RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 KCNK15Q9H427 330 aa12.42□□□□□ -0.42
VAPA-201ENST00000340541 SPACA1Q9HBV2 294 aa12.42□□□□□ -0.42
VAPA-201ENST00000340541 LRRC42Q9Y546 428 aa12.42□□□□□ -0.42
VAPA-201ENST00000340541 VWFP04275 2813 aa12.42□□□□□ -0.42
VAPA-201ENST00000340541 TGP01266 2768 aa12.41□□□□□ -0.42
VAPA-201ENST00000340541 SHISA3A0PJX4 238 aa12.41□□□□□ -0.42
VAPA-201ENST00000340541 M0QZ24 198 aa12.41□□□□□ -0.42
VAPA-201ENST00000340541 CALRP27797 417 aaKnown RBP12.41□□□□□ -0.42
VAPA-201ENST00000340541 HTR2CP28335 458 aa12.41□□□□□ -0.42
VAPA-201ENST00000340541 RAB13P51153 203 aa12.41□□□□□ -0.42
VAPA-201ENST00000340541 LY6EQ16553 131 aa12.41□□□□□ -0.42
VAPA-201ENST00000340541 PLA1AQ53H76 456 aa12.41□□□□□ -0.42
VAPA-201ENST00000340541 Q6ZSV7 163 aa12.41□□□□□ -0.42
VAPA-201ENST00000340541 OR6M1Q8NGM8 313 aa12.41□□□□□ -0.42
VAPA-201ENST00000340541 CST11Q9H112 138 aa12.41□□□□□ -0.42
VAPA-201ENST00000340541 IDI2-AS1Q9NZ38 188 aa12.41□□□□□ -0.42
VAPA-201ENST00000340541 AK6Q9Y3D8 172 aaKnown RBP12.41□□□□□ -0.42
VAPA-201ENST00000340541 TMEM14DPA8MWL7 114 aa12.4□□□□□ -0.42
VAPA-201ENST00000340541 MCRIP1C9JLW8 97 aa12.4□□□□□ -0.42
VAPA-201ENST00000340541 C15orf65H3BRN8 121 aa12.4□□□□□ -0.42
VAPA-201ENST00000340541 SLC17A2O00624 439 aa12.4□□□□□ -0.42
VAPA-201ENST00000340541 CHST1O43916 411 aa12.4□□□□□ -0.42
VAPA-201ENST00000340541 MPIG6BO95866 241 aa12.4□□□□□ -0.42
VAPA-201ENST00000340541 FUT3P21217 361 aa12.4□□□□□ -0.42
VAPA-201ENST00000340541 HTR1DP28221 377 aa12.4□□□□□ -0.42
VAPA-201ENST00000340541 DYNLT3P51808 116 aa12.4□□□□□ -0.42
VAPA-201ENST00000340541 RPS27AP62979 156 aaKnown RBP12.4□□□□□ -0.42
VAPA-201ENST00000340541 FAM189A2Q15884 450 aa12.4□□□□□ -0.42
VAPA-201ENST00000340541 HLA-DRB5Q30154 266 aa12.4□□□□□ -0.42
VAPA-201ENST00000340541 DHRS7BQ6IAN0 325 aaPredicted RBP12.4□□□□□ -0.42
VAPA-201ENST00000340541 ZNF773Q6PK81 442 aa12.4□□□□□ -0.42
VAPA-201ENST00000340541 CCBE1Q6UXH8 406 aaPredicted RBP12.4□□□□□ -0.42
VAPA-201ENST00000340541 LINC01006Q8NI28 216 aa12.4□□□□□ -0.42
VAPA-201ENST00000340541 RFESDQ8TAC1 157 aa12.4□□□□□ -0.42
VAPA-201ENST00000340541 ZNF596Q8TC21 504 aa12.4□□□□□ -0.42
VAPA-201ENST00000340541 NEK7Q8TDX7 302 aa12.4□□□□□ -0.42
VAPA-201ENST00000340541 MMP27Q9H306 513 aa12.4□□□□□ -0.42
VAPA-201ENST00000340541 RNF114Q9Y508 228 aa12.4□□□□□ -0.42
VAPA-201ENST00000340541 HILPDAQ9Y5L2 63 aa12.4□□□□□ -0.42
VAPA-201ENST00000340541 PEX16Q9Y5Y5 336 aa12.4□□□□□ -0.42
VAPA-201ENST00000340541 TRDV1A0A1B0GX56 115 aa12.39□□□□□ -0.43
VAPA-201ENST00000340541 LY6LH3BQJ8 138 aa12.39□□□□□ -0.43
VAPA-201ENST00000340541 PDCD6O75340 191 aa12.39□□□□□ -0.43
VAPA-201ENST00000340541 TSPAN9O75954 239 aa12.39□□□□□ -0.43
VAPA-201ENST00000340541 BPNT1O95861 308 aa12.39□□□□□ -0.43
VAPA-201ENST00000340541 GLAP06280 429 aa12.39□□□□□ -0.43
VAPA-201ENST00000340541 NFYBP25208 207 aa12.39□□□□□ -0.43
VAPA-201ENST00000340541 RBM39Q14498 530 aaKnown RBP12.39□□□□□ -0.43
VAPA-201ENST00000340541 P2RY14Q15391 338 aa12.39□□□□□ -0.43
VAPA-201ENST00000340541 OR10A7Q8NGE5 316 aa12.39□□□□□ -0.43
VAPA-201ENST00000340541 KCNG3Q8TAE7 436 aa12.39□□□□□ -0.43
VAPA-201ENST00000340541 NDNFQ8TB73 568 aa12.39□□□□□ -0.43
VAPA-201ENST00000340541 CCDC107Q8WV48 283 aa12.39□□□□□ -0.43
VAPA-201ENST00000340541 FCGR1BQ92637 280 aa12.39□□□□□ -0.43
VAPA-201ENST00000340541 LEAP2Q969E1 77 aa12.39□□□□□ -0.43
VAPA-201ENST00000340541 NICN1Q9BSH3 213 aa12.39□□□□□ -0.43
VAPA-201ENST00000340541 TM2D1Q9BX74 207 aa12.39□□□□□ -0.43
VAPA-201ENST00000340541 C16orf95Q9H693 158 aa12.39□□□□□ -0.43
VAPA-201ENST00000340541 ETAA1Q9NY74 926 aa12.39□□□□□ -0.43
VAPA-201ENST00000340541 DPM3Q9P2X0 92 aa12.39□□□□□ -0.43
VAPA-201ENST00000340541 TCF19Q9Y242 345 aa12.39□□□□□ -0.43
VAPA-201ENST00000340541 A0A0A6YYD4 124 aa12.38□□□□□ -0.43
VAPA-201ENST00000340541 TRAV1-2A0A0B4J238 106 aa12.38□□□□□ -0.43
VAPA-201ENST00000340541 A6NDX4 124 aa12.38□□□□□ -0.43
VAPA-201ENST00000340541 BUB1B-PAK6H3BSN5 160 aa12.38□□□□□ -0.43
VAPA-201ENST00000340541 AIPO00170 330 aa12.38□□□□□ -0.43
VAPA-201ENST00000340541 CCRL2O00421 344 aa12.38□□□□□ -0.43
VAPA-201ENST00000340541 ORC5O43913 435 aa12.38□□□□□ -0.43
VAPA-201ENST00000340541 IGHV3-7P01780 117 aa12.38□□□□□ -0.43
VAPA-201ENST00000340541 GZMHP20718 246 aa12.38□□□□□ -0.43
VAPA-201ENST00000340541 GALP22466 123 aa12.38□□□□□ -0.43
VAPA-201ENST00000340541 CHATP28329 748 aa12.38□□□□□ -0.43
VAPA-201ENST00000340541 SRSF4Q08170 494 aaKnown RBP12.38□□□□□ -0.43
VAPA-201ENST00000340541 OR9G1Q8NH87 305 aa12.38□□□□□ -0.43
VAPA-201ENST00000340541 TMEM59Q9BXS4 323 aa12.38□□□□□ -0.43
VAPA-201ENST00000340541 LPAR5Q9H1C0 372 aa12.38□□□□□ -0.43
VAPA-201ENST00000340541 PSG11Q9UQ72 335 aa12.38□□□□□ -0.43
VAPA-201ENST00000340541 UBE2QL1A1L167 161 aa12.37□□□□□ -0.43
VAPA-201ENST00000340541 LEUTXA8MZ59 168 aa12.37□□□□□ -0.43
VAPA-201ENST00000340541 C12orf77C9JDV5 145 aa12.37□□□□□ -0.43
VAPA-201ENST00000340541 J3QR06 171 aa12.37□□□□□ -0.43
VAPA-201ENST00000340541 TOR1AO14656 332 aa12.37□□□□□ -0.43
VAPA-201ENST00000340541 CA11O75493 328 aa12.37□□□□□ -0.43
VAPA-201ENST00000340541 PSMB9P28065 219 aa12.37□□□□□ -0.43
VAPA-201ENST00000340541 CLDN12P56749 244 aa12.37□□□□□ -0.43
VAPA-201ENST00000340541 LOXL3P58215 753 aa12.37□□□□□ -0.43
VAPA-201ENST00000340541 PROK1P58294 105 aa12.37□□□□□ -0.43
VAPA-201ENST00000340541 KRTAP10-3P60369 221 aa12.37□□□□□ -0.43
VAPA-201ENST00000340541 RAB11BQ15907 218 aa12.37□□□□□ -0.43
VAPA-201ENST00000340541 LTC4SQ16873 150 aa12.37□□□□□ -0.43
VAPA-201ENST00000340541 KCTD21Q4G0X4 260 aa12.37□□□□□ -0.43
VAPA-201ENST00000340541 SYT6Q5T7P8 510 aaPredicted RBP12.37□□□□□ -0.43
VAPA-201ENST00000340541 FAM53AQ6NSI3 398 aaPredicted RBP12.37□□□□□ -0.43
VAPA-201ENST00000340541 LIAT1Q6ZQX7 453 aa12.37□□□□□ -0.43
VAPA-201ENST00000340541 SLC16A12Q6ZSM3 486 aa12.37□□□□□ -0.43
VAPA-201ENST00000340541 OR2W3Q7Z3T1 314 aa12.37□□□□□ -0.43
VAPA-201ENST00000340541 OR4K15Q8NH41 348 aa12.37□□□□□ -0.43
VAPA-201ENST00000340541 UBALD1Q8TB05 177 aa12.37□□□□□ -0.43
VAPA-201ENST00000340541 ARL11Q969Q4 196 aa12.37□□□□□ -0.43
VAPA-201ENST00000340541 SULT4A1Q9BR01 284 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms