RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 KLK15Q9H2R5 256 aa9.41□□□□□ -0.9
CAPN3-220ENST00000569827 PLSCR3Q9NRY6 295 aa9.41□□□□□ -0.9
CAPN3-220ENST00000569827 LIN7CQ9NUP9 197 aaKnown RBP9.41□□□□□ -0.9
CAPN3-220ENST00000569827 ZMAT5Q9UDW3 170 aaKnown RBP9.41□□□□□ -0.9
CAPN3-220ENST00000569827 PLECQ15149 4684 aaKnown RBP9.41□□□□□ -0.9
CAPN3-220ENST00000569827 G3V318 75 aa9.4□□□□□ -0.9
CAPN3-220ENST00000569827 J3QRE1 110 aa9.4□□□□□ -0.9
CAPN3-220ENST00000569827 SDCBPO00560 298 aaPredicted RBP9.4□□□□□ -0.9
CAPN3-220ENST00000569827 GAPDHP04406 335 aaKnown RBP9.4□□□□□ -0.9
CAPN3-220ENST00000569827 VDAC1P21796 283 aa9.4□□□□□ -0.9
CAPN3-220ENST00000569827 CDX1P47902 265 aaPredicted RBP9.4□□□□□ -0.9
CAPN3-220ENST00000569827 SOX2P48431 317 aa9.4□□□□□ -0.9
CAPN3-220ENST00000569827 GP2P55259 537 aaKnown RBP9.4□□□□□ -0.9
CAPN3-220ENST00000569827 GNB1P62873 340 aa9.4□□□□□ -0.9
CAPN3-220ENST00000569827 FHL3Q13643 280 aa9.4□□□□□ -0.9
CAPN3-220ENST00000569827 KLHL22Q53GT1 634 aa9.4□□□□□ -0.9
CAPN3-220ENST00000569827 LHFPL3Q86UP9 236 aa9.4□□□□□ -0.9
CAPN3-220ENST00000569827 OR10V1Q8NGI7 309 aa9.4□□□□□ -0.9
CAPN3-220ENST00000569827 OR2T10Q8NGZ9 312 aa9.4□□□□□ -0.9
CAPN3-220ENST00000569827 C4orf3Q8WVX3 66 aa9.4□□□□□ -0.9
CAPN3-220ENST00000569827 RTN4IP1Q8WWV3 396 aaPredicted RBP9.4□□□□□ -0.9
CAPN3-220ENST00000569827 RFKQ969G6 155 aa9.4□□□□□ -0.9
CAPN3-220ENST00000569827 ARL11Q969Q4 196 aa9.4□□□□□ -0.9
CAPN3-220ENST00000569827 ORAI1Q96D31 301 aa9.4□□□□□ -0.9
CAPN3-220ENST00000569827 KCTD7Q96MP8 289 aa9.4□□□□□ -0.9
CAPN3-220ENST00000569827 DPCDQ9BVM2 203 aaPredicted RBP9.4□□□□□ -0.9
CAPN3-220ENST00000569827 BARHL1Q9BZE3 327 aa9.4□□□□□ -0.9
CAPN3-220ENST00000569827 ALX4Q9H161 411 aaPredicted RBP9.4□□□□□ -0.9
CAPN3-220ENST00000569827 LINC00574Q9H8X3 128 aa9.4□□□□□ -0.9
CAPN3-220ENST00000569827 TAS2R4Q9NYW5 299 aa9.4□□□□□ -0.9
CAPN3-220ENST00000569827 OAZ3Q9UMX2 235 aa9.4□□□□□ -0.9
CAPN3-220ENST00000569827 WSB1Q9Y6I7 421 aa9.4□□□□□ -0.9
CAPN3-220ENST00000569827 SMAD5-AS1Q9Y6J3 95 aa9.4□□□□□ -0.9
CAPN3-220ENST00000569827 A0A1W2PP11 408 aa9.39□□□□□ -0.91
CAPN3-220ENST00000569827 C15orf65H3BRN8 121 aa9.39□□□□□ -0.91
CAPN3-220ENST00000569827 MPZL2O60487 215 aa9.39□□□□□ -0.91
CAPN3-220ENST00000569827 OR7C1O76099 320 aaPredicted RBP9.39□□□□□ -0.91
CAPN3-220ENST00000569827 ZFPL1O95159 310 aa9.39□□□□□ -0.91
CAPN3-220ENST00000569827 ELANEP08246 267 aa9.39□□□□□ -0.91
CAPN3-220ENST00000569827 DBTP11182 482 aaKnown RBP9.39□□□□□ -0.91
CAPN3-220ENST00000569827 FASP25445 335 aa9.39□□□□□ -0.91
CAPN3-220ENST00000569827 CNTFRP26992 372 aa9.39□□□□□ -0.91
CAPN3-220ENST00000569827 PSMB8P28062 276 aa9.39□□□□□ -0.91
CAPN3-220ENST00000569827 CHATP28329 748 aa9.39□□□□□ -0.91
CAPN3-220ENST00000569827 IL13RA2Q14627 380 aa9.39□□□□□ -0.91
CAPN3-220ENST00000569827 RSU1Q15404 277 aa9.39□□□□□ -0.91
CAPN3-220ENST00000569827 ZIK1Q3SY52 487 aaPredicted RBP9.39□□□□□ -0.91
CAPN3-220ENST00000569827 ELP2Q6IA86 826 aa9.39□□□□□ -0.91
CAPN3-220ENST00000569827 C5orf24Q7Z6I8 188 aa9.39□□□□□ -0.91
CAPN3-220ENST00000569827 RNF152Q8N8N0 203 aa9.39□□□□□ -0.91
CAPN3-220ENST00000569827 Q8NFD4 153 aa9.39□□□□□ -0.91
CAPN3-220ENST00000569827 CASTOR1Q8WTX7 329 aa9.39□□□□□ -0.91
CAPN3-220ENST00000569827 RGP1Q92546 391 aaPredicted RBP9.39□□□□□ -0.91
CAPN3-220ENST00000569827 LGALS12Q96DT0 336 aa9.39□□□□□ -0.91
CAPN3-220ENST00000569827 RASL11BQ9BPW5 248 aa9.39□□□□□ -0.91
CAPN3-220ENST00000569827 ALG8Q9BVK2 526 aa9.39□□□□□ -0.91
CAPN3-220ENST00000569827 RHOFQ9HBH0 211 aa9.39□□□□□ -0.91
CAPN3-220ENST00000569827 ISYNA1Q9NPH2 558 aa9.39□□□□□ -0.91
CAPN3-220ENST00000569827 FAM118AQ9NWS6 357 aa9.39□□□□□ -0.91
CAPN3-220ENST00000569827 IMPAD1Q9NX62 359 aa9.39□□□□□ -0.91
CAPN3-220ENST00000569827 DHDHQ9UQ10 334 aa9.39□□□□□ -0.91
CAPN3-220ENST00000569827 ALMS1Q8TCU4 4167 aa9.38□□□□□ -0.91
CAPN3-220ENST00000569827 TRIM64CA6NLI5 447 aa9.38□□□□□ -0.91
CAPN3-220ENST00000569827 GEMIN2O14893 280 aaKnown RBP9.38□□□□□ -0.91
CAPN3-220ENST00000569827 RRP9O43818 475 aaKnown RBP9.38□□□□□ -0.91
CAPN3-220ENST00000569827 MOSP00540 346 aa9.38□□□□□ -0.91
CAPN3-220ENST00000569827 IGHG4P01861 327 aa9.38□□□□□ -0.91
CAPN3-220ENST00000569827 SPNP16150 400 aa9.38□□□□□ -0.91
CAPN3-220ENST00000569827 SERPINA2P20848 420 aa9.38□□□□□ -0.91
CAPN3-220ENST00000569827 SOX6P35712 828 aa9.38□□□□□ -0.91
CAPN3-220ENST00000569827 CCR9P51686 369 aa9.38□□□□□ -0.91
CAPN3-220ENST00000569827 GTF2A1P52655 376 aaPredicted RBP9.38□□□□□ -0.91
CAPN3-220ENST00000569827 SLURP1P55000 103 aa9.38□□□□□ -0.91
CAPN3-220ENST00000569827 TMED1Q13445 227 aa9.38□□□□□ -0.91
CAPN3-220ENST00000569827 ATAD3CQ5T2N8 411 aa9.38□□□□□ -0.91
CAPN3-220ENST00000569827 HAPLN4Q86UW8 402 aa9.38□□□□□ -0.91
CAPN3-220ENST00000569827 SERPINA12Q8IW75 414 aa9.38□□□□□ -0.91
CAPN3-220ENST00000569827 PRR18Q8N4B5 295 aa9.38□□□□□ -0.91
CAPN3-220ENST00000569827 FAM71E2Q8N5Q1 922 aa9.38□□□□□ -0.91
CAPN3-220ENST00000569827 ACBD7Q8N6N7 88 aa9.38□□□□□ -0.91
CAPN3-220ENST00000569827 OR5D14Q8NGL3 314 aa9.38□□□□□ -0.91
CAPN3-220ENST00000569827 NEK7Q8TDX7 302 aa9.38□□□□□ -0.91
CAPN3-220ENST00000569827 DCUN1D4Q92564 292 aa9.38□□□□□ -0.91
CAPN3-220ENST00000569827 ST6GALNAC6Q969X2 333 aa9.38□□□□□ -0.91
CAPN3-220ENST00000569827 RITA1Q96K30 269 aa9.38□□□□□ -0.91
CAPN3-220ENST00000569827 AMBNQ9NP70 447 aa9.38□□□□□ -0.91
CAPN3-220ENST00000569827 GFOD1Q9NXC2 390 aa9.38□□□□□ -0.91
CAPN3-220ENST00000569827 ENOPH1Q9UHY7 261 aa9.38□□□□□ -0.91
CAPN3-220ENST00000569827 ING4Q9UNL4 249 aa9.38□□□□□ -0.91
CAPN3-220ENST00000569827 ST3GAL6Q9Y274 331 aa9.38□□□□□ -0.91
CAPN3-220ENST00000569827 AP4S1Q9Y587 144 aa9.38□□□□□ -0.91
CAPN3-220ENST00000569827 TMEM30CPA0ZSE6 113 aa9.37□□□□□ -0.91
CAPN3-220ENST00000569827 ATP6V0E1O15342 81 aa9.37□□□□□ -0.91
CAPN3-220ENST00000569827 FRMD6-AS1P0C7T7 363 aa9.37□□□□□ -0.91
CAPN3-220ENST00000569827 RAB3AP20336 220 aa9.37□□□□□ -0.91
CAPN3-220ENST00000569827 ZNF134P52741 427 aa9.37□□□□□ -0.91
CAPN3-220ENST00000569827 RBM11P57052 281 aaKnown RBP9.37□□□□□ -0.91
CAPN3-220ENST00000569827 KIAA0141Q14154 515 aaPredicted RBP9.37□□□□□ -0.91
CAPN3-220ENST00000569827 SRSF7Q16629 238 aaKnown RBP eCLIP9.37□□□□□ -0.91
CAPN3-220ENST00000569827 ADAMTSL5Q6ZMM2 481 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms