RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 C20orf204Q6ZNR8 217 aa18.67■□□□□ 0.58
TPM4-201ENST00000300933 WFDC1Q9HC57 220 aa18.67■□□□□ 0.58
TPM4-201ENST00000300933 C19orf12Q9NSK7 152 aa18.67■□□□□ 0.58
TPM4-201ENST00000300933 FZR1Q9UM11 496 aa18.67■□□□□ 0.58
TPM4-201ENST00000300933 CUL9Q8IWT3 2517 aa18.67■□□□□ 0.58
TPM4-201ENST00000300933 ZNF727A8MUV8 499 aa18.67■□□□□ 0.58
TPM4-201ENST00000300933 H7C1Q1 480 aa18.67■□□□□ 0.58
TPM4-201ENST00000300933 DANCRP0C864 163 aa18.67■□□□□ 0.58
TPM4-201ENST00000300933 SURF2Q15527 256 aaPredicted RBP18.67■□□□□ 0.58
TPM4-201ENST00000300933 FAM214BQ7L5A3 538 aa18.67■□□□□ 0.58
TPM4-201ENST00000300933 LYZL2Q7Z4W2 148 aa18.67■□□□□ 0.58
TPM4-201ENST00000300933 UBAC2Q8NBM4 344 aa18.67■□□□□ 0.58
TPM4-201ENST00000300933 OR5A2Q8NGI9 324 aa18.67■□□□□ 0.58
TPM4-201ENST00000300933 UBALD1Q8TB05 177 aa18.67■□□□□ 0.58
TPM4-201ENST00000300933 RARRES2Q99969 163 aa18.67■□□□□ 0.58
TPM4-201ENST00000300933 SLC2A9Q9NRM0 540 aa18.67■□□□□ 0.58
TPM4-201ENST00000300933 ASCL1P50553 236 aa18.67■□□□□ 0.58
TPM4-201ENST00000300933 RHEBQ15382 184 aa18.67■□□□□ 0.58
TPM4-201ENST00000300933 PRSS33Q8NF86 280 aa18.67■□□□□ 0.58
TPM4-201ENST00000300933 SLC35B3Q9H1N7 401 aa18.67■□□□□ 0.58
TPM4-201ENST00000300933 PPP1CCP36873 323 aaKnown RBP18.66■□□□□ 0.58
TPM4-201ENST00000300933 TBC1D28Q2M2D7 210 aa18.66■□□□□ 0.58
TPM4-201ENST00000300933 PDZD11Q5EBL8 140 aa18.66■□□□□ 0.58
TPM4-201ENST00000300933 RCL1Q9Y2P8 373 aaKnown RBP18.66■□□□□ 0.58
TPM4-201ENST00000300933 SLC34A2O95436 690 aa18.66■□□□□ 0.58
TPM4-201ENST00000300933 NANOS1Q8WY41 292 aaKnown RBP18.66■□□□□ 0.58
TPM4-201ENST00000300933 MALSU1Q96EH3 234 aa18.66■□□□□ 0.58
TPM4-201ENST00000300933 URGCP-MRPS24S4R325 110 aa18.66■□□□□ 0.58
TPM4-201ENST00000300933 TRAV17A0A0B4J275 112 aa18.65■□□□□ 0.58
TPM4-201ENST00000300933 H0YL77 283 aa18.65■□□□□ 0.58
TPM4-201ENST00000300933 IFNA21P01568 189 aa18.65■□□□□ 0.58
TPM4-201ENST00000300933 IGHG3P01860 377 aa18.65■□□□□ 0.58
TPM4-201ENST00000300933 RNF224P0DH78 156 aa18.65■□□□□ 0.58
TPM4-201ENST00000300933 S100A2P29034 98 aa18.65■□□□□ 0.58
TPM4-201ENST00000300933 KIR2DL2P43627 348 aaPredicted RBP18.65■□□□□ 0.58
TPM4-201ENST00000300933 TMEM211Q6ICI0 200 aa18.65■□□□□ 0.58
TPM4-201ENST00000300933 WDR86Q86TI4 376 aa18.65■□□□□ 0.58
TPM4-201ENST00000300933 GP6Q9HCN6 339 aa18.65■□□□□ 0.58
TPM4-201ENST00000300933 TREM2Q9NZC2 230 aa18.65■□□□□ 0.58
TPM4-201ENST00000300933 HOXA5P20719 270 aa18.65■□□□□ 0.58
TPM4-201ENST00000300933 HEPN1Q6WQI6 88 aa18.65■□□□□ 0.58
TPM4-201ENST00000300933 MEX3BQ6ZN04 569 aaKnown RBP18.65■□□□□ 0.58
TPM4-201ENST00000300933 CXorf67Q86X51 503 aaPredicted RBP18.65■□□□□ 0.58
TPM4-201ENST00000300933 DECR2Q9NUI1 292 aa18.65■□□□□ 0.58
TPM4-201ENST00000300933 RFNGQ9Y644 331 aa18.65■□□□□ 0.58
TPM4-201ENST00000300933 ADGRG4Q8IZF6 3080 aa18.64■□□□□ 0.57
TPM4-201ENST00000300933 GPR37O15354 613 aa18.64■□□□□ 0.57
TPM4-201ENST00000300933 PPP1CBP62140 327 aa18.64■□□□□ 0.57
TPM4-201ENST00000300933 ZNF343Q6P1L6 599 aa18.64■□□□□ 0.57
TPM4-201ENST00000300933 SUMF2Q8NBJ7 301 aa18.64■□□□□ 0.57
TPM4-201ENST00000300933 FAM213BQ8TBF2 198 aa18.64■□□□□ 0.57
TPM4-201ENST00000300933 SLC25A40Q8TBP6 338 aa18.64■□□□□ 0.57
TPM4-201ENST00000300933 CDH20Q9HBT6 801 aa18.64■□□□□ 0.57
TPM4-201ENST00000300933 DIDO1Q9BTC0 2240 aaKnown RBP18.64■□□□□ 0.57
TPM4-201ENST00000300933 SMPD2O60906 423 aa18.64■□□□□ 0.57
TPM4-201ENST00000300933 PPYP01298 95 aa18.64■□□□□ 0.57
TPM4-201ENST00000300933 MBPP02686 304 aaPredicted RBP18.64■□□□□ 0.57
TPM4-201ENST00000300933 GNG3P63215 75 aa18.64■□□□□ 0.57
TPM4-201ENST00000300933 HERPUD1Q15011 391 aa18.64■□□□□ 0.57
TPM4-201ENST00000300933 SPIN3Q5JUX0 258 aa18.64■□□□□ 0.57
TPM4-201ENST00000300933 TMEM182Q6ZP80 229 aaPredicted RBP18.64■□□□□ 0.57
TPM4-201ENST00000300933 DOK5Q9P104 306 aa18.64■□□□□ 0.57
TPM4-201ENST00000300933 PCNX1Q96RV3 2341 aa18.63■□□□□ 0.57
TPM4-201ENST00000300933 K7EM74 188 aa18.63■□□□□ 0.57
TPM4-201ENST00000300933 HERV-K104P61576 105 aa18.63■□□□□ 0.57
TPM4-201ENST00000300933 TGFBR3Q03167 851 aa18.63■□□□□ 0.57
TPM4-201ENST00000300933 GABRA6Q16445 453 aa18.63■□□□□ 0.57
TPM4-201ENST00000300933 SOHLH1Q5JUK2 328 aa18.63■□□□□ 0.57
TPM4-201ENST00000300933 PRR18Q8N4B5 295 aa18.63■□□□□ 0.57
TPM4-201ENST00000300933 Q8NFD4 153 aa18.63■□□□□ 0.57
TPM4-201ENST00000300933 NAA60Q9H7X0 242 aa18.63■□□□□ 0.57
TPM4-201ENST00000300933 PHF1O43189 567 aaPredicted RBP18.63■□□□□ 0.57
TPM4-201ENST00000300933 GRPP07492 148 aa18.63■□□□□ 0.57
TPM4-201ENST00000300933 MPV17P39210 176 aa18.63■□□□□ 0.57
TPM4-201ENST00000300933 NHLH2Q02577 135 aa18.63■□□□□ 0.57
TPM4-201ENST00000300933 ZNF674Q2M3X9 581 aa18.63■□□□□ 0.57
TPM4-201ENST00000300933 TP53RKQ96S44 253 aa18.63■□□□□ 0.57
TPM4-201ENST00000300933 GAR1Q9NY12 217 aaKnown RBP18.63■□□□□ 0.57
TPM4-201ENST00000300933 DLL3Q9NYJ7 618 aa18.63■□□□□ 0.57
TPM4-201ENST00000300933 BORCS7-ASMTA0A0B4J1R7 106 aa18.62■□□□□ 0.57
TPM4-201ENST00000300933 CDIPTO14735 213 aa18.62■□□□□ 0.57
TPM4-201ENST00000300933 SEC11BP0C7V7 166 aa18.62■□□□□ 0.57
TPM4-201ENST00000300933 CDX1P47902 265 aaPredicted RBP18.62■□□□□ 0.57
TPM4-201ENST00000300933 IGFL2Q6UWQ7 119 aa18.62■□□□□ 0.57
TPM4-201ENST00000300933 COMMD1Q8N668 190 aa18.62■□□□□ 0.57
TPM4-201ENST00000300933 KDF1Q8NAX2 398 aaPredicted RBP18.62■□□□□ 0.57
TPM4-201ENST00000300933 OR10D4PQ8NGN7 298 aa18.62■□□□□ 0.57
TPM4-201ENST00000300933 Q9N2K0 584 aa18.62■□□□□ 0.57
TPM4-201ENST00000300933 TUBD1Q9UJT1 453 aa18.62■□□□□ 0.57
TPM4-201ENST00000300933 KCNIP3Q9Y2W7 256 aa18.62■□□□□ 0.57
TPM4-201ENST00000300933 TRAV24A0A0B4J272 114 aa18.62■□□□□ 0.57
TPM4-201ENST00000300933 IGKV1D-13A0A0B4J2D9 117 aa18.62■□□□□ 0.57
TPM4-201ENST00000300933 IGKV1-6A0A0C4DH72 117 aa18.62■□□□□ 0.57
TPM4-201ENST00000300933 A0A1B0GV90 55 aa18.62■□□□□ 0.57
TPM4-201ENST00000300933 IGKV1-13P0DP09 117 aa18.62■□□□□ 0.57
TPM4-201ENST00000300933 FOSL1P15407 271 aa18.62■□□□□ 0.57
TPM4-201ENST00000300933 TMEM187Q14656 261 aa18.62■□□□□ 0.57
TPM4-201ENST00000300933 FAM58AQ8N1B3 248 aa18.62■□□□□ 0.57
TPM4-201ENST00000300933 MOB3AQ96BX8 217 aa18.62■□□□□ 0.57
TPM4-201ENST00000300933 PBDC1Q9BVG4 233 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms