Protein–RNA interactions for Protein: Q8BG30

Nelfa, Negative elongation factor A, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NelfaQ8BG30 Gm25239-201ENSMUST00000174915 86 ntBASIC33.31■■■□□ 2.92
NelfaQ8BG30 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
NelfaQ8BG30 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
NelfaQ8BG30 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
NelfaQ8BG30 Gm15042-201ENSMUST00000120212 883 ntBASIC29.21■■■□□ 2.27
NelfaQ8BG30 Gm24109-201ENSMUST00000175489 103 ntBASIC28.85■■■□□ 2.21
NelfaQ8BG30 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
NelfaQ8BG30 Gm15045-201ENSMUST00000117359 883 ntBASIC28.62■■■□□ 2.17
NelfaQ8BG30 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
NelfaQ8BG30 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
NelfaQ8BG30 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
NelfaQ8BG30 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
NelfaQ8BG30 Gm23366-201ENSMUST00000175022 89 ntBASIC27.8■■■□□ 2.04
NelfaQ8BG30 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
NelfaQ8BG30 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
NelfaQ8BG30 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.3■■□□□ 1.96
NelfaQ8BG30 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
NelfaQ8BG30 Psd-208ENSMUST00000224556 2034 ntBASIC27.22■■□□□ 1.95
NelfaQ8BG30 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
NelfaQ8BG30 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
NelfaQ8BG30 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
NelfaQ8BG30 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
NelfaQ8BG30 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
NelfaQ8BG30 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.89
NelfaQ8BG30 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
NelfaQ8BG30 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
NelfaQ8BG30 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26.81■■□□□ 1.88
NelfaQ8BG30 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
NelfaQ8BG30 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.71■■□□□ 1.87
NelfaQ8BG30 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.7■■□□□ 1.86
NelfaQ8BG30 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
NelfaQ8BG30 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
NelfaQ8BG30 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.48■■□□□ 1.83
NelfaQ8BG30 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
NelfaQ8BG30 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
NelfaQ8BG30 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NelfaQ8BG30 Gm25238-201ENSMUST00000174914 89 ntBASIC26.26■■□□□ 1.79
NelfaQ8BG30 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.24■■□□□ 1.79
NelfaQ8BG30 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.17■■□□□ 1.78
NelfaQ8BG30 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
NelfaQ8BG30 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
NelfaQ8BG30 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
NelfaQ8BG30 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
NelfaQ8BG30 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
NelfaQ8BG30 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
NelfaQ8BG30 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
NelfaQ8BG30 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC25.73■■□□□ 1.71
NelfaQ8BG30 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.73■■□□□ 1.71
NelfaQ8BG30 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
NelfaQ8BG30 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC25.68■■□□□ 1.7
NelfaQ8BG30 Gm27325-201ENSMUST00000175467 74 ntBASIC25.63■■□□□ 1.69
NelfaQ8BG30 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
NelfaQ8BG30 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
NelfaQ8BG30 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.58■■□□□ 1.69
NelfaQ8BG30 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
NelfaQ8BG30 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
NelfaQ8BG30 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
NelfaQ8BG30 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC25.43■■□□□ 1.66
NelfaQ8BG30 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
NelfaQ8BG30 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
NelfaQ8BG30 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
NelfaQ8BG30 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
NelfaQ8BG30 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.32■■□□□ 1.64
NelfaQ8BG30 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC25.32■■□□□ 1.64
NelfaQ8BG30 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
NelfaQ8BG30 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
NelfaQ8BG30 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.2■■□□□ 1.62
NelfaQ8BG30 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
NelfaQ8BG30 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.11■■□□□ 1.61
NelfaQ8BG30 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
NelfaQ8BG30 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
NelfaQ8BG30 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NelfaQ8BG30 Rab21-202ENSMUST00000218831 843 ntBASIC25.07■■□□□ 1.6
NelfaQ8BG30 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
NelfaQ8BG30 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
NelfaQ8BG30 Gm25262-201ENSMUST00000174934 133 ntBASIC25.04■■□□□ 1.6
NelfaQ8BG30 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
NelfaQ8BG30 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
NelfaQ8BG30 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.97■■□□□ 1.59
NelfaQ8BG30 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
NelfaQ8BG30 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24.93■■□□□ 1.58
NelfaQ8BG30 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
NelfaQ8BG30 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.82■■□□□ 1.56
NelfaQ8BG30 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
NelfaQ8BG30 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
NelfaQ8BG30 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.82■■□□□ 1.56
NelfaQ8BG30 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC24.8■■□□□ 1.56
NelfaQ8BG30 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
NelfaQ8BG30 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
NelfaQ8BG30 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
NelfaQ8BG30 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
NelfaQ8BG30 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24.66■■□□□ 1.54
NelfaQ8BG30 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
NelfaQ8BG30 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NelfaQ8BG30 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC24.63■■□□□ 1.53
NelfaQ8BG30 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
NelfaQ8BG30 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
NelfaQ8BG30 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC24.53■■□□□ 1.52
NelfaQ8BG30 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
NelfaQ8BG30 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 296.5 ms