RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 OR6M1Q8NGM8 313 aa16.66■□□□□ 0.26
TRIM35-203ENST00000521253 CCDC107Q8WV48 283 aa16.66■□□□□ 0.26
TRIM35-203ENST00000521253 CYYR1Q96J86 154 aa16.66■□□□□ 0.26
TRIM35-203ENST00000521253 KCNK15Q9H427 330 aa16.66■□□□□ 0.26
TRIM35-203ENST00000521253 ABCB10Q9NRK6 738 aa16.66■□□□□ 0.26
TRIM35-203ENST00000521253 NDUFB11Q9NX14 153 aa16.66■□□□□ 0.26
TRIM35-203ENST00000521253 AK6Q9Y3D8 172 aaKnown RBP16.66■□□□□ 0.26
TRIM35-203ENST00000521253 TOR1AO14656 332 aa16.65■□□□□ 0.26
TRIM35-203ENST00000521253 FUT3P21217 361 aa16.65■□□□□ 0.26
TRIM35-203ENST00000521253 LTC4SQ16873 150 aa16.65■□□□□ 0.26
TRIM35-203ENST00000521253 HLA-DRB5Q30154 266 aa16.65■□□□□ 0.26
TRIM35-203ENST00000521253 UBE2UQ5VVX9 321 aa16.65■□□□□ 0.26
TRIM35-203ENST00000521253 LEAP2Q969E1 77 aa16.65■□□□□ 0.26
TRIM35-203ENST00000521253 ETAA1Q9NY74 926 aa16.65■□□□□ 0.26
TRIM35-203ENST00000521253 DPM3Q9P2X0 92 aa16.65■□□□□ 0.26
TRIM35-203ENST00000521253 TCF19Q9Y242 345 aa16.65■□□□□ 0.26
TRIM35-203ENST00000521253 LRRC42Q9Y546 428 aa16.65■□□□□ 0.26
TRIM35-203ENST00000521253 AIPO00170 330 aa16.64■□□□□ 0.25
TRIM35-203ENST00000521253 CHST1O43916 411 aa16.64■□□□□ 0.25
TRIM35-203ENST00000521253 PDCD6O75340 191 aa16.64■□□□□ 0.25
TRIM35-203ENST00000521253 TSPAN9O75954 239 aa16.64■□□□□ 0.25
TRIM35-203ENST00000521253 IGHV3-7P01780 117 aa16.64■□□□□ 0.25
TRIM35-203ENST00000521253 GZMHP20718 246 aa16.64■□□□□ 0.25
TRIM35-203ENST00000521253 DYNLT3P51808 116 aa16.64■□□□□ 0.25
TRIM35-203ENST00000521253 PRRX1P54821 245 aa16.64■□□□□ 0.25
TRIM35-203ENST00000521253 RPS27AP62979 156 aaKnown RBP16.64■□□□□ 0.25
TRIM35-203ENST00000521253 QRFPP83859 136 aa16.64■□□□□ 0.25
TRIM35-203ENST00000521253 UNC119Q13432 240 aa16.64■□□□□ 0.25
TRIM35-203ENST00000521253 P2RY14Q15391 338 aa16.64■□□□□ 0.25
TRIM35-203ENST00000521253 OR10A7Q8NGE5 316 aa16.64■□□□□ 0.25
TRIM35-203ENST00000521253 OR9G1Q8NH87 305 aa16.64■□□□□ 0.25
TRIM35-203ENST00000521253 WFDC12Q8WWY7 111 aa16.64■□□□□ 0.25
TRIM35-203ENST00000521253 TMEM59Q9BXS4 323 aa16.64■□□□□ 0.25
TRIM35-203ENST00000521253 C16orf95Q9H693 158 aa16.64■□□□□ 0.25
TRIM35-203ENST00000521253 PLGRKTQ9HBL7 147 aa16.64■□□□□ 0.25
TRIM35-203ENST00000521253 RAB18Q9NP72 206 aa16.64■□□□□ 0.25
TRIM35-203ENST00000521253 RNF114Q9Y508 228 aa16.64■□□□□ 0.25
TRIM35-203ENST00000521253 TMEM14DPA8MWL7 114 aa16.63■□□□□ 0.25
TRIM35-203ENST00000521253 LEUTXA8MZ59 168 aa16.63■□□□□ 0.25
TRIM35-203ENST00000521253 C15orf65H3BRN8 121 aa16.63■□□□□ 0.25
TRIM35-203ENST00000521253 BUB1B-PAK6H3BSN5 160 aa16.63■□□□□ 0.25
TRIM35-203ENST00000521253 SLC17A2O00624 439 aa16.63■□□□□ 0.25
TRIM35-203ENST00000521253 BPNT1O95861 308 aa16.63■□□□□ 0.25
TRIM35-203ENST00000521253 GLAP06280 429 aa16.63■□□□□ 0.25
TRIM35-203ENST00000521253 CD200R1LQ6Q8B3 271 aa16.63■□□□□ 0.25
TRIM35-203ENST00000521253 CCBE1Q6UXH8 406 aaPredicted RBP16.63■□□□□ 0.25
TRIM35-203ENST00000521253 LIAT1Q6ZQX7 453 aa16.63■□□□□ 0.25
TRIM35-203ENST00000521253 GAPTQ8N292 157 aa16.63■□□□□ 0.25
TRIM35-203ENST00000521253 KCNG3Q8TAE7 436 aa16.63■□□□□ 0.25
TRIM35-203ENST00000521253 UBALD1Q8TB05 177 aa16.63■□□□□ 0.25
TRIM35-203ENST00000521253 ARL11Q969Q4 196 aa16.63■□□□□ 0.25
TRIM35-203ENST00000521253 MMP28Q9H239 520 aa16.63■□□□□ 0.25
TRIM35-203ENST00000521253 PSG11Q9UQ72 335 aa16.63■□□□□ 0.25
TRIM35-203ENST00000521253 UBE2QL1A1L167 161 aa16.62■□□□□ 0.25
TRIM35-203ENST00000521253 A6NDX4 124 aa16.62■□□□□ 0.25
TRIM35-203ENST00000521253 LY6LH3BQJ8 138 aa16.62■□□□□ 0.25
TRIM35-203ENST00000521253 H3BUI4 141 aa16.62■□□□□ 0.25
TRIM35-203ENST00000521253 F2RL2O00254 374 aa16.62■□□□□ 0.25
TRIM35-203ENST00000521253 CCRL2O00421 344 aa16.62■□□□□ 0.25
TRIM35-203ENST00000521253 ORC5O43913 435 aa16.62■□□□□ 0.25
TRIM35-203ENST00000521253 PSMB9P28065 219 aa16.62■□□□□ 0.25
TRIM35-203ENST00000521253 SRSF4Q08170 494 aaKnown RBP16.62■□□□□ 0.25
TRIM35-203ENST00000521253 RAB11BQ15907 218 aa16.62■□□□□ 0.25
TRIM35-203ENST00000521253 NKAPLQ5M9Q1 402 aa16.62■□□□□ 0.25
TRIM35-203ENST00000521253 SYT6Q5T7P8 510 aaPredicted RBP16.62■□□□□ 0.25
TRIM35-203ENST00000521253 ZNF773Q6PK81 442 aa16.62■□□□□ 0.25
TRIM35-203ENST00000521253 TMEM219Q86XT9 240 aa16.62■□□□□ 0.25
TRIM35-203ENST00000521253 OR4K15Q8NH41 348 aa16.62■□□□□ 0.25
TRIM35-203ENST00000521253 FCGR1BQ92637 280 aa16.62■□□□□ 0.25
TRIM35-203ENST00000521253 CREB3L1Q96BA8 519 aa16.62■□□□□ 0.25
TRIM35-203ENST00000521253 NICN1Q9BSH3 213 aa16.62■□□□□ 0.25
TRIM35-203ENST00000521253 TRAPPC2LQ9UL33 140 aa16.62■□□□□ 0.25
TRIM35-203ENST00000521253 TRRAPQ9Y4A5 3859 aa16.62■□□□□ 0.25
TRIM35-203ENST00000521253 NBEAL1Q6ZS30 2694 aa16.61■□□□□ 0.25
TRIM35-203ENST00000521253 TRDV1A0A1B0GX56 115 aa16.61■□□□□ 0.25
TRIM35-203ENST00000521253 J3QR06 171 aa16.61■□□□□ 0.25
TRIM35-203ENST00000521253 CA11O75493 328 aa16.61■□□□□ 0.25
TRIM35-203ENST00000521253 ARSBP15848 533 aa16.61■□□□□ 0.25
TRIM35-203ENST00000521253 CHATP28329 748 aa16.61■□□□□ 0.25
TRIM35-203ENST00000521253 PROK1P58294 105 aa16.61■□□□□ 0.25
TRIM35-203ENST00000521253 TPTE2P1Q5T6R2 138 aa16.61■□□□□ 0.25
TRIM35-203ENST00000521253 TM2D1Q9BX74 207 aa16.61■□□□□ 0.25
TRIM35-203ENST00000521253 PITPNC1Q9UKF7 332 aa16.61■□□□□ 0.25
TRIM35-203ENST00000521253 SHISA3A0PJX4 238 aa16.6■□□□□ 0.25
TRIM35-203ENST00000521253 C12orf77C9JDV5 145 aa16.6■□□□□ 0.25
TRIM35-203ENST00000521253 CEACAM3P40198 252 aa16.6■□□□□ 0.25
TRIM35-203ENST00000521253 GNG10P50151 68 aa16.6■□□□□ 0.25
TRIM35-203ENST00000521253 CLDN12P56749 244 aa16.6■□□□□ 0.25
TRIM35-203ENST00000521253 SLC16A12Q6ZSM3 486 aa16.6■□□□□ 0.25
TRIM35-203ENST00000521253 OR2W3Q7Z3T1 314 aa16.6■□□□□ 0.25
TRIM35-203ENST00000521253 OR4C13Q8NGP0 309 aa16.6■□□□□ 0.25
TRIM35-203ENST00000521253 SGMS2Q8NHU3 365 aa16.6■□□□□ 0.25
TRIM35-203ENST00000521253 NEDD4LQ96PU5 975 aa16.6■□□□□ 0.25
TRIM35-203ENST00000521253 SULT4A1Q9BR01 284 aa16.6■□□□□ 0.25
TRIM35-203ENST00000521253 NPFFR1Q9GZQ6 430 aa16.6■□□□□ 0.25
TRIM35-203ENST00000521253 V9GY05 133 aa16.6■□□□□ 0.25
TRIM35-203ENST00000521253 PKD1L1Q8TDX9 2849 aa16.59■□□□□ 0.25
TRIM35-203ENST00000521253 A0A0A6YYD4 124 aa16.59■□□□□ 0.25
TRIM35-203ENST00000521253 TRAV1-2A0A0B4J238 106 aa16.59■□□□□ 0.25
TRIM35-203ENST00000521253 SDCBPO00560 298 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms