RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 SDC2P34741 201 aa10.25□□□□□ -0.77
GPC1-204ENST00000426280 ALDH3B2P48448 385 aa10.25□□□□□ -0.77
GPC1-204ENST00000426280 RBM11P57052 281 aaKnown RBP10.25□□□□□ -0.77
GPC1-204ENST00000426280 PLA2G7Q13093 441 aa10.25□□□□□ -0.77
GPC1-204ENST00000426280 IL13RA2Q14627 380 aa10.25□□□□□ -0.77
GPC1-204ENST00000426280 HEPN1Q6WQI6 88 aa10.25□□□□□ -0.77
GPC1-204ENST00000426280 ABHD12Q8N2K0 398 aa10.25□□□□□ -0.77
GPC1-204ENST00000426280 SUMF2Q8NBJ7 301 aa10.25□□□□□ -0.77
GPC1-204ENST00000426280 OR51D1Q8NGF3 324 aa10.25□□□□□ -0.77
GPC1-204ENST00000426280 OR6M1Q8NGM8 313 aa10.25□□□□□ -0.77
GPC1-204ENST00000426280 RFESDQ8TAC1 157 aa10.25□□□□□ -0.77
GPC1-204ENST00000426280 LEAP2Q969E1 77 aa10.25□□□□□ -0.77
GPC1-204ENST00000426280 RBMXL1Q96E39 390 aaKnown RBP10.25□□□□□ -0.77
GPC1-204ENST00000426280 FUNDC2Q9BWH2 189 aa10.25□□□□□ -0.77
GPC1-204ENST00000426280 CLEC7AQ9BXN2 247 aa10.25□□□□□ -0.77
GPC1-204ENST00000426280 SELENOIQ9C0D9 397 aa10.25□□□□□ -0.77
GPC1-204ENST00000426280 NAA50Q9GZZ1 169 aaKnown RBP10.25□□□□□ -0.77
GPC1-204ENST00000426280 TAS2R3Q9NYW6 316 aa10.25□□□□□ -0.77
GPC1-204ENST00000426280 TBL2Q9Y4P3 447 aaKnown RBP10.25□□□□□ -0.77
GPC1-204ENST00000426280 TRGV10A0A0A0MS01 117 aa10.24□□□□□ -0.77
GPC1-204ENST00000426280 LY6LH3BQJ8 138 aa10.24□□□□□ -0.77
GPC1-204ENST00000426280 PDCD5O14737 125 aa10.24□□□□□ -0.77
GPC1-204ENST00000426280 ZNF780AO75290 641 aaPredicted RBP10.24□□□□□ -0.77
GPC1-204ENST00000426280 OR7C1O76099 320 aaPredicted RBP10.24□□□□□ -0.77
GPC1-204ENST00000426280 SLC2A2P11168 524 aaPredicted RBP10.24□□□□□ -0.77
GPC1-204ENST00000426280 KIR2DS4P43632 304 aa10.24□□□□□ -0.77
GPC1-204ENST00000426280 BLCAPP62952 87 aa10.24□□□□□ -0.77
GPC1-204ENST00000426280 QRFPP83859 136 aa10.24□□□□□ -0.77
GPC1-204ENST00000426280 UNC119Q13432 240 aa10.24□□□□□ -0.77
GPC1-204ENST00000426280 DIAPH2-AS1Q14236 149 aa10.24□□□□□ -0.77
GPC1-204ENST00000426280 GPR176Q14439 515 aa10.24□□□□□ -0.77
GPC1-204ENST00000426280 RAB11BQ15907 218 aa10.24□□□□□ -0.77
GPC1-204ENST00000426280 AANATQ16613 207 aa10.24□□□□□ -0.77
GPC1-204ENST00000426280 PAN3Q58A45 887 aaKnown RBP10.24□□□□□ -0.77
GPC1-204ENST00000426280 NHLRC3Q5JS37 347 aa10.24□□□□□ -0.77
GPC1-204ENST00000426280 C11orf44Q8N8P7 122 aa10.24□□□□□ -0.77
GPC1-204ENST00000426280 CHST4Q8NCG5 386 aa10.24□□□□□ -0.77
GPC1-204ENST00000426280 UBALD1Q8TB05 177 aa10.24□□□□□ -0.77
GPC1-204ENST00000426280 KCTD7Q96MP8 289 aa10.24□□□□□ -0.77
GPC1-204ENST00000426280 ZNF702PQ9H963 129 aa10.24□□□□□ -0.77
GPC1-204ENST00000426280 FBLN5Q9UBX5 448 aa10.24□□□□□ -0.77
GPC1-204ENST00000426280 TCF19Q9Y242 345 aa10.24□□□□□ -0.77
GPC1-204ENST00000426280 TRRAPQ9Y4A5 3859 aa10.24□□□□□ -0.77
GPC1-204ENST00000426280 MEIKINA0A087WXM9 373 aa10.23□□□□□ -0.77
GPC1-204ENST00000426280 KBTBD11-OT1A0A1B0GTJ5 212 aa10.23□□□□□ -0.77
GPC1-204ENST00000426280 A0A1W2PPE3 182 aa10.23□□□□□ -0.77
GPC1-204ENST00000426280 IFITM5A6NNB3 132 aa10.23□□□□□ -0.77
GPC1-204ENST00000426280 FAM90A22PA8MWA6 464 aa10.23□□□□□ -0.77
GPC1-204ENST00000426280 TMEM14DPA8MWL7 114 aa10.23□□□□□ -0.77
GPC1-204ENST00000426280 UBBP0CG47 229 aa10.23□□□□□ -0.77
GPC1-204ENST00000426280 EFNB2P52799 333 aa10.23□□□□□ -0.77
GPC1-204ENST00000426280 NCS1P62166 190 aa10.23□□□□□ -0.77
GPC1-204ENST00000426280 LTC4SQ16873 150 aa10.23□□□□□ -0.77
GPC1-204ENST00000426280 C2orf76Q3KRA6 126 aa10.23□□□□□ -0.77
GPC1-204ENST00000426280 ATAD3CQ5T2N8 411 aa10.23□□□□□ -0.77
GPC1-204ENST00000426280 TREML4Q6UXN2 200 aa10.23□□□□□ -0.77
GPC1-204ENST00000426280 RTN4RL2Q86UN3 420 aa10.23□□□□□ -0.77
GPC1-204ENST00000426280 MRGPRDQ8TDS7 321 aa10.23□□□□□ -0.77
GPC1-204ENST00000426280 FAM3DQ96BQ1 224 aa10.23□□□□□ -0.77
GPC1-204ENST00000426280 KIRREL1Q96J84 757 aa10.23□□□□□ -0.77
GPC1-204ENST00000426280 Q96M66 194 aa10.23□□□□□ -0.77
GPC1-204ENST00000426280 DPCDQ9BVM2 203 aaPredicted RBP10.23□□□□□ -0.77
GPC1-204ENST00000426280 PCDHB16Q9NRJ7 776 aa10.23□□□□□ -0.77
GPC1-204ENST00000426280 SERTAD4Q9NUC0 356 aa10.23□□□□□ -0.77
GPC1-204ENST00000426280 GHRLQ9UBU3 117 aa10.23□□□□□ -0.77
GPC1-204ENST00000426280 STEAP1Q9UHE8 339 aa10.23□□□□□ -0.77
GPC1-204ENST00000426280 PKD1L1Q8TDX9 2849 aa10.23□□□□□ -0.77
GPC1-204ENST00000426280 A0A087X0M5 115 aa10.22□□□□□ -0.77
GPC1-204ENST00000426280 A0A0A6YYD4 124 aa10.22□□□□□ -0.77
GPC1-204ENST00000426280 TMEM272A0A1B0GTI8 110 aa10.22□□□□□ -0.77
GPC1-204ENST00000426280 A0A1B0GX30 115 aa10.22□□□□□ -0.77
GPC1-204ENST00000426280 SH2D7A6NKC9 451 aaPredicted RBP10.22□□□□□ -0.77
GPC1-204ENST00000426280 ZNF729A6NN14 1252 aaPredicted RBP10.22□□□□□ -0.77
GPC1-204ENST00000426280 NPIPB11E5RHQ5 1161 aa10.22□□□□□ -0.77
GPC1-204ENST00000426280 KCNAB3O43448 404 aa10.22□□□□□ -0.77
GPC1-204ENST00000426280 TSPAN15O95858 294 aa10.22□□□□□ -0.77
GPC1-204ENST00000426280 BPNT1O95861 308 aa10.22□□□□□ -0.77
GPC1-204ENST00000426280 ARSBP15848 533 aa10.22□□□□□ -0.77
GPC1-204ENST00000426280 NFYBP25208 207 aa10.22□□□□□ -0.77
GPC1-204ENST00000426280 CD34P28906 385 aa10.22□□□□□ -0.77
GPC1-204ENST00000426280 SSTR5P35346 364 aa10.22□□□□□ -0.77
GPC1-204ENST00000426280 GLP1RP43220 463 aa10.22□□□□□ -0.77
GPC1-204ENST00000426280 PSMD7P51665 324 aa10.22□□□□□ -0.77
GPC1-204ENST00000426280 VBP1P61758 197 aa10.22□□□□□ -0.77
GPC1-204ENST00000426280 MPV17LQ2QL34 196 aa10.22□□□□□ -0.77
GPC1-204ENST00000426280 TIMM50Q3ZCQ8 353 aa10.22□□□□□ -0.77
GPC1-204ENST00000426280 MINOS1Q5TGZ0 78 aa10.22□□□□□ -0.77
GPC1-204ENST00000426280 GPR107Q5VW38 600 aa10.22□□□□□ -0.77
GPC1-204ENST00000426280 SIGIRRQ6IA17 410 aa10.22□□□□□ -0.77
GPC1-204ENST00000426280 SLC16A12Q6ZSM3 486 aa10.22□□□□□ -0.77
GPC1-204ENST00000426280 NDNFQ8TB73 568 aa10.22□□□□□ -0.77
GPC1-204ENST00000426280 CCDC107Q8WV48 283 aa10.22□□□□□ -0.77
GPC1-204ENST00000426280 MRPS24Q96EL2 167 aaKnown RBP10.22□□□□□ -0.77
GPC1-204ENST00000426280 NICN1Q9BSH3 213 aa10.22□□□□□ -0.77
GPC1-204ENST00000426280 TMEM59Q9BXS4 323 aa10.22□□□□□ -0.77
GPC1-204ENST00000426280 CST11Q9H112 138 aa10.22□□□□□ -0.77
GPC1-204ENST00000426280 CALYQ9NYX4 217 aa10.22□□□□□ -0.77
GPC1-204ENST00000426280 MINOS1-NBL1R4GNA1 71 aa10.22□□□□□ -0.77
GPC1-204ENST00000426280 FUOMA2VDF0 154 aa10.21□□□□□ -0.77
GPC1-204ENST00000426280 NOTOA8MTQ0 251 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms