 aa13.43□□□□□ -0.26
C9orf78-201ENST00000372447 SETXQ7Z333 2677 aaKnown RBP13.43□□□□□ -0.26
C9orf78-201ENST00000372447 H0YIZ8 118 aa13.43□□□□□ -0.26
C9orf78-201ENST00000372447 SLC33A1O00400 549 aaPredicted RBP13.43□□□□□ -0.26
C9orf78-201ENST00000372447 SPRY3O43610 288 aa13.43□□□□□ -0.26
C9orf78-201ENST00000372447 SPDEFO95238 335 aa13.43□□□□□ -0.26
C9orf78-201ENST00000372447 IFNA21P01568 189 aa13.43□□□□□ -0.26
C9orf78-201ENST00000372447 LYL1P12980 280 aa13.43□□□□□ -0.26
C9orf78-201ENST00000372447 SP6Q3SY56 376 aa13.43□□□□□ -0.26
C9orf78-201ENST00000372447 PAN3Q58A45 887 aaKnown RBP13.43□□□□□ -0.26
C9orf78-201ENST00000372447 PRSS54Q6PEW0 395 aa13.43□□□□□ -0.26
C9orf78-201ENST00000372447 OR11L1Q8NGX0 322 aa13.43□□□□□ -0.26
C9orf78-201ENST00000372447 GSKIPQ9P0R6 139 aa13.43□□□□□ -0.26
C9orf78-201ENST00000372447 FBXO9Q9UK97 447 aaPredicted RBP13.43□□□□□ -0.26
C9orf78-201ENST00000372447 PDZD2O15018 2839 aa13.42□□□□□ -0.26
C9orf78-201ENST00000372447 IGKV1-6A0A0C4DH72 117 aa13.42□□□□□ -0.26
C9orf78-201ENST00000372447 POM121CA8CG34 1229 aa13.42□□□□□ -0.26
C9orf78-201ENST00000372447 SIRPB1O00241 398 aa13.42□□□□□ -0.26
C9orf78-201ENST00000372447 NDUFS7O75251 213 aa13.42□□□□□ -0.26
C9orf78-201ENST00000372447 TUSC2O75896 110 aa13.42□□□□□ -0.26
C9orf78-201ENST00000372447 IGHV1-46P01743 117 aa13.42□□□□□ -0.26
C9orf78-201ENST00000372447 PET100P0DJ07 73 aa13.42□□□□□ -0.26
C9orf78-201ENST00000372447 GNRHRP30968 328 aa13.42□□□□□ -0.26
C9orf78-201ENST00000372447 RAB32Q13637 225 aa13.42□□□□□ -0.26
C9orf78-201ENST00000372447 IAH1Q2TAA2 248 aaPredicted RBP13.42□□□□□ -0.26
C9orf78-201ENST00000372447 ESCO2Q56NI9 601 aa13.42□□□□□ -0.26
C9orf78-201ENST00000372447 SPIN3Q5JUX0 258 aa13.42□□□□□ -0.26
C9orf78-201ENST00000372447 GGNBP1Q5YKI7 109 aa13.42□□□□□ -0.26
C9orf78-201ENST00000372447 FAM185AQ8N0U4 392 aa13.42□□□□□ -0.26
C9orf78-201ENST00000372447 LRTM2Q8N967 370 aa13.42□□□□□ -0.26
C9orf78-201ENST00000372447 SPERTQ8NA61 448 aa13.42□□□□□ -0.26
C9orf78-201ENST00000372447 OR4A4PQ8NGN8 299 aa13.42□□□□□ -0.26
C9orf78-201ENST00000372447 ST8SIA2Q92186 375 aa13.42□□□□□ -0.26
C9orf78-201ENST00000372447 HES4Q9HCC6 221 aa13.42□□□□□ -0.26
C9orf78-201ENST00000372447 A0A1B0GWJ7 208 aa13.41□□□□□ -0.26
C9orf78-201ENST00000372447 SH2D1BO14796 132 aa13.41□□□□□ -0.26
C9orf78-201ENST00000372447 KCNAB3O43448 404 aa13.41□□□□□ -0.26
C9orf78-201ENST00000372447 KCNJ3P48549 501 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 179.7 ms