RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 SIGLEC7Q9Y286 467 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 TPRKBQ9Y3C4 175 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 POMT1Q9Y6A1 747 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 HSPE1-MOB4S4R3N1 261 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 HUWE1Q7Z6Z7 4374 aaKnown RBP3.13□□□□□ -1.91
SMC1B-201ENST00000357450 TRAV14DV4A0A0A6YYC5 116 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 M0R1X1 148 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 DHFRP00374 187 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 IGKV1D-33P01593 117 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 IGKV1-33P01594 117 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 GAPDHP04406 335 aaKnown RBP3.13□□□□□ -1.91
SMC1B-201ENST00000357450 CLEC2LP0C7M8 214 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 TUBG1P23258 451 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 WNT5AP41221 380 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 COMPP49747 757 aaPredicted RBP3.13□□□□□ -1.91
SMC1B-201ENST00000357450 P2RY4P51582 365 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 NKX2-5P52952 324 aaPredicted RBP3.13□□□□□ -1.91
SMC1B-201ENST00000357450 HILS1P60008 231 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 TNXAQ16473 311 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 SNAI3Q3KNW1 292 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 LCE5AQ5TCM9 118 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 OVCH2Q7RTZ1 564 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 Q8IYB0 196 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 ARMC10Q8N2F6 343 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 OR5M8Q8NGP6 311 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 DYRK2Q92630 601 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 P2RX4Q99571 388 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 MMP27Q9H306 513 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 FGF20Q9NP95 211 aaPredicted RBP3.13□□□□□ -1.91
SMC1B-201ENST00000357450 TUBG2Q9NRH3 451 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 EXOSC1Q9Y3B2 195 aaKnown RBP3.13□□□□□ -1.91
SMC1B-201ENST00000357450 LRP12Q9Y561 859 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 IGKV1D-42A0A075B6H8 117 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 IGKV1D-43A0A0B4J1Z2 117 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 TMEM30CPA0ZSE6 113 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 IRGMA1A4Y4 181 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 DBX1A6NMT0 343 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 AP4M1O00189 453 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 SYNGR1O43759 233 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 PRKYO43930 277 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 SCG5P05408 212 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 AZGP1P25311 298 aaKnown RBP3.13□□□□□ -1.91
SMC1B-201ENST00000357450 EMP1P54849 157 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 ZNF85Q03923 595 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 TRIM16LQ309B1 348 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 SLC25A53Q5H9E4 307 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 TOR2AQ5JU69 321 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 LRRC28Q86X40 367 aaPredicted RBP3.13□□□□□ -1.91
SMC1B-201ENST00000357450 LAX1Q8IWV1 398 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 ZNF679Q8IYX0 411 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 TMEM123Q8N131 208 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 ZNF414Q96IQ9 312 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 TEAD3Q99594 435 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 DAPK2Q9UIK4 370 aa3.13□□□□□ -1.91
SMC1B-201ENST00000357450 MRPS28Q9Y2Q9 187 aaKnown RBP3.13□□□□□ -1.91
SMC1B-201ENST00000357450 LINC00862A6NCI5 91 aa3.12□□□□□ -1.91
SMC1B-201ENST00000357450 A8MXK9 166 aa3.12□□□□□ -1.91
SMC1B-201ENST00000357450 XRCC3O43542 346 aa3.12□□□□□ -1.91
SMC1B-201ENST00000357450 TRGV3P03979 118 aa3.12□□□□□ -1.91
SMC1B-201ENST00000357450 UBCP0CG48 685 aaKnown RBP3.12□□□□□ -1.91
SMC1B-201ENST00000357450 IGLL1P15814 213 aa3.12□□□□□ -1.91
SMC1B-201ENST00000357450 IGFBP2P18065 325 aa3.12□□□□□ -1.91
SMC1B-201ENST00000357450 MAPK3P27361 379 aaPredicted RBP3.12□□□□□ -1.91
SMC1B-201ENST00000357450 CFHR2P36980 270 aa3.12□□□□□ -1.91
SMC1B-201ENST00000357450 EVX1P49640 407 aa3.12□□□□□ -1.91
SMC1B-201ENST00000357450 PSMA6P60900 246 aaKnown RBP3.12□□□□□ -1.91
SMC1B-201ENST00000357450 LSM3P62310 102 aaKnown RBP3.12□□□□□ -1.91
SMC1B-201ENST00000357450 HOXA4Q00056 320 aaPredicted RBP3.12□□□□□ -1.91
SMC1B-201ENST00000357450 ASAH1Q13510 395 aa3.12□□□□□ -1.91
SMC1B-201ENST00000357450 ODF1Q14990 250 aa3.12□□□□□ -1.91
SMC1B-201ENST00000357450 SLC9A3R2Q15599 337 aa3.12□□□□□ -1.91
SMC1B-201ENST00000357450 RAB11BQ15907 218 aa3.12□□□□□ -1.91
SMC1B-201ENST00000357450 TMEM155Q4W5P6 130 aa3.12□□□□□ -1.91
SMC1B-201ENST00000357450 SLC25A47Q6Q0C1 308 aa3.12□□□□□ -1.91
SMC1B-201ENST00000357450 STPG2Q8N412 459 aa3.12□□□□□ -1.91
SMC1B-201ENST00000357450 OR8B12Q8NGG6 310 aa3.12□□□□□ -1.91
SMC1B-201ENST00000357450 ATG5Q9H1Y0 275 aa3.12□□□□□ -1.91
SMC1B-201ENST00000357450 MCUBQ9NWR8 336 aa3.12□□□□□ -1.91
SMC1B-201ENST00000357450 SLC2A8Q9NY64 477 aa3.12□□□□□ -1.91
SMC1B-201ENST00000357450 VPREB3Q9UKI3 123 aa3.12□□□□□ -1.91
SMC1B-201ENST00000357450 SOX21Q9Y651 276 aaPredicted RBP3.12□□□□□ -1.91
SMC1B-201ENST00000357450 ARPC4-TTLL3A0A0A6YYG9 625 aa3.12□□□□□ -1.91
SMC1B-201ENST00000357450 DHRS3O75911 302 aa3.12□□□□□ -1.91
SMC1B-201ENST00000357450 NTF4P34130 210 aa3.12□□□□□ -1.91
SMC1B-201ENST00000357450 PPP5CP53041 499 aa3.12□□□□□ -1.91
SMC1B-201ENST00000357450 MRPS11P82912 194 aaKnown RBP3.12□□□□□ -1.91
SMC1B-201ENST00000357450 RTL8BQ17RB0 113 aa3.12□□□□□ -1.91
SMC1B-201ENST00000357450 KRTAP27-1Q3LI81 207 aa3.12□□□□□ -1.91
SMC1B-201ENST00000357450 LGALSLQ3ZCW2 172 aaPredicted RBP3.12□□□□□ -1.91
SMC1B-201ENST00000357450 C6orf183Q5T699 404 aa3.12□□□□□ -1.91
SMC1B-201ENST00000357450 ZNF575Q86XF7 245 aa3.12□□□□□ -1.91
SMC1B-201ENST00000357450 ELMOD2Q8IZ81 293 aa3.12□□□□□ -1.91
SMC1B-201ENST00000357450 ADPRHL1Q8NDY3 354 aa3.12□□□□□ -1.91
SMC1B-201ENST00000357450 OR6M1Q8NGM8 313 aa3.12□□□□□ -1.91
SMC1B-201ENST00000357450 TCTEX1D2Q8WW35 142 aa3.12□□□□□ -1.91
SMC1B-201ENST00000357450 MYDGFQ969H8 173 aa3.12□□□□□ -1.91
SMC1B-201ENST00000357450 MOB3AQ96BX8 217 aa3.12□□□□□ -1.91
SMC1B-201ENST00000357450 GALMQ96C23 342 aa3.12□□□□□ -1.91
SMC1B-201ENST00000357450 PDCD1LG2Q9BQ51 273 aa3.12□□□□□ -1.91
SMC1B-201ENST00000357450 SPACA1Q9HBV2 294 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms