RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 FLRT3Q9NZU0 649 aa11.95□□□□□ -0.5
CX3CL1-204ENST00000565912 CBY1Q9Y3M2 126 aa11.95□□□□□ -0.5
CX3CL1-204ENST00000565912 RPL29P47914 159 aaKnown RBP11.95□□□□□ -0.5
CX3CL1-204ENST00000565912 ATG4DQ86TL0 474 aaPredicted RBP11.95□□□□□ -0.5
CX3CL1-204ENST00000565912 SMIM12Q96EX1 92 aa11.95□□□□□ -0.5
CX3CL1-204ENST00000565912 IGSF23A1L1A6 192 aa11.95□□□□□ -0.5
CX3CL1-204ENST00000565912 HMGA2P52926 109 aa11.95□□□□□ -0.5
CX3CL1-204ENST00000565912 PRSS42Q7Z5A4 293 aa11.95□□□□□ -0.5
CX3CL1-204ENST00000565912 D2HGDHQ8N465 521 aa11.95□□□□□ -0.5
CX3CL1-204ENST00000565912 OR10G8Q8NGN5 311 aa11.95□□□□□ -0.5
CX3CL1-204ENST00000565912 WDFY2Q96P53 400 aa11.95□□□□□ -0.5
CX3CL1-204ENST00000565912 LPAR3Q9UBY5 353 aa11.95□□□□□ -0.5
CX3CL1-204ENST00000565912 CROCCQ5TZA2 2017 aa11.95□□□□□ -0.5
CX3CL1-204ENST00000565912 HRKO00198 91 aa11.95□□□□□ -0.5
CX3CL1-204ENST00000565912 MMDQ15546 238 aa11.95□□□□□ -0.5
CX3CL1-204ENST00000565912 Q6ZN92 141 aa11.95□□□□□ -0.5
CX3CL1-204ENST00000565912 FAM219AQ8IW50 185 aa11.95□□□□□ -0.5
CX3CL1-204ENST00000565912 PERPQ96FX8 193 aa11.95□□□□□ -0.5
CX3CL1-204ENST00000565912 FRRS1LQ9P0K9 344 aa11.95□□□□□ -0.5
CX3CL1-204ENST00000565912 ZNF253O75346 499 aa11.94□□□□□ -0.5
CX3CL1-204ENST00000565912 FAM157CP0CG43 387 aa11.94□□□□□ -0.5
CX3CL1-204ENST00000565912 P2RY1P47900 373 aa11.94□□□□□ -0.5
CX3CL1-204ENST00000565912 RNFT1Q5M7Z0 435 aa11.94□□□□□ -0.5
CX3CL1-204ENST00000565912 TRBV23-1A0A0A0MS06 115 aa11.94□□□□□ -0.5
CX3CL1-204ENST00000565912 RGS13O14921 159 aa11.94□□□□□ -0.5
CX3CL1-204ENST00000565912 REG1BP48304 166 aa11.94□□□□□ -0.5
CX3CL1-204ENST00000565912 PSG6Q00889 435 aa11.94□□□□□ -0.5
CX3CL1-204ENST00000565912 RIGQ13278 110 aa11.94□□□□□ -0.5
CX3CL1-204ENST00000565912 ABHD1Q96SE0 405 aa11.94□□□□□ -0.5
CX3CL1-204ENST00000565912 Q9N2K0 584 aa11.94□□□□□ -0.5
CX3CL1-204ENST00000565912 PRNDQ9UKY0 176 aa11.94□□□□□ -0.5
CX3CL1-204ENST00000565912 PRF1P14222 555 aa11.94□□□□□ -0.5
CX3CL1-204ENST00000565912 CRISP2P16562 243 aa11.94□□□□□ -0.5
CX3CL1-204ENST00000565912 SIGLEC14Q08ET2 396 aa11.94□□□□□ -0.5
CX3CL1-204ENST00000565912 MYO7AQ13402 2215 aa11.94□□□□□ -0.5
CX3CL1-204ENST00000565912 CACNA1CQ13936 2221 aa11.94□□□□□ -0.5
CX3CL1-204ENST00000565912 TMSB15BA0A087X1C1 80 aa11.94□□□□□ -0.5
CX3CL1-204ENST00000565912 A0A1W2PPE3 182 aa11.94□□□□□ -0.5
CX3CL1-204ENST00000565912 CDRT15L2A8MXV6 281 aa11.94□□□□□ -0.5
CX3CL1-204ENST00000565912 LRP11Q86VZ4 500 aa11.94□□□□□ -0.5
CX3CL1-204ENST00000565912 OR2T10Q8NGZ9 312 aa11.94□□□□□ -0.5
CX3CL1-204ENST00000565912 HMGCLL1Q8TB92 370 aa11.94□□□□□ -0.5
CX3CL1-204ENST00000565912 SCMH1Q96GD3 660 aa11.94□□□□□ -0.5
CX3CL1-204ENST00000565912 J3QT63 122 aa11.94□□□□□ -0.5
CX3CL1-204ENST00000565912 NTN1O95631 604 aa11.94□□□□□ -0.5
CX3CL1-204ENST00000565912 PIGYQ3MUY2 71 aa11.94□□□□□ -0.5
CX3CL1-204ENST00000565912 COL13A1Q5TAT6 717 aaPredicted RBP11.94□□□□□ -0.5
CX3CL1-204ENST00000565912 CES1P1Q9UKY3 287 aa11.94□□□□□ -0.5
CX3CL1-204ENST00000565912 PPYP01298 95 aa11.93□□□□□ -0.5
CX3CL1-204ENST00000565912 RAG2P55895 527 aa11.93□□□□□ -0.5
CX3CL1-204ENST00000565912 MRPL54Q6P161 138 aaKnown RBP11.93□□□□□ -0.5
CX3CL1-204ENST00000565912 GPX7Q96SL4 187 aaPredicted RBP11.93□□□□□ -0.5
CX3CL1-204ENST00000565912 P2RX4Q99571 388 aa11.93□□□□□ -0.5
CX3CL1-204ENST00000565912 DLX1P56177 255 aa11.93□□□□□ -0.5
CX3CL1-204ENST00000565912 AESQ08117 197 aa11.93□□□□□ -0.5
CX3CL1-204ENST00000565912 DMKNQ6E0U4 476 aaPredicted RBP11.93□□□□□ -0.5
CX3CL1-204ENST00000565912 BHLHA9Q7RTU4 235 aa11.93□□□□□ -0.5
CX3CL1-204ENST00000565912 MRGPRFQ96AM1 343 aa11.93□□□□□ -0.5
CX3CL1-204ENST00000565912 MS4A7Q9GZW8 240 aaPredicted RBP11.93□□□□□ -0.5
CX3CL1-204ENST00000565912 WNT5AP41221 380 aa11.93□□□□□ -0.5
CX3CL1-204ENST00000565912 KIR2DL1P43626 348 aaPredicted RBP11.93□□□□□ -0.5
CX3CL1-204ENST00000565912 KIR2DL2P43627 348 aaPredicted RBP11.93□□□□□ -0.5
CX3CL1-204ENST00000565912 MPV17LQ2QL34 196 aa11.93□□□□□ -0.5
CX3CL1-204ENST00000565912 HLA-DRB5Q30154 266 aa11.93□□□□□ -0.5
CX3CL1-204ENST00000565912 DCAF10Q5QP82 559 aa11.93□□□□□ -0.5
CX3CL1-204ENST00000565912 RPS4Y2Q8TD47 263 aa11.93□□□□□ -0.5
CX3CL1-204ENST00000565912 ID1P41134 155 aa11.93□□□□□ -0.5
CX3CL1-204ENST00000565912 C1orf53Q5VUE5 145 aa11.93□□□□□ -0.5
CX3CL1-204ENST00000565912 OR1L6Q8NGR2 347 aa11.93□□□□□ -0.5
CX3CL1-204ENST00000565912 TMEM191AQ9H0A3 160 aa11.93□□□□□ -0.5
CX3CL1-204ENST00000565912 MBPP02686 304 aaPredicted RBP11.92□□□□□ -0.5
CX3CL1-204ENST00000565912 HIST1H1EP10412 219 aaKnown RBP11.92□□□□□ -0.5
CX3CL1-204ENST00000565912 ELOBQ15370 118 aa11.92□□□□□ -0.5
CX3CL1-204ENST00000565912 PIPOXQ9P0Z9 390 aa11.92□□□□□ -0.5
CX3CL1-204ENST00000565912 MFSD2BA6NFX1 497 aa11.92□□□□□ -0.5
CX3CL1-204ENST00000565912 SRSF9Q13242 221 aaKnown RBP eCLIP11.92□□□□□ -0.5
CX3CL1-204ENST00000565912 DYRK2Q92630 601 aa11.92□□□□□ -0.5
CX3CL1-204ENST00000565912 VDAC1P21796 283 aa11.92□□□□□ -0.5
CX3CL1-204ENST00000565912 GPR6P46095 362 aaPredicted RBP11.92□□□□□ -0.5
CX3CL1-204ENST00000565912 LOXL3P58215 753 aa11.92□□□□□ -0.5
CX3CL1-204ENST00000565912 INO80CQ6PI98 192 aaPredicted RBP11.92□□□□□ -0.5
CX3CL1-204ENST00000565912 MDP1Q86V88 176 aa11.92□□□□□ -0.5
CX3CL1-204ENST00000565912 OIT3Q8WWZ8 545 aa11.92□□□□□ -0.5
CX3CL1-204ENST00000565912 MAP1LC3CQ9BXW4 147 aa11.92□□□□□ -0.5
CX3CL1-204ENST00000565912 SLC25A10Q9UBX3 287 aaPredicted RBP11.92□□□□□ -0.5
CX3CL1-204ENST00000565912 PRSS50Q9UI38 385 aa11.92□□□□□ -0.5
CX3CL1-204ENST00000565912 TTC3P53804 2025 aa11.92□□□□□ -0.5
CX3CL1-204ENST00000565912 ID4P47928 161 aa11.92□□□□□ -0.5
CX3CL1-204ENST00000565912 SURF2Q15527 256 aaPredicted RBP11.92□□□□□ -0.5
CX3CL1-204ENST00000565912 C10orf35Q96D05 121 aa11.92□□□□□ -0.5
CX3CL1-204ENST00000565912 SNRNP40Q96DI7 357 aaKnown RBP11.92□□□□□ -0.5
CX3CL1-204ENST00000565912 TMEM38BQ9NVV0 291 aa11.92□□□□□ -0.5
CX3CL1-204ENST00000565912 CYB5R1Q9UHQ9 305 aa11.92□□□□□ -0.5
CX3CL1-204ENST00000565912 SYNGR1O43759 233 aa11.92□□□□□ -0.5
CX3CL1-204ENST00000565912 SRSF10O75494 262 aaKnown RBP11.92□□□□□ -0.5
CX3CL1-204ENST00000565912 FBXW9Q5XUX1 488 aa11.92□□□□□ -0.5
CX3CL1-204ENST00000565912 MRPL24Q96A35 216 aaKnown RBP11.92□□□□□ -0.5
CX3CL1-204ENST00000565912 PHYHIPLQ96FC7 376 aa11.92□□□□□ -0.5
CX3CL1-204ENST00000565912 BET1LQ9NYM9 111 aa11.92□□□□□ -0.5
CX3CL1-204ENST00000565912 TRAV20A0A0B4J274 112 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms