RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 OR2W3Q7Z3T1 314 aa14.55□□□□□ -0.08
HDAC6-225ENST00000483506 OR4F5Q8NH21 305 aa14.55□□□□□ -0.08
HDAC6-225ENST00000483506 TAF15Q92804 592 aaKnown RBP eCLIP14.55□□□□□ -0.08
HDAC6-225ENST00000483506 TMEM59Q9BXS4 323 aa14.55□□□□□ -0.08
HDAC6-225ENST00000483506 IDI2-AS1Q9NZ38 188 aa14.55□□□□□ -0.08
HDAC6-225ENST00000483506 FBLN5Q9UBX5 448 aa14.55□□□□□ -0.08
HDAC6-225ENST00000483506 PEX16Q9Y5Y5 336 aa14.55□□□□□ -0.08
HDAC6-225ENST00000483506 SHISA3A0PJX4 238 aa14.54□□□□□ -0.08
HDAC6-225ENST00000483506 POM121CA8CG34 1229 aa14.54□□□□□ -0.08
HDAC6-225ENST00000483506 C15orf65H3BRN8 121 aa14.54□□□□□ -0.08
HDAC6-225ENST00000483506 ORC5O43913 435 aa14.54□□□□□ -0.08
HDAC6-225ENST00000483506 PAX6P26367 422 aa14.54□□□□□ -0.08
HDAC6-225ENST00000483506 PSMB9P28065 219 aa14.54□□□□□ -0.08
HDAC6-225ENST00000483506 HTR1DP28221 377 aa14.54□□□□□ -0.08
HDAC6-225ENST00000483506 HLA-DRB5Q30154 266 aa14.54□□□□□ -0.08
HDAC6-225ENST00000483506 OR10K2Q6IF99 312 aa14.54□□□□□ -0.08
HDAC6-225ENST00000483506 LIAT1Q6ZQX7 453 aa14.54□□□□□ -0.08
HDAC6-225ENST00000483506 NEK7Q8TDX7 302 aa14.54□□□□□ -0.08
HDAC6-225ENST00000483506 CREB3L1Q96BA8 519 aa14.54□□□□□ -0.08
HDAC6-225ENST00000483506 ZNF747Q9BV97 191 aa14.54□□□□□ -0.08
HDAC6-225ENST00000483506 PLGRKTQ9HBL7 147 aa14.54□□□□□ -0.08
HDAC6-225ENST00000483506 ETAA1Q9NY74 926 aa14.54□□□□□ -0.08
HDAC6-225ENST00000483506 V9GY05 133 aa14.54□□□□□ -0.08
HDAC6-225ENST00000483506 AIPO00170 330 aa14.53□□□□□ -0.08
HDAC6-225ENST00000483506 ARSBP15848 533 aa14.53□□□□□ -0.08
HDAC6-225ENST00000483506 MDKP21741 143 aaPredicted RBP14.53□□□□□ -0.08
HDAC6-225ENST00000483506 CHATP28329 748 aa14.53□□□□□ -0.08
HDAC6-225ENST00000483506 FGF9P31371 208 aaPredicted RBP14.53□□□□□ -0.08
HDAC6-225ENST00000483506 RAB11BQ15907 218 aa14.53□□□□□ -0.08
HDAC6-225ENST00000483506 SSX2Q16385 188 aa14.53□□□□□ -0.08
HDAC6-225ENST00000483506 UTF1Q5T230 341 aa14.53□□□□□ -0.08
HDAC6-225ENST00000483506 SYT6Q5T7P8 510 aaPredicted RBP14.53□□□□□ -0.08
HDAC6-225ENST00000483506 DHRS7BQ6IAN0 325 aaPredicted RBP14.53□□□□□ -0.08
HDAC6-225ENST00000483506 C3orf56Q8N813 242 aa14.53□□□□□ -0.08
HDAC6-225ENST00000483506 OR52M1Q8NGK5 317 aa14.53□□□□□ -0.08
HDAC6-225ENST00000483506 OR9G1Q8NH87 305 aa14.53□□□□□ -0.08
HDAC6-225ENST00000483506 KCNK15Q9H427 330 aa14.53□□□□□ -0.08
HDAC6-225ENST00000483506 DPM3Q9P2X0 92 aa14.53□□□□□ -0.08
HDAC6-225ENST00000483506 TRAV39A0A0B4J263 110 aa14.52□□□□□ -0.09
HDAC6-225ENST00000483506 FAM172BPA6NC97 362 aa14.52□□□□□ -0.09
HDAC6-225ENST00000483506 LY6LH3BQJ8 138 aa14.52□□□□□ -0.09
HDAC6-225ENST00000483506 PDCD5O14737 125 aa14.52□□□□□ -0.09
HDAC6-225ENST00000483506 TSPAN9O75954 239 aa14.52□□□□□ -0.09
HDAC6-225ENST00000483506 PRRX1P54821 245 aa14.52□□□□□ -0.09
HDAC6-225ENST00000483506 FAM89BQ8N5H3 189 aa14.52□□□□□ -0.09
HDAC6-225ENST00000483506 NDNFQ8TB73 568 aa14.52□□□□□ -0.09
HDAC6-225ENST00000483506 C16orf95Q9H693 158 aa14.52□□□□□ -0.09
HDAC6-225ENST00000483506 BEX1Q9HBH7 125 aa14.52□□□□□ -0.09
HDAC6-225ENST00000483506 RAB18Q9NP72 206 aa14.52□□□□□ -0.09
HDAC6-225ENST00000483506 STUB1Q9UNE7 303 aa14.52□□□□□ -0.09
HDAC6-225ENST00000483506 TCF19Q9Y242 345 aa14.52□□□□□ -0.09
HDAC6-225ENST00000483506 A0A0A6YYD4 124 aa14.51□□□□□ -0.09
HDAC6-225ENST00000483506 CLPSL1A2RUU4 121 aa14.51□□□□□ -0.09
HDAC6-225ENST00000483506 LEUTXA8MZ59 168 aa14.51□□□□□ -0.09
HDAC6-225ENST00000483506 BUB1B-PAK6H3BSN5 160 aa14.51□□□□□ -0.09
HDAC6-225ENST00000483506 J3QR06 171 aa14.51□□□□□ -0.09
HDAC6-225ENST00000483506 F2RL2O00254 374 aa14.51□□□□□ -0.09
HDAC6-225ENST00000483506 TOR1AO14656 332 aa14.51□□□□□ -0.09
HDAC6-225ENST00000483506 LDLRAD4O15165 306 aa14.51□□□□□ -0.09
HDAC6-225ENST00000483506 MYL9P24844 172 aa14.51□□□□□ -0.09
HDAC6-225ENST00000483506 NFYBP25208 207 aa14.51□□□□□ -0.09
HDAC6-225ENST00000483506 P2RY14Q15391 338 aa14.51□□□□□ -0.09
HDAC6-225ENST00000483506 FAM189A2Q15884 450 aa14.51□□□□□ -0.09
HDAC6-225ENST00000483506 TMEM30BQ3MIR4 351 aa14.51□□□□□ -0.09
HDAC6-225ENST00000483506 Q3ZCU0 254 aa14.51□□□□□ -0.09
HDAC6-225ENST00000483506 C6orf183Q5T699 404 aa14.51□□□□□ -0.09
HDAC6-225ENST00000483506 TRAT1Q6PIZ9 186 aa14.51□□□□□ -0.09
HDAC6-225ENST00000483506 Q6ZSV7 163 aa14.51□□□□□ -0.09
HDAC6-225ENST00000483506 ZNF554Q86TJ5 538 aa14.51□□□□□ -0.09
HDAC6-225ENST00000483506 RFESDQ8TAC1 157 aa14.51□□□□□ -0.09
HDAC6-225ENST00000483506 ARL11Q969Q4 196 aa14.51□□□□□ -0.09
HDAC6-225ENST00000483506 FAM3DQ96BQ1 224 aa14.51□□□□□ -0.09
HDAC6-225ENST00000483506 NEDD4LQ96PU5 975 aa14.51□□□□□ -0.09
HDAC6-225ENST00000483506 NICN1Q9BSH3 213 aa14.51□□□□□ -0.09
HDAC6-225ENST00000483506 LPAR5Q9H1C0 372 aa14.51□□□□□ -0.09
HDAC6-225ENST00000483506 MMP28Q9H239 520 aa14.51□□□□□ -0.09
HDAC6-225ENST00000483506 MBNL3Q9NUK0 354 aaKnown RBP14.51□□□□□ -0.09
HDAC6-225ENST00000483506 STEAP1Q9UHE8 339 aa14.51□□□□□ -0.09
HDAC6-225ENST00000483506 HILPDAQ9Y5L2 63 aa14.51□□□□□ -0.09
HDAC6-225ENST00000483506 FOXI3A8MTJ6 420 aaPredicted RBP14.5□□□□□ -0.09
HDAC6-225ENST00000483506 OOSP1A8MZH6 123 aa14.5□□□□□ -0.09
HDAC6-225ENST00000483506 C12orf77C9JDV5 145 aa14.5□□□□□ -0.09
HDAC6-225ENST00000483506 RRP9O43818 475 aaKnown RBP14.5□□□□□ -0.09
HDAC6-225ENST00000483506 CEACAM3P40198 252 aa14.5□□□□□ -0.09
HDAC6-225ENST00000483506 LOXL3P58215 753 aa14.5□□□□□ -0.09
HDAC6-225ENST00000483506 LY6EQ16553 131 aa14.5□□□□□ -0.09
HDAC6-225ENST00000483506 OLFML2AQ68BL7 652 aa14.5□□□□□ -0.09
HDAC6-225ENST00000483506 C22orf42Q6IC83 251 aa14.5□□□□□ -0.09
HDAC6-225ENST00000483506 C8orf31Q8N9H6 132 aa14.5□□□□□ -0.09
HDAC6-225ENST00000483506 OR51D1Q8NGF3 324 aa14.5□□□□□ -0.09
HDAC6-225ENST00000483506 LINC01006Q8NI28 216 aa14.5□□□□□ -0.09
HDAC6-225ENST00000483506 MRPL30Q8TCC3 161 aaKnown RBP14.5□□□□□ -0.09
HDAC6-225ENST00000483506 CCDC107Q8WV48 283 aa14.5□□□□□ -0.09
HDAC6-225ENST00000483506 CYYR1Q96J86 154 aa14.5□□□□□ -0.09
HDAC6-225ENST00000483506 SULT4A1Q9BR01 284 aa14.5□□□□□ -0.09
HDAC6-225ENST00000483506 URM1Q9BTM9 101 aaKnown RBP14.5□□□□□ -0.09
HDAC6-225ENST00000483506 RAB9BQ9NP90 201 aa14.5□□□□□ -0.09
HDAC6-225ENST00000483506 ABCB10Q9NRK6 738 aa14.5□□□□□ -0.09
HDAC6-225ENST00000483506 TXNL4BQ9NX01 149 aaKnown RBP14.5□□□□□ -0.09
HDAC6-225ENST00000483506 PSG11Q9UQ72 335 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms