RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Tssk5Q8C1R0 372 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Vash1Q8C1W1 375 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Fbxw17Q8CFE8 466 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Tmem144Q8VEH0 348 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Olfr870Q8VGG4 311 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Olfr638Q8VH20 321 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Tmem123Q91Z22 195 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Znhit3Q9CQK1 151 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 FibinQ9CQS3 217 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Gm10762Q9CZN6 115 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 4933402D24RikQ9D4D3 167 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Efcab10Q9D581 132 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Slc25a27Q9D6D0 322 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Necab3Q9D6J4 353 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Znf593Q9DB42 134 aaKnown RBP6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Bbs10Q9DBI2 713 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Jag2Q9QYE5 1247 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 SptbP15508 2128 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Dock7Q8R1A4 2130 aaKnown RBP6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Gm3952A0A0A6YXJ1 191 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Olfr709-ps1A0A140T8J9 307 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Gm3045A0A1D5RMA1 209 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 MsmpB1AWI6 139 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Olfr750E9Q0Z1 331 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Olfr62L7MU75 315 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Wfdc9Q3UW41 83 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Trp53i11Q4QQM4 189 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Slc5a6Q5U4D8 634 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Olfr12Q60894 333 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Sox19Q62249 55 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Tle1Q62440 770 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 AstlQ6HA09 435 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Olfr859Q7TRF5 309 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 NelfaQ8BG30 530 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 4930474N05RikQ8BVR5 218 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Entpd8Q8K0L2 497 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Tmem267Q8VDR5 215 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Olfr522Q8VGL1 312 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Olfr101Q920Z0 308 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Lgals2Q9CQW5 130 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Prss30Q9QYZ9 310 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Fbxl17Q9QZN1 701 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 DptQ9QZZ6 201 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Kcne3Q9WTW2 103 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Suclg1Q9WUM5 346 aaKnown RBP6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 NgfrQ9Z0W1 417 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Gm3550W4VSN7 160 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Igkv9-124A0A0G2JDR3 117 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 9130204L05RikG3UWB8 92 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Vmn1r128L7N2B4 307 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 ComtO88587 265 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Rbx1P62878 108 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 F7P70375 446 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Idh3gP70404 393 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Htr2bQ02152 479 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Riiad1Q3KNY5 119 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Fbxo7Q3U7U3 523 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 McidasQ3UZ45 379 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Hes3Q61657 175 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Slc22a27Q76M72 551 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Olfr1166Q7TR27 316 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Zfp819Q80V81 607 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Megf9Q8BH27 600 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Mblac2Q8BL86 279 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Gm26558Q8BLW8 286 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Gm16503Q8C6M9 103 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Zc3h8Q9JJ48 305 aaKnown RBP6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Lbx2Q9WUN8 195 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Sema4fQ9Z123 777 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 2410004P03RikA0A087WQY2 205 aa6.71□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Ighv5-15A0A0A6YWC7 117 aa6.71□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Olfr1118A0A0J9YUE7 307 aa6.71□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Gm13271B1AYH9 182 aa6.71□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Vmn1r180B9EK86 305 aa6.71□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Vmn1r80L7N1Z3 308 aa6.71□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Klk1b3P00756 261 aa6.71□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Dusp1P28563 367 aa6.71□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Plpp1Q61469 283 aa6.71□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Nol4lQ6DIB4 494 aa6.71□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Prss33Q80WM7 277 aa6.71□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Lgi3Q8K406 548 aa6.71□□□□□ -1.33
Bdnf-209ENSMUST00000111050 MallQ91X49 154 aa6.71□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Mrpl27Q99N92 148 aa6.71□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Snu13Q9D0T1 128 aaKnown RBP6.71□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Elovl7Q9D2Y9 281 aa6.71□□□□□ -1.33
Bdnf-209ENSMUST00000111050 P2ry4Q9JJS7 361 aa6.71□□□□□ -1.33
Bdnf-209ENSMUST00000111050 AplnrQ9WV08 377 aa6.71□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Rhox7bA6PW38 321 aa6.71□□□□□ -1.34
Bdnf-209ENSMUST00000111050 Gm21834J3QN05 151 aa6.71□□□□□ -1.34
Bdnf-209ENSMUST00000111050 2410141K09RikK7N769 464 aa6.71□□□□□ -1.34
Bdnf-209ENSMUST00000111050 Csn1s2bP02664 143 aa6.71□□□□□ -1.34
Bdnf-209ENSMUST00000111050 Pax4P32115 349 aa6.71□□□□□ -1.34
Bdnf-209ENSMUST00000111050 Tcl1aP56280 116 aa6.71□□□□□ -1.34
Bdnf-209ENSMUST00000111050 Vax1Q2NKI2 338 aa6.71□□□□□ -1.34
Bdnf-209ENSMUST00000111050 Olfr988Q7TRA1 309 aa6.71□□□□□ -1.34
Bdnf-209ENSMUST00000111050 Olfr987Q7TRA2 309 aa6.71□□□□□ -1.34
Bdnf-209ENSMUST00000111050 Sh2d7Q8BI17 458 aa6.71□□□□□ -1.34
Bdnf-209ENSMUST00000111050 Ahsa1Q8BK64 338 aa6.71□□□□□ -1.34
Bdnf-209ENSMUST00000111050 Lhfpl6Q8BM86 200 aa6.71□□□□□ -1.34
Bdnf-209ENSMUST00000111050 Cd207Q8VBX4 331 aa6.71□□□□□ -1.34
Retrieved 100 of 22,080 RNA–protein pairs in 48.4 ms