RNA–Protein interactions for RNA: ENST00000521338.1

PCM1-214, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-214ENST00000521338 PHLDA3Q9Y5J5 127 aa1.11□□□□□ -2.23
PCM1-214ENST00000521338 DNMT1P26358 1616 aaKnown RBP1.11□□□□□ -2.23
PCM1-214ENST00000521338 KIAA0232Q92628 1395 aa1.1□□□□□ -2.23
PCM1-214ENST00000521338 RAB3GAP2Q9H2M9 1393 aa1.1□□□□□ -2.23
PCM1-214ENST00000521338 C3orf84H3BNL1 204 aa1.1□□□□□ -2.23
PCM1-214ENST00000521338 J3QRE1 110 aa1.1□□□□□ -2.23
PCM1-214ENST00000521338 LECT2O14960 151 aa1.1□□□□□ -2.23
PCM1-214ENST00000521338 EEF1E1O43324 174 aaKnown RBP1.1□□□□□ -2.23
PCM1-214ENST00000521338 SH2D1AO60880 128 aa1.1□□□□□ -2.23
PCM1-214ENST00000521338 SOX14O95416 240 aa1.1□□□□□ -2.23
PCM1-214ENST00000521338 EPPINO95925 133 aa1.1□□□□□ -2.23
PCM1-214ENST00000521338 GP1BAP07359 652 aa1.1□□□□□ -2.23
PCM1-214ENST00000521338 CTSGP08311 255 aa1.1□□□□□ -2.23
PCM1-214ENST00000521338 ZNF22P17026 224 aaPredicted RBP1.1□□□□□ -2.23
PCM1-214ENST00000521338 UGT2B10P36537 528 aa1.1□□□□□ -2.23
PCM1-214ENST00000521338 INPP1P49441 399 aa1.1□□□□□ -2.23
PCM1-214ENST00000521338 MP68P56378 58 aa1.1□□□□□ -2.23
PCM1-214ENST00000521338 DYNLL1P63167 89 aaKnown RBP1.1□□□□□ -2.23
PCM1-214ENST00000521338 APOFQ13790 326 aa1.1□□□□□ -2.23
PCM1-214ENST00000521338 USF2Q15853 346 aaPredicted RBP1.1□□□□□ -2.23
PCM1-214ENST00000521338 KRTAP6-3Q3LI67 103 aa1.1□□□□□ -2.23
PCM1-214ENST00000521338 PYCR3Q53H96 274 aa1.1□□□□□ -2.23
PCM1-214ENST00000521338 C10orf91Q5T1B1 145 aa1.1□□□□□ -2.23
PCM1-214ENST00000521338 TMPPEQ6ZT21 453 aa1.1□□□□□ -2.23
PCM1-214ENST00000521338 SSX7Q7RTT5 188 aa1.1□□□□□ -2.23
PCM1-214ENST00000521338 TCF23Q7RTU1 214 aa1.1□□□□□ -2.23
PCM1-214ENST00000521338 MSRB3Q8IXL7 192 aa1.1□□□□□ -2.23
PCM1-214ENST00000521338 SELENOHQ8IZQ5 122 aaKnown RBP1.1□□□□□ -2.23
PCM1-214ENST00000521338 SPPL2BQ8TCT7 592 aa1.1□□□□□ -2.23
PCM1-214ENST00000521338 LMX1AQ8TE12 382 aa1.1□□□□□ -2.23
PCM1-214ENST00000521338 DTD1Q8TEA8 209 aa1.1□□□□□ -2.23
PCM1-214ENST00000521338 RORBQ92753 470 aa1.1□□□□□ -2.23
PCM1-214ENST00000521338 RAD51AP1Q96B01 352 aa1.1□□□□□ -2.23
PCM1-214ENST00000521338 OR8B2Q96RD0 313 aa1.1□□□□□ -2.23
PCM1-214ENST00000521338 POTEKPQ9BYX7 375 aa1.1□□□□□ -2.23
PCM1-214ENST00000521338 ALX4Q9H161 411 aaPredicted RBP1.1□□□□□ -2.23
PCM1-214ENST00000521338 METTL17Q9H7H0 456 aaPredicted RBP1.1□□□□□ -2.23
PCM1-214ENST00000521338 RPUSD1Q9UJJ7 312 aaKnown RBP1.1□□□□□ -2.23
PCM1-214ENST00000521338 LINC00588Q9Y4M8 146 aa1.1□□□□□ -2.23
PCM1-214ENST00000521338 URGCP-MRPS24S4R325 110 aa1.1□□□□□ -2.23
PCM1-214ENST00000521338 LCTP09848 1927 aa1.1□□□□□ -2.23
PCM1-214ENST00000521338 USP42Q9H9J4 1324 aaKnown RBP1.1□□□□□ -2.23
PCM1-214ENST00000521338 DOCK6Q96HP0 2047 aa1.1□□□□□ -2.23
PCM1-214ENST00000521338 CACNA1SQ13698 1873 aa1.09□□□□□ -2.23
PCM1-214ENST00000521338 BRD4O60885 1362 aaPredicted RBP1.09□□□□□ -2.23
PCM1-214ENST00000521338 CEP170Q5SW79 1584 aa1.09□□□□□ -2.23
PCM1-214ENST00000521338 EFCAB9A8MZ26 197 aa1.09□□□□□ -2.23
PCM1-214ENST00000521338 ZNF878C9JN71 531 aa1.09□□□□□ -2.23
PCM1-214ENST00000521338 GPR171O14626 319 aa1.09□□□□□ -2.23
PCM1-214ENST00000521338 LIMS3P0CW19 117 aa1.09□□□□□ -2.23
PCM1-214ENST00000521338 LIMS4P0CW20 117 aa1.09□□□□□ -2.23
PCM1-214ENST00000521338 OR12D1P0DN82 309 aa1.09□□□□□ -2.23
PCM1-214ENST00000521338 PSKH1P11801 424 aa1.09□□□□□ -2.23
PCM1-214ENST00000521338 ATF1P18846 271 aa1.09□□□□□ -2.23
PCM1-214ENST00000521338 SYT1P21579 422 aa1.09□□□□□ -2.23
PCM1-214ENST00000521338 RCVRNP35243 200 aa1.09□□□□□ -2.23
PCM1-214ENST00000521338 COILP38432 576 aaPredicted RBP1.09□□□□□ -2.23
PCM1-214ENST00000521338 SPAM1P38567 509 aa1.09□□□□□ -2.23
PCM1-214ENST00000521338 C1QTNF8P60827 252 aa1.09□□□□□ -2.23
PCM1-214ENST00000521338 SKP2Q13309 424 aa1.09□□□□□ -2.23
PCM1-214ENST00000521338 XRCC4Q13426 336 aa1.09□□□□□ -2.23
PCM1-214ENST00000521338 TMED1Q13445 227 aa1.09□□□□□ -2.23
PCM1-214ENST00000521338 ANGPT1Q15389 498 aa1.09□□□□□ -2.23
PCM1-214ENST00000521338 SYCP1Q15431 976 aa1.09□□□□□ -2.23
PCM1-214ENST00000521338 CST6Q15828 149 aa1.09□□□□□ -2.23
PCM1-214ENST00000521338 TMEM249Q2WGJ8 235 aa1.09□□□□□ -2.23
PCM1-214ENST00000521338 HES3Q5TGS1 186 aa1.09□□□□□ -2.23
PCM1-214ENST00000521338 NIPAL1Q6NVV3 410 aa1.09□□□□□ -2.23
PCM1-214ENST00000521338 NOXRED1Q6NXP6 359 aa1.09□□□□□ -2.23
PCM1-214ENST00000521338 SCXQ7RTU7 201 aa1.09□□□□□ -2.23
PCM1-214ENST00000521338 NIT1Q86X76 327 aa1.09□□□□□ -2.23
PCM1-214ENST00000521338 SYCE1Q8N0S2 351 aa1.09□□□□□ -2.23
PCM1-214ENST00000521338 MUC15Q8N387 334 aa1.09□□□□□ -2.23
PCM1-214ENST00000521338 C17orf78Q8N4C9 275 aa1.09□□□□□ -2.23
PCM1-214ENST00000521338 OR10D4PQ8NGN7 298 aa1.09□□□□□ -2.23
PCM1-214ENST00000521338 RNASEH2CQ8TDP1 164 aaKnown RBP1.09□□□□□ -2.23
PCM1-214ENST00000521338 GTF2H4Q92759 462 aa1.09□□□□□ -2.23
PCM1-214ENST00000521338 HIST1H2BAQ96A08 127 aa1.09□□□□□ -2.23
PCM1-214ENST00000521338 HBEGFQ99075 208 aa1.09□□□□□ -2.23
PCM1-214ENST00000521338 OR52A5Q9H2C5 316 aa1.09□□□□□ -2.23
PCM1-214ENST00000521338 DMAC2Q9NW81 257 aa1.09□□□□□ -2.23
PCM1-214ENST00000521338 MRPL16Q9NX20 251 aaKnown RBP1.09□□□□□ -2.23
PCM1-214ENST00000521338 MYO5BQ9ULV0 1848 aa1.09□□□□□ -2.23
PCM1-214ENST00000521338 SHANK3Q9BYB0 1731 aa1.09□□□□□ -2.24
PCM1-214ENST00000521338 PTPRKQ15262 1439 aa1.08□□□□□ -2.24
PCM1-214ENST00000521338 NUP153P49790 1475 aaKnown RBP1.08□□□□□ -2.24
PCM1-214ENST00000521338 IGHV3OR15-7A0A075B7D8 119 aa1.08□□□□□ -2.24
PCM1-214ENST00000521338 IGKV1-12A0A0C4DH73 117 aa1.08□□□□□ -2.24
PCM1-214ENST00000521338 ERICH4A6NGS2 130 aa1.08□□□□□ -2.24
PCM1-214ENST00000521338 IQCF5A8MTL0 148 aa1.08□□□□□ -2.24
PCM1-214ENST00000521338 HSBP1L1C9JCN9 74 aa1.08□□□□□ -2.24
PCM1-214ENST00000521338 KLRC4-KLRK1H3BQV0 150 aa1.08□□□□□ -2.24
PCM1-214ENST00000521338 ZNF73O43830 326 aaPredicted RBP1.08□□□□□ -2.24
PCM1-214ENST00000521338 CDK14O94921 469 aa1.08□□□□□ -2.24
PCM1-214ENST00000521338 LTAP01374 205 aa1.08□□□□□ -2.24
PCM1-214ENST00000521338 IGKV1D-12P01611 117 aa1.08□□□□□ -2.24
PCM1-214ENST00000521338 CRABP1P29762 137 aa1.08□□□□□ -2.24
PCM1-214ENST00000521338 GABRA3P34903 492 aa1.08□□□□□ -2.24
PCM1-214ENST00000521338 FUSP35637 526 aaKnown RBP eCLIP1.08□□□□□ -2.24
PCM1-214ENST00000521338 ACTR1BP42025 376 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms