RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 CLDN14O95500 239 aa13.47□□□□□ -0.25
PTPRF-206ENST00000429895 CELA2AP08217 269 aa13.47□□□□□ -0.25
PTPRF-206ENST00000429895 ITGB4P16144 1822 aa13.47□□□□□ -0.25
PTPRF-206ENST00000429895 HLA-DRB5Q30154 266 aa13.47□□□□□ -0.25
PTPRF-206ENST00000429895 CLLU1Q5K131 121 aa13.47□□□□□ -0.25
PTPRF-206ENST00000429895 MUC15Q8N387 334 aa13.47□□□□□ -0.25
PTPRF-206ENST00000429895 MAP1LC3CQ9BXW4 147 aa13.47□□□□□ -0.25
PTPRF-206ENST00000429895 ZNF253O75346 499 aa13.47□□□□□ -0.25
PTPRF-206ENST00000429895 BSXQ3C1V8 233 aa13.47□□□□□ -0.25
PTPRF-206ENST00000429895 C19orf57Q0VDD7 668 aa13.46□□□□□ -0.25
PTPRF-206ENST00000429895 RRN3P1Q2M238 152 aa13.46□□□□□ -0.25
PTPRF-206ENST00000429895 ADAD2Q8NCV1 583 aaKnown RBP13.46□□□□□ -0.25
PTPRF-206ENST00000429895 ABHD1Q96SE0 405 aa13.46□□□□□ -0.25
PTPRF-206ENST00000429895 HDHD3Q9BSH5 251 aaPredicted RBP13.46□□□□□ -0.25
PTPRF-206ENST00000429895 COLQQ9Y215 455 aaPredicted RBP13.46□□□□□ -0.25
PTPRF-206ENST00000429895 CNTRLQ7Z7A1 2325 aa13.46□□□□□ -0.25
PTPRF-206ENST00000429895 NKX2-6A6NCS4 301 aa13.46□□□□□ -0.25
PTPRF-206ENST00000429895 OR4C46A6NHA9 309 aa13.46□□□□□ -0.25
PTPRF-206ENST00000429895 ZNF385AQ96PM9 386 aaKnown RBP13.46□□□□□ -0.25
PTPRF-206ENST00000429895 PAGE4O60829 102 aa13.46□□□□□ -0.25
PTPRF-206ENST00000429895 PF4V1P10720 104 aa13.46□□□□□ -0.25
PTPRF-206ENST00000429895 KHDC3LQ587J8 217 aa13.46□□□□□ -0.25
PTPRF-206ENST00000429895 ZNF880Q6PDB4 577 aa13.46□□□□□ -0.25
PTPRF-206ENST00000429895 Q9N2K0 584 aa13.46□□□□□ -0.25
PTPRF-206ENST00000429895 CDK5RAP2Q96SN8 1893 aa13.46□□□□□ -0.25
PTPRF-206ENST00000429895 KIF13AQ9H1H9 1805 aa13.46□□□□□ -0.25
PTPRF-206ENST00000429895 GALP22466 123 aa13.46□□□□□ -0.26
PTPRF-206ENST00000429895 LYRM7Q5U5X0 104 aa13.46□□□□□ -0.26
PTPRF-206ENST00000429895 CD300LDQ6UXZ3 194 aa13.46□□□□□ -0.26
PTPRF-206ENST00000429895 SMRP1Q8NCR6 262 aa13.46□□□□□ -0.26
PTPRF-206ENST00000429895 HMGCLL1Q8TB92 370 aa13.46□□□□□ -0.26
PTPRF-206ENST00000429895 RPS4Y2Q8TD47 263 aa13.46□□□□□ -0.26
PTPRF-206ENST00000429895 IL17BQ9UHF5 180 aa13.46□□□□□ -0.26
PTPRF-206ENST00000429895 WIPI2Q9Y4P8 454 aa13.46□□□□□ -0.26
PTPRF-206ENST00000429895 TMEM210A6NLX4 147 aa13.46□□□□□ -0.26
PTPRF-206ENST00000429895 UBE2L6O14933 153 aa13.45□□□□□ -0.26
PTPRF-206ENST00000429895 TEX30Q5JUR7 227 aa13.45□□□□□ -0.26
PTPRF-206ENST00000429895 C19orf48Q6RUI8 117 aa13.45□□□□□ -0.26
PTPRF-206ENST00000429895 OR5A2Q8NGI9 324 aa13.45□□□□□ -0.26
PTPRF-206ENST00000429895 OR1L8Q8NGR8 309 aa13.45□□□□□ -0.26
PTPRF-206ENST00000429895 MYOZ3Q8TDC0 251 aa13.45□□□□□ -0.26
PTPRF-206ENST00000429895 MBD1Q9UIS9 605 aaPredicted RBP13.45□□□□□ -0.26
PTPRF-206ENST00000429895 HIGD1AQ9Y241 93 aa13.45□□□□□ -0.26
PTPRF-206ENST00000429895 J3QR06 171 aa13.45□□□□□ -0.26
PTPRF-206ENST00000429895 GCSHP23434 173 aa13.45□□□□□ -0.26
PTPRF-206ENST00000429895 DMKNQ6E0U4 476 aaPredicted RBP13.45□□□□□ -0.26
PTPRF-206ENST00000429895 FFAR1O14842 300 aa13.45□□□□□ -0.26
PTPRF-206ENST00000429895 NKX2-8O15522 239 aa13.45□□□□□ -0.26
PTPRF-206ENST00000429895 BGLAPP02818 100 aa13.45□□□□□ -0.26
PTPRF-206ENST00000429895 ISXQ2M1V0 245 aa13.45□□□□□ -0.26
PTPRF-206ENST00000429895 SMUG1Q53HV7 270 aa13.45□□□□□ -0.26
PTPRF-206ENST00000429895 TMEM255AQ5JRV8 349 aa13.45□□□□□ -0.26
PTPRF-206ENST00000429895 LYZL2Q7Z4W2 148 aa13.45□□□□□ -0.26
PTPRF-206ENST00000429895 LDLRAD3Q86YD5 345 aa13.45□□□□□ -0.26
PTPRF-206ENST00000429895 LYRM2Q9NU23 88 aaPredicted RBP13.45□□□□□ -0.26
PTPRF-206ENST00000429895 OR2W1Q9Y3N9 320 aa13.45□□□□□ -0.26
PTPRF-206ENST00000429895 LAMA4Q16363 1823 aa13.45□□□□□ -0.26
PTPRF-206ENST00000429895 M0R3E3 92 aa13.45□□□□□ -0.26
PTPRF-206ENST00000429895 RGS13O14921 159 aa13.45□□□□□ -0.26
PTPRF-206ENST00000429895 PRDX2P32119 198 aa13.45□□□□□ -0.26
PTPRF-206ENST00000429895 SCAND1P57086 179 aa13.45□□□□□ -0.26
PTPRF-206ENST00000429895 OR2T10Q8NGZ9 312 aa13.45□□□□□ -0.26
PTPRF-206ENST00000429895 HELTA6NFD8 242 aa13.45□□□□□ -0.26
PTPRF-206ENST00000429895 B2MP61769 119 aa13.45□□□□□ -0.26
PTPRF-206ENST00000429895 DTX4Q9Y2E6 619 aa13.45□□□□□ -0.26
PTPRF-206ENST00000429895 FTH1P19P0C7X4 201 aa13.44□□□□□ -0.26
PTPRF-206ENST00000429895 ELOBQ15370 118 aa13.44□□□□□ -0.26
PTPRF-206ENST00000429895 TWIST1Q15672 202 aa13.44□□□□□ -0.26
PTPRF-206ENST00000429895 IZUMO4Q1ZYL8 232 aa13.44□□□□□ -0.26
PTPRF-206ENST00000429895 CCDC144NLQ6NUI1 221 aa13.44□□□□□ -0.26
PTPRF-206ENST00000429895 FGF11Q92914 225 aa13.44□□□□□ -0.26
PTPRF-206ENST00000429895 MBPP02686 304 aaPredicted RBP13.44□□□□□ -0.26
PTPRF-206ENST00000429895 DAOP14920 347 aa13.44□□□□□ -0.26
PTPRF-206ENST00000429895 GFRA1P56159 465 aa13.44□□□□□ -0.26
PTPRF-206ENST00000429895 GBGT1Q8N5D6 347 aa13.44□□□□□ -0.26
PTPRF-206ENST00000429895 SCMH1Q96GD3 660 aa13.44□□□□□ -0.26
PTPRF-206ENST00000429895 ZNF714Q96N38 554 aa13.44□□□□□ -0.26
PTPRF-206ENST00000429895 GUCD1Q96NT3 240 aa13.44□□□□□ -0.26
PTPRF-206ENST00000429895 PRSS50Q9UI38 385 aa13.44□□□□□ -0.26
PTPRF-206ENST00000429895 NUP205Q92621 2012 aa13.44□□□□□ -0.26
PTPRF-206ENST00000429895 IGKV3D-11A0A0A0MRZ8 115 aa13.44□□□□□ -0.26
PTPRF-206ENST00000429895 IGKV3-11P04433 115 aa13.44□□□□□ -0.26
PTPRF-206ENST00000429895 ZNF273Q14593 569 aa13.44□□□□□ -0.26
PTPRF-206ENST00000429895 EBLN2Q6P2I7 272 aa13.44□□□□□ -0.26
PTPRF-206ENST00000429895 WDFY2Q96P53 400 aa13.44□□□□□ -0.26
PTPRF-206ENST00000429895 KIAA0100Q14667 2235 aaKnown RBP13.44□□□□□ -0.26
PTPRF-206ENST00000429895 KIR3DL2P43630 455 aa13.44□□□□□ -0.26
PTPRF-206ENST00000429895 UCNP55089 124 aa13.44□□□□□ -0.26
PTPRF-206ENST00000429895 RTN4RQ9BZR6 473 aa13.44□□□□□ -0.26
PTPRF-206ENST00000429895 TRAV20A0A0B4J274 112 aa13.44□□□□□ -0.26
PTPRF-206ENST00000429895 RPL36A-HNRNPH2H7BZ11 118 aa13.44□□□□□ -0.26
PTPRF-206ENST00000429895 RCC2Q9P258 522 aaKnown RBP13.44□□□□□ -0.26
PTPRF-206ENST00000429895 SMPD2O60906 423 aa13.43□□□□□ -0.26
PTPRF-206ENST00000429895 IL11P20809 199 aa13.43□□□□□ -0.26
PTPRF-206ENST00000429895 CLDN18P56856 261 aa13.43□□□□□ -0.26
PTPRF-206ENST00000429895 ERVFRD-1P60508 538 aa13.43□□□□□ -0.26
PTPRF-206ENST00000429895 INPP5JQ15735 1006 aaPredicted RBP13.43□□□□□ -0.26
PTPRF-206ENST00000429895 ISOC2Q96AB3 205 aa13.43□□□□□ -0.26
PTPRF-206ENST00000429895 ALS2Q96Q42 1657 aa13.43□□□□□ -0.26
PTPRF-206ENST00000429895 TMEM50BP56557 158 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms