RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 LRRTM1Q86UE6 522 aa20.17■□□□□ 0.82
PMS1-220ENST00000618056 ZNF565Q8N9K5 539 aa20.17■□□□□ 0.82
PMS1-220ENST00000618056 PLPPR1Q8TBJ4 325 aa20.17■□□□□ 0.82
PMS1-220ENST00000618056 MGLLQ99685 303 aa20.17■□□□□ 0.82
PMS1-220ENST00000618056 MEIKINA0A087WXM9 373 aa20.16■□□□□ 0.82
PMS1-220ENST00000618056 PSMA1P25786 263 aaKnown RBP20.16■□□□□ 0.82
PMS1-220ENST00000618056 MAP2K4P45985 399 aa20.16■□□□□ 0.82
PMS1-220ENST00000618056 DYNC1I2Q13409 638 aaKnown RBP20.16■□□□□ 0.82
PMS1-220ENST00000618056 C17orf58Q2M2W7 97 aa20.16■□□□□ 0.82
PMS1-220ENST00000618056 HSD17B12Q53GQ0 312 aa20.16■□□□□ 0.82
PMS1-220ENST00000618056 LDLRAD2Q5SZI1 272 aa20.16■□□□□ 0.82
PMS1-220ENST00000618056 MINOS1Q5TGZ0 78 aa20.16■□□□□ 0.82
PMS1-220ENST00000618056 BEX1Q9HBH7 125 aa20.16■□□□□ 0.82
PMS1-220ENST00000618056 VCX3AQ9NNX9 186 aa20.16■□□□□ 0.82
PMS1-220ENST00000618056 GHRLQ9UBU3 117 aa20.16■□□□□ 0.82
PMS1-220ENST00000618056 MINOS1-NBL1R4GNA1 71 aa20.16■□□□□ 0.82
PMS1-220ENST00000618056 KBTBD11-OT1A0A1B0GTJ5 212 aa20.15■□□□□ 0.82
PMS1-220ENST00000618056 SRMP19623 302 aa20.15■□□□□ 0.82
PMS1-220ENST00000618056 PAX6P26367 422 aa20.15■□□□□ 0.82
PMS1-220ENST00000618056 RTN4RL2Q86UN3 420 aa20.15■□□□□ 0.82
PMS1-220ENST00000618056 DYNAPQ8N1N2 210 aa20.15■□□□□ 0.82
PMS1-220ENST00000618056 TMEM203Q969S6 136 aa20.15■□□□□ 0.82
PMS1-220ENST00000618056 LINC00574Q9H8X3 128 aa20.15■□□□□ 0.82
PMS1-220ENST00000618056 SPACA1Q9HBV2 294 aa20.15■□□□□ 0.82
PMS1-220ENST00000618056 A0A087X0M5 115 aa20.14■□□□□ 0.81
PMS1-220ENST00000618056 A0A1B0GX30 115 aa20.14■□□□□ 0.81
PMS1-220ENST00000618056 MRPS14O60783 128 aaKnown RBP20.14■□□□□ 0.81
PMS1-220ENST00000618056 CD37P11049 281 aa20.14■□□□□ 0.81
PMS1-220ENST00000618056 CD34P28906 385 aa20.14■□□□□ 0.81
PMS1-220ENST00000618056 GLP1RP43220 463 aa20.14■□□□□ 0.81
PMS1-220ENST00000618056 DHRS7BQ6IAN0 325 aaPredicted RBP20.14■□□□□ 0.81
PMS1-220ENST00000618056 SLC35E4Q6ICL7 350 aa20.14■□□□□ 0.81
PMS1-220ENST00000618056 TMEM91Q6ZNR0 172 aa20.14■□□□□ 0.81
PMS1-220ENST00000618056 OR13A1Q8NGR1 328 aa20.14■□□□□ 0.81
PMS1-220ENST00000618056 RCC2Q9P258 522 aaKnown RBP20.14■□□□□ 0.81
PMS1-220ENST00000618056 TRRAPQ9Y4A5 3859 aa20.13■□□□□ 0.81
PMS1-220ENST00000618056 FAM90A10PA6NDY2 464 aa20.13■□□□□ 0.81
PMS1-220ENST00000618056 FAM90A18PA6NE21 464 aa20.13■□□□□ 0.81
PMS1-220ENST00000618056 FAM90A16PA6NEW6 464 aa20.13■□□□□ 0.81
PMS1-220ENST00000618056 FAM90A20PA6NIJ5 464 aa20.13■□□□□ 0.81
PMS1-220ENST00000618056 FAM90A7PA6NKC0 464 aa20.13■□□□□ 0.81
PMS1-220ENST00000618056 FAM90A22PA8MWA6 464 aa20.13■□□□□ 0.81
PMS1-220ENST00000618056 FAM90A12PA8MX19 464 aa20.13■□□□□ 0.81
PMS1-220ENST00000618056 FAM90A5PA8MXJ8 464 aa20.13■□□□□ 0.81
PMS1-220ENST00000618056 FAM90A23PA8MXZ1 464 aa20.13■□□□□ 0.81
PMS1-220ENST00000618056 FAM90A15PP0C7V4 464 aa20.13■□□□□ 0.81
PMS1-220ENST00000618056 FAM90A13PP0C7W8 464 aa20.13■□□□□ 0.81
PMS1-220ENST00000618056 FAM90A14PP0C7W9 464 aa20.13■□□□□ 0.81
PMS1-220ENST00000618056 FAM90A24PP0C7X0 464 aa20.13■□□□□ 0.81
PMS1-220ENST00000618056 MGMTP16455 207 aa20.13■□□□□ 0.81
PMS1-220ENST00000618056 GDNFP39905 211 aa20.13■□□□□ 0.81
PMS1-220ENST00000618056 RPS25P62851 125 aaKnown RBP20.13■□□□□ 0.81
PMS1-220ENST00000618056 C1orf100Q5SVJ3 147 aa20.13■□□□□ 0.81
PMS1-220ENST00000618056 GLT8D1Q68CQ7 371 aa20.13■□□□□ 0.81
PMS1-220ENST00000618056 BAIAP2L2Q6UXY1 529 aa20.13■□□□□ 0.81
PMS1-220ENST00000618056 ZNF367Q7RTV3 350 aa20.13■□□□□ 0.81
PMS1-220ENST00000618056 ABHD12Q8N2K0 398 aa20.13■□□□□ 0.81
PMS1-220ENST00000618056 TMEM104Q8NE00 496 aa20.13■□□□□ 0.81
PMS1-220ENST00000618056 OR4P4Q8NGL7 312 aa20.13■□□□□ 0.81
PMS1-220ENST00000618056 PIFOQ8TCI5 191 aa20.13■□□□□ 0.81
PMS1-220ENST00000618056 ACOT13Q9NPJ3 140 aa20.13■□□□□ 0.81
PMS1-220ENST00000618056 UBBP0CG47 229 aa20.12■□□□□ 0.81
PMS1-220ENST00000618056 SSX2Q16385 188 aa20.12■□□□□ 0.81
PMS1-220ENST00000618056 ATAD3CQ5T2N8 411 aa20.12■□□□□ 0.81
PMS1-220ENST00000618056 SHISA2Q6UWI4 295 aa20.12■□□□□ 0.81
PMS1-220ENST00000618056 ZNF596Q8TC21 504 aa20.12■□□□□ 0.81
PMS1-220ENST00000618056 SLITRK2Q9H156 845 aa20.12■□□□□ 0.81
PMS1-220ENST00000618056 CALYQ9NYX4 217 aa20.12■□□□□ 0.81
PMS1-220ENST00000618056 CLPSL1A2RUU4 121 aa20.11■□□□□ 0.81
PMS1-220ENST00000618056 IGLV1-47P01700 117 aa20.11■□□□□ 0.81
PMS1-220ENST00000618056 GPR141Q7Z602 305 aa20.11■□□□□ 0.81
PMS1-220ENST00000618056 KIRREL1Q96J84 757 aa20.11■□□□□ 0.81
PMS1-220ENST00000618056 Q96M66 194 aa20.11■□□□□ 0.81
PMS1-220ENST00000618056 CST11Q9H112 138 aa20.11■□□□□ 0.81
PMS1-220ENST00000618056 BANF2Q9H503 90 aa20.11■□□□□ 0.81
PMS1-220ENST00000618056 TMEM30CPA0ZSE6 113 aa20.11■□□□□ 0.81
PMS1-220ENST00000618056 NPIPB11E5RHQ5 1161 aa20.11■□□□□ 0.81
PMS1-220ENST00000618056 CRTAPO75718 401 aaPredicted RBP20.11■□□□□ 0.81
PMS1-220ENST00000618056 TSPAN9O75954 239 aa20.11■□□□□ 0.81
PMS1-220ENST00000618056 IL1AP01583 271 aa20.11■□□□□ 0.81
PMS1-220ENST00000618056 HTR1DP28221 377 aa20.11■□□□□ 0.81
PMS1-220ENST00000618056 GABRA5P31644 462 aa20.11■□□□□ 0.81
PMS1-220ENST00000618056 DYNLT3P51808 116 aa20.11■□□□□ 0.81
PMS1-220ENST00000618056 OLFML2AQ68BL7 652 aa20.11■□□□□ 0.81
PMS1-220ENST00000618056 LIAT1Q6ZQX7 453 aa20.11■□□□□ 0.81
PMS1-220ENST00000618056 Q6ZSV7 163 aa20.11■□□□□ 0.81
PMS1-220ENST00000618056 SELENOIQ9C0D9 397 aa20.11■□□□□ 0.81
PMS1-220ENST00000618056 C16orf95Q9H693 158 aa20.11■□□□□ 0.81
PMS1-220ENST00000618056 ZNF286AQ9HBT8 521 aa20.11■□□□□ 0.81
PMS1-220ENST00000618056 RAB18Q9NP72 206 aa20.11■□□□□ 0.81
PMS1-220ENST00000618056 NBEAL1Q6ZS30 2694 aa20.11■□□□□ 0.81
PMS1-220ENST00000618056 PKD1L1Q8TDX9 2849 aa20.1■□□□□ 0.81
PMS1-220ENST00000618056 CCDC160A6NGH7 325 aa20.1■□□□□ 0.81
PMS1-220ENST00000618056 ARL6IP5O75915 188 aa20.1■□□□□ 0.81
PMS1-220ENST00000618056 EMX1Q04741 257 aaPredicted RBP20.1■□□□□ 0.81
PMS1-220ENST00000618056 RBM39Q14498 530 aaKnown RBP20.1■□□□□ 0.81
PMS1-220ENST00000618056 FAM189A2Q15884 450 aa20.1■□□□□ 0.81
PMS1-220ENST00000618056 LY6EQ16553 131 aa20.1■□□□□ 0.81
PMS1-220ENST00000618056 OR10A7Q8NGE5 316 aa20.1■□□□□ 0.81
PMS1-220ENST00000618056 LINC01006Q8NI28 216 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms