RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 HERPUD1Q15011 391 aa11.52□□□□□ -0.56
TTC39B-201ENST00000297615 OR2C3Q8N628 320 aa11.52□□□□□ -0.56
TTC39B-201ENST00000297615 OR10V1Q8NGI7 309 aa11.52□□□□□ -0.56
TTC39B-201ENST00000297615 MOB3AQ96BX8 217 aa11.52□□□□□ -0.56
TTC39B-201ENST00000297615 SAT2Q96F10 170 aaPredicted RBP11.52□□□□□ -0.56
TTC39B-201ENST00000297615 ZPBPQ9BS86 351 aa11.52□□□□□ -0.56
TTC39B-201ENST00000297615 TUBD1Q9UJT1 453 aa11.52□□□□□ -0.56
TTC39B-201ENST00000297615 HSF4Q9ULV5 492 aa11.52□□□□□ -0.56
TTC39B-201ENST00000297615 DEGS1O15121 323 aa11.52□□□□□ -0.57
TTC39B-201ENST00000297615 ZNF806P0C7X5 589 aa11.52□□□□□ -0.57
TTC39B-201ENST00000297615 IGHV1-2P23083 117 aa11.52□□□□□ -0.57
TTC39B-201ENST00000297615 DVL1P1P54792 670 aaPredicted RBP11.52□□□□□ -0.57
TTC39B-201ENST00000297615 BTNL3Q6UXE8 466 aa11.52□□□□□ -0.57
TTC39B-201ENST00000297615 SFT2D1Q8WV19 159 aa11.52□□□□□ -0.57
TTC39B-201ENST00000297615 APOBEC3DQ96AK3 386 aaPredicted RBP11.52□□□□□ -0.57
TTC39B-201ENST00000297615 USB1Q9BQ65 265 aaKnown RBP11.52□□□□□ -0.57
TTC39B-201ENST00000297615 C1QTNF5Q9BXJ0 243 aa11.52□□□□□ -0.57
TTC39B-201ENST00000297615 PLEKHA2Q9HB19 425 aa11.52□□□□□ -0.57
TTC39B-201ENST00000297615 KCNJ16Q9NPI9 418 aa11.52□□□□□ -0.57
TTC39B-201ENST00000297615 IGKV1-6A0A0C4DH72 117 aa11.51□□□□□ -0.57
TTC39B-201ENST00000297615 HMGB3O15347 200 aaKnown RBP11.51□□□□□ -0.57
TTC39B-201ENST00000297615 CHST1O43916 411 aa11.51□□□□□ -0.57
TTC39B-201ENST00000297615 SOX15O60248 233 aa11.51□□□□□ -0.57
TTC39B-201ENST00000297615 GPR137BO60478 399 aa11.51□□□□□ -0.57
TTC39B-201ENST00000297615 LYL1P12980 280 aa11.51□□□□□ -0.57
TTC39B-201ENST00000297615 FBXW9Q5XUX1 488 aa11.51□□□□□ -0.57
TTC39B-201ENST00000297615 LINC00518Q8N0U6 118 aa11.51□□□□□ -0.57
TTC39B-201ENST00000297615 C9orf106Q8NAJ2 232 aa11.51□□□□□ -0.57
TTC39B-201ENST00000297615 DMBX1Q8NFW5 382 aa11.51□□□□□ -0.57
TTC39B-201ENST00000297615 IGHV3OR15-7A0A075B7D8 119 aa11.51□□□□□ -0.57
TTC39B-201ENST00000297615 C7orf77A4D0Y5 90 aa11.51□□□□□ -0.57
TTC39B-201ENST00000297615 ZNF727A8MUV8 499 aa11.51□□□□□ -0.57
TTC39B-201ENST00000297615 C21orf140B9A014 251 aa11.51□□□□□ -0.57
TTC39B-201ENST00000297615 RRP8O43159 456 aaKnown RBP11.51□□□□□ -0.57
TTC39B-201ENST00000297615 ZNF83P51522 516 aa11.51□□□□□ -0.57
TTC39B-201ENST00000297615 DYNLT3P51808 116 aa11.51□□□□□ -0.57
TTC39B-201ENST00000297615 AESQ08117 197 aa11.51□□□□□ -0.57
TTC39B-201ENST00000297615 CARHSP1Q9Y2V2 147 aaKnown RBP11.51□□□□□ -0.57
TTC39B-201ENST00000297615 MMP24Q9Y5R2 645 aa11.51□□□□□ -0.57
TTC39B-201ENST00000297615 KIAA1324LA8MWY0 1029 aaPredicted RBP11.51□□□□□ -0.57
TTC39B-201ENST00000297615 PLXNB1O43157 2135 aa11.51□□□□□ -0.57
TTC39B-201ENST00000297615 RBMXL2O75526 392 aaKnown RBP11.51□□□□□ -0.57
TTC39B-201ENST00000297615 SLC34A2O95436 690 aa11.51□□□□□ -0.57
TTC39B-201ENST00000297615 ZNF14P17017 642 aaPredicted RBP11.51□□□□□ -0.57
TTC39B-201ENST00000297615 ATP6V0CP27449 155 aa11.51□□□□□ -0.57
TTC39B-201ENST00000297615 TNFSF10P50591 281 aa11.51□□□□□ -0.57
TTC39B-201ENST00000297615 OR8B8Q15620 311 aa11.51□□□□□ -0.57
TTC39B-201ENST00000297615 RIPPLY2Q5TAB7 128 aa11.51□□□□□ -0.57
TTC39B-201ENST00000297615 SLC16A13Q7RTY0 426 aa11.51□□□□□ -0.57
TTC39B-201ENST00000297615 ZNF610Q8N9Z0 462 aa11.51□□□□□ -0.57
TTC39B-201ENST00000297615 C10orf35Q96D05 121 aa11.51□□□□□ -0.57
TTC39B-201ENST00000297615 TNCP24821 2201 aa11.5□□□□□ -0.57
TTC39B-201ENST00000297615 ZNF724A8MTY0 619 aa11.5□□□□□ -0.57
TTC39B-201ENST00000297615 KLK10O43240 276 aa11.5□□□□□ -0.57
TTC39B-201ENST00000297615 ECI1P42126 302 aa11.5□□□□□ -0.57
TTC39B-201ENST00000297615 DHRS7BQ6IAN0 325 aaPredicted RBP11.5□□□□□ -0.57
TTC39B-201ENST00000297615 RBMS3Q6XE24 437 aaKnown RBP11.5□□□□□ -0.57
TTC39B-201ENST00000297615 WDR86Q86TI4 376 aa11.5□□□□□ -0.57
TTC39B-201ENST00000297615 TMEM171Q8WVE6 324 aa11.5□□□□□ -0.57
TTC39B-201ENST00000297615 C18orf12Q96KH6 178 aa11.5□□□□□ -0.57
TTC39B-201ENST00000297615 IER2Q9BTL4 223 aa11.5□□□□□ -0.57
TTC39B-201ENST00000297615 PARP11Q9NR21 331 aa11.5□□□□□ -0.57
TTC39B-201ENST00000297615 METRNQ9UJH8 293 aa11.5□□□□□ -0.57
TTC39B-201ENST00000297615 A0A1W2PPE3 182 aa11.5□□□□□ -0.57
TTC39B-201ENST00000297615 TXNL1O43396 289 aa11.5□□□□□ -0.57
TTC39B-201ENST00000297615 TMEM50AO95807 157 aa11.5□□□□□ -0.57
TTC39B-201ENST00000297615 SERPINE2P07093 398 aa11.5□□□□□ -0.57
TTC39B-201ENST00000297615 RD3LP0DJH9 198 aa11.5□□□□□ -0.57
TTC39B-201ENST00000297615 TMEM42Q69YG0 159 aa11.5□□□□□ -0.57
TTC39B-201ENST00000297615 LRP11Q86VZ4 500 aa11.5□□□□□ -0.57
TTC39B-201ENST00000297615 FAM58AQ8N1B3 248 aa11.5□□□□□ -0.57
TTC39B-201ENST00000297615 UBAC2Q8NBM4 344 aa11.5□□□□□ -0.57
TTC39B-201ENST00000297615 LEAP2Q969E1 77 aa11.5□□□□□ -0.57
TTC39B-201ENST00000297615 CACFD1Q9UGQ2 172 aa11.5□□□□□ -0.57
TTC39B-201ENST00000297615 TNRC6BQ9UPQ9 1833 aaKnown RBP11.5□□□□□ -0.57
TTC39B-201ENST00000297615 RPL36A-HNRNPH2H7BZ11 118 aa11.49□□□□□ -0.57
TTC39B-201ENST00000297615 H7C1Q1 480 aa11.49□□□□□ -0.57
TTC39B-201ENST00000297615 PSG2P11465 335 aa11.49□□□□□ -0.57
TTC39B-201ENST00000297615 SNCAP37840 140 aa11.49□□□□□ -0.57
TTC39B-201ENST00000297615 P2RY1P47900 373 aa11.49□□□□□ -0.57
TTC39B-201ENST00000297615 PPP1CBP62140 327 aa11.49□□□□□ -0.57
TTC39B-201ENST00000297615 CEACAM21Q3KPI0 293 aa11.49□□□□□ -0.57
TTC39B-201ENST00000297615 BEND4Q6ZU67 534 aa11.49□□□□□ -0.57
TTC39B-201ENST00000297615 MDS2Q8NDY4 140 aa11.49□□□□□ -0.57
TTC39B-201ENST00000297615 TMEM222Q9H0R3 208 aa11.49□□□□□ -0.57
TTC39B-201ENST00000297615 GLRX2Q9NS18 164 aa11.49□□□□□ -0.57
TTC39B-201ENST00000297615 DCHS2Q6V1P9 2916 aa11.49□□□□□ -0.57
TTC39B-201ENST00000297615 TRAV24A0A0B4J272 114 aa11.49□□□□□ -0.57
TTC39B-201ENST00000297615 A0A0G2JRQ6 117 aa11.49□□□□□ -0.57
TTC39B-201ENST00000297615 ERVFRD-1P60508 538 aa11.49□□□□□ -0.57
TTC39B-201ENST00000297615 PSG7Q13046 419 aa11.49□□□□□ -0.57
TTC39B-201ENST00000297615 IQCF2Q8IXL9 164 aa11.49□□□□□ -0.57
TTC39B-201ENST00000297615 CMTM1Q8IZ96 169 aa11.49□□□□□ -0.57
TTC39B-201ENST00000297615 PLPPR1Q8TBJ4 325 aa11.49□□□□□ -0.57
TTC39B-201ENST00000297615 TAAR6Q96RI8 345 aa11.49□□□□□ -0.57
TTC39B-201ENST00000297615 ZNF98A6NK75 572 aa11.49□□□□□ -0.57
TTC39B-201ENST00000297615 BMP5P22003 454 aa11.49□□□□□ -0.57
TTC39B-201ENST00000297615 COL8A2P25067 703 aa11.49□□□□□ -0.57
TTC39B-201ENST00000297615 GABRA2P47869 451 aa11.49□□□□□ -0.57
TTC39B-201ENST00000297615 FGF8P55075 233 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms