RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 ANGPTL4Q9BY76 406 aa12.35□□□□□ -0.43
SFSWAP-210ENST00000541286 FAM212BQ9NTI7 297 aaPredicted RBP12.35□□□□□ -0.43
SFSWAP-210ENST00000541286 DKKL1Q9UK85 242 aa12.35□□□□□ -0.43
SFSWAP-210ENST00000541286 DCHS2Q6V1P9 2916 aa12.35□□□□□ -0.43
SFSWAP-210ENST00000541286 OR5H1A6NKK0 313 aa12.35□□□□□ -0.43
SFSWAP-210ENST00000541286 TNFSF11O14788 317 aa12.35□□□□□ -0.43
SFSWAP-210ENST00000541286 IL2RGP31785 369 aa12.35□□□□□ -0.43
SFSWAP-210ENST00000541286 SUCLG1P53597 346 aaKnown RBP12.35□□□□□ -0.43
SFSWAP-210ENST00000541286 HNF4GQ14541 408 aa12.35□□□□□ -0.43
SFSWAP-210ENST00000541286 GGNBP1Q5YKI7 109 aa12.35□□□□□ -0.43
SFSWAP-210ENST00000541286 ZNF880Q6PDB4 577 aa12.35□□□□□ -0.43
SFSWAP-210ENST00000541286 ALKBH3Q96Q83 286 aaPredicted RBP12.35□□□□□ -0.43
SFSWAP-210ENST00000541286 C1orf123Q9NWV4 160 aa12.35□□□□□ -0.43
SFSWAP-210ENST00000541286 STARD10Q9Y365 291 aa12.35□□□□□ -0.43
SFSWAP-210ENST00000541286 HSPB6O14558 160 aa12.34□□□□□ -0.43
SFSWAP-210ENST00000541286 GRB2P62993 217 aaKnown RBP12.34□□□□□ -0.43
SFSWAP-210ENST00000541286 DLK1P80370 383 aa12.34□□□□□ -0.43
SFSWAP-210ENST00000541286 TMEM251Q8N6I4 163 aa12.34□□□□□ -0.43
SFSWAP-210ENST00000541286 POC1AQ8NBT0 407 aa12.34□□□□□ -0.43
SFSWAP-210ENST00000541286 ABHD5Q8WTS1 349 aa12.34□□□□□ -0.43
SFSWAP-210ENST00000541286 EMG1Q92979 244 aaKnown RBP12.34□□□□□ -0.43
SFSWAP-210ENST00000541286 K7ENP7 123 aa12.34□□□□□ -0.43
SFSWAP-210ENST00000541286 TMEM268Q5VZI3 342 aa12.34□□□□□ -0.43
SFSWAP-210ENST00000541286 INO80CQ6PI98 192 aaPredicted RBP12.34□□□□□ -0.43
SFSWAP-210ENST00000541286 C5orf24Q7Z6I8 188 aa12.34□□□□□ -0.43
SFSWAP-210ENST00000541286 HIST3H2BBQ8N257 126 aa12.34□□□□□ -0.43
SFSWAP-210ENST00000541286 NECAP1Q8NC96 275 aa12.34□□□□□ -0.43
SFSWAP-210ENST00000541286 MDS2Q8NDY4 140 aa12.34□□□□□ -0.43
SFSWAP-210ENST00000541286 OSGIN2Q9Y236 505 aa12.34□□□□□ -0.43
SFSWAP-210ENST00000541286 HIVEP3Q5T1R4 2406 aa12.34□□□□□ -0.43
SFSWAP-210ENST00000541286 A0A1W2PNV4 684 aa12.33□□□□□ -0.43
SFSWAP-210ENST00000541286 A6NNC1 897 aa12.33□□□□□ -0.43
SFSWAP-210ENST00000541286 DHRS3O75911 302 aa12.33□□□□□ -0.43
SFSWAP-210ENST00000541286 B4GALT1P15291 398 aa12.33□□□□□ -0.43
SFSWAP-210ENST00000541286 TUBG1P23258 451 aa12.33□□□□□ -0.43
SFSWAP-210ENST00000541286 CLDN15P56746 228 aa12.33□□□□□ -0.43
SFSWAP-210ENST00000541286 SLC35A1P78382 337 aa12.33□□□□□ -0.43
SFSWAP-210ENST00000541286 ELOBQ15370 118 aa12.33□□□□□ -0.43
SFSWAP-210ENST00000541286 PIGYQ3MUY2 71 aa12.33□□□□□ -0.43
SFSWAP-210ENST00000541286 ZNF774Q6NX45 483 aa12.33□□□□□ -0.43
SFSWAP-210ENST00000541286 TMEM68Q96MH6 324 aa12.33□□□□□ -0.43
SFSWAP-210ENST00000541286 SH3BGRL2Q9UJC5 107 aa12.33□□□□□ -0.43
SFSWAP-210ENST00000541286 ICE1Q9Y2F5 2266 aa12.33□□□□□ -0.44
SFSWAP-210ENST00000541286 SEC14L6B5MCN3 397 aa12.33□□□□□ -0.44
SFSWAP-210ENST00000541286 OR5AC1P0C628 307 aa12.33□□□□□ -0.44
SFSWAP-210ENST00000541286 ZNF25P17030 456 aaPredicted RBP12.33□□□□□ -0.44
SFSWAP-210ENST00000541286 MSX1P28360 303 aa12.33□□□□□ -0.44
SFSWAP-210ENST00000541286 SPCS3P61009 180 aa12.33□□□□□ -0.44
SFSWAP-210ENST00000541286 PKIAP61925 76 aa12.33□□□□□ -0.44
SFSWAP-210ENST00000541286 LYZL2Q7Z4W2 148 aa12.33□□□□□ -0.44
SFSWAP-210ENST00000541286 RBMXL3Q8N7X1 1067 aaKnown RBP12.33□□□□□ -0.44
SFSWAP-210ENST00000541286 OR11L1Q8NGX0 322 aa12.33□□□□□ -0.44
SFSWAP-210ENST00000541286 MUCL1Q96DR8 90 aa12.33□□□□□ -0.44
SFSWAP-210ENST00000541286 AKAP6Q13023 2319 aa12.33□□□□□ -0.44
SFSWAP-210ENST00000541286 INTS1Q8N201 2190 aaKnown RBP12.33□□□□□ -0.44
SFSWAP-210ENST00000541286 DHHO43323 396 aa12.33□□□□□ -0.44
SFSWAP-210ENST00000541286 JTBO76095 146 aa12.33□□□□□ -0.44
SFSWAP-210ENST00000541286 CHATP28329 748 aa12.33□□□□□ -0.44
SFSWAP-210ENST00000541286 CYB561D1Q8N8Q1 229 aa12.33□□□□□ -0.44
SFSWAP-210ENST00000541286 TACC2O95359 2948 aa12.33□□□□□ -0.44
SFSWAP-210ENST00000541286 SMCO3A2RU48 225 aa12.32□□□□□ -0.44
SFSWAP-210ENST00000541286 AQP7P3A6NL99 342 aa12.32□□□□□ -0.44
SFSWAP-210ENST00000541286 MPZP25189 248 aa12.32□□□□□ -0.44
SFSWAP-210ENST00000541286 SPIN3Q5JUX0 258 aa12.32□□□□□ -0.44
SFSWAP-210ENST00000541286 TMEM123Q8N131 208 aa12.32□□□□□ -0.44
SFSWAP-210ENST00000541286 ZNF664Q8N3J9 261 aa12.32□□□□□ -0.44
SFSWAP-210ENST00000541286 SGCZQ96LD1 299 aa12.32□□□□□ -0.44
SFSWAP-210ENST00000541286 SCRT1Q9BWW7 348 aa12.32□□□□□ -0.44
SFSWAP-210ENST00000541286 AK3Q9UIJ7 227 aa12.32□□□□□ -0.44
SFSWAP-210ENST00000541286 CHD3Q12873 2000 aaKnown RBP12.32□□□□□ -0.44
SFSWAP-210ENST00000541286 THBS4P35443 961 aa12.32□□□□□ -0.44
SFSWAP-210ENST00000541286 PCP4P48539 62 aa12.32□□□□□ -0.44
SFSWAP-210ENST00000541286 RHEBQ15382 184 aa12.32□□□□□ -0.44
SFSWAP-210ENST00000541286 SLC22A25Q6T423 547 aa12.32□□□□□ -0.44
SFSWAP-210ENST00000541286 RTN4IP1Q8WWV3 396 aaPredicted RBP12.32□□□□□ -0.44
SFSWAP-210ENST00000541286 PIGCQ92535 297 aa12.32□□□□□ -0.44
SFSWAP-210ENST00000541286 CPNE4Q96A23 557 aaPredicted RBP12.32□□□□□ -0.44
SFSWAP-210ENST00000541286 BORCS8Q96FH0 119 aa12.32□□□□□ -0.44
SFSWAP-210ENST00000541286 KCNIP3Q9Y2W7 256 aa12.32□□□□□ -0.44
SFSWAP-210ENST00000541286 MED12LQ86YW9 2145 aa12.32□□□□□ -0.44
SFSWAP-210ENST00000541286 CYC1P08574 325 aa12.32□□□□□ -0.44
SFSWAP-210ENST00000541286 ZNF728P0DKX0 622 aa12.32□□□□□ -0.44
SFSWAP-210ENST00000541286 EIF5AP63241 154 aaKnown RBP12.32□□□□□ -0.44
SFSWAP-210ENST00000541286 CISD2Q8N5K1 135 aaKnown RBP12.32□□□□□ -0.44
SFSWAP-210ENST00000541286 TMEM217Q8N7C4 229 aa12.32□□□□□ -0.44
SFSWAP-210ENST00000541286 ZNF442Q9H7R0 627 aa12.32□□□□□ -0.44
SFSWAP-210ENST00000541286 OR7C1O76099 320 aaPredicted RBP12.31□□□□□ -0.44
SFSWAP-210ENST00000541286 ENDOGQ14249 297 aaKnown RBP12.31□□□□□ -0.44
SFSWAP-210ENST00000541286 WDR25Q64LD2 544 aaPredicted RBP12.31□□□□□ -0.44
SFSWAP-210ENST00000541286 FBXL14Q8N1E6 418 aa12.31□□□□□ -0.44
SFSWAP-210ENST00000541286 FADS6Q8N9I5 356 aa12.31□□□□□ -0.44
SFSWAP-210ENST00000541286 SPTSSAQ969W0 71 aa12.31□□□□□ -0.44
SFSWAP-210ENST00000541286 LIME1Q9H400 295 aa12.31□□□□□ -0.44
SFSWAP-210ENST00000541286 ASH1LQ9NR48 2969 aaKnown RBP12.31□□□□□ -0.44
SFSWAP-210ENST00000541286 CBLN4Q9NTU7 201 aa12.31□□□□□ -0.44
SFSWAP-210ENST00000541286 OR14J1Q9UGF5 321 aa12.31□□□□□ -0.44
SFSWAP-210ENST00000541286 SERPINE3A8MV23 424 aa12.31□□□□□ -0.44
SFSWAP-210ENST00000541286 PHF1O43189 567 aaPredicted RBP12.31□□□□□ -0.44
SFSWAP-210ENST00000541286 RPS2P15880 293 aaKnown RBP12.31□□□□□ -0.44
SFSWAP-210ENST00000541286 FAM189A2Q15884 450 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms