RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 FOXI3A8MTJ6 420 aaPredicted RBP11.82□□□□□ -0.52
DDX54-203ENST00000546869 HSPB6O14558 160 aa11.82□□□□□ -0.52
DDX54-203ENST00000546869 MT-ND4P03905 459 aa11.82□□□□□ -0.52
DDX54-203ENST00000546869 RAB6AP20340 208 aa11.82□□□□□ -0.52
DDX54-203ENST00000546869 CHATP28329 748 aa11.82□□□□□ -0.52
DDX54-203ENST00000546869 CLDN12P56749 244 aa11.82□□□□□ -0.52
DDX54-203ENST00000546869 SCAND1P57086 179 aa11.82□□□□□ -0.52
DDX54-203ENST00000546869 MIDNQ504T8 468 aa11.82□□□□□ -0.52
DDX54-203ENST00000546869 HES5Q5TA89 166 aa11.82□□□□□ -0.52
DDX54-203ENST00000546869 OR52W1Q6IF63 320 aa11.82□□□□□ -0.52
DDX54-203ENST00000546869 BRD3OSQ6XYD6 125 aa11.82□□□□□ -0.52
DDX54-203ENST00000546869 TRAPPC6BQ86SZ2 158 aa11.82□□□□□ -0.52
DDX54-203ENST00000546869 BCL6BQ8N143 479 aaPredicted RBP11.82□□□□□ -0.52
DDX54-203ENST00000546869 PIP4P2Q8N4L2 257 aa11.82□□□□□ -0.52
DDX54-203ENST00000546869 OR11H6Q8NGC7 330 aa11.82□□□□□ -0.52
DDX54-203ENST00000546869 OR10A7Q8NGE5 316 aa11.82□□□□□ -0.52
DDX54-203ENST00000546869 OR13D1Q8NGV5 346 aa11.82□□□□□ -0.52
DDX54-203ENST00000546869 NEDD4LQ96PU5 975 aa11.82□□□□□ -0.52
DDX54-203ENST00000546869 SLC6A7Q99884 636 aa11.82□□□□□ -0.52
DDX54-203ENST00000546869 FUNDC2Q9BWH2 189 aa11.82□□□□□ -0.52
DDX54-203ENST00000546869 HSF4Q9ULV5 492 aa11.82□□□□□ -0.52
DDX54-203ENST00000546869 SESN1Q9Y6P5 492 aa11.82□□□□□ -0.52
DDX54-203ENST00000546869 IGHV3OR16-10A0A075B7F0 116 aa11.81□□□□□ -0.52
DDX54-203ENST00000546869 A0A087X0M5 115 aa11.81□□□□□ -0.52
DDX54-203ENST00000546869 TMEM272A0A1B0GTI8 110 aa11.81□□□□□ -0.52
DDX54-203ENST00000546869 A0A1B0GX30 115 aa11.81□□□□□ -0.52
DDX54-203ENST00000546869 NPIPB11E5RHQ5 1161 aa11.81□□□□□ -0.52
DDX54-203ENST00000546869 NPFFO15130 113 aa11.81□□□□□ -0.52
DDX54-203ENST00000546869 ORC5O43913 435 aa11.81□□□□□ -0.52
DDX54-203ENST00000546869 CLPXO76031 633 aa11.81□□□□□ -0.52
DDX54-203ENST00000546869 TFAP2AP05549 437 aa11.81□□□□□ -0.52
DDX54-203ENST00000546869 ALDH3B2P48448 385 aa11.81□□□□□ -0.52
DDX54-203ENST00000546869 C17orf58Q2M2W7 97 aa11.81□□□□□ -0.52
DDX54-203ENST00000546869 SFXN4Q6P4A7 337 aa11.81□□□□□ -0.52
DDX54-203ENST00000546869 BRICD5Q6PL45 260 aa11.81□□□□□ -0.52
DDX54-203ENST00000546869 RBMS3Q6XE24 437 aaKnown RBP11.81□□□□□ -0.52
DDX54-203ENST00000546869 ZNF554Q86TJ5 538 aa11.81□□□□□ -0.52
DDX54-203ENST00000546869 CROCCP3Q8IVE0 287 aa11.81□□□□□ -0.52
DDX54-203ENST00000546869 OR56B1Q8NGI3 324 aa11.81□□□□□ -0.52
DDX54-203ENST00000546869 OR13A1Q8NGR1 328 aa11.81□□□□□ -0.52
DDX54-203ENST00000546869 ZFAND2BQ8WV99 257 aa11.81□□□□□ -0.52
DDX54-203ENST00000546869 C22orf15Q8WYQ4 148 aa11.81□□□□□ -0.52
DDX54-203ENST00000546869 NICN1Q9BSH3 213 aa11.81□□□□□ -0.52
DDX54-203ENST00000546869 RNF167Q9H6Y7 350 aa11.81□□□□□ -0.52
DDX54-203ENST00000546869 LIN7BQ9HAP6 207 aa11.81□□□□□ -0.52
DDX54-203ENST00000546869 ETAA1Q9NY74 926 aa11.81□□□□□ -0.52
DDX54-203ENST00000546869 A0A0A6YYD4 124 aa11.8□□□□□ -0.52
DDX54-203ENST00000546869 CLDN34H7C241 214 aa11.8□□□□□ -0.52
DDX54-203ENST00000546869 CD34P28906 385 aa11.8□□□□□ -0.52
DDX54-203ENST00000546869 BLVRBP30043 206 aaPredicted RBP11.8□□□□□ -0.52
DDX54-203ENST00000546869 Q6YL49 198 aa11.8□□□□□ -0.52
DDX54-203ENST00000546869 SLC16A12Q6ZSM3 486 aa11.8□□□□□ -0.52
DDX54-203ENST00000546869 RTN4RL2Q86UN3 420 aa11.8□□□□□ -0.52
DDX54-203ENST00000546869 ANKRD13BQ86YJ7 626 aa11.8□□□□□ -0.52
DDX54-203ENST00000546869 NEK7Q8TDX7 302 aa11.8□□□□□ -0.52
DDX54-203ENST00000546869 ZNF48Q96MX3 618 aaPredicted RBP11.8□□□□□ -0.52
DDX54-203ENST00000546869 TMEM133Q9H2Q1 129 aa11.8□□□□□ -0.52
DDX54-203ENST00000546869 RIMS4Q9H426 269 aaPredicted RBP11.8□□□□□ -0.52
DDX54-203ENST00000546869 KCNK15Q9H427 330 aa11.8□□□□□ -0.52
DDX54-203ENST00000546869 METTL21EPA6NDL7 271 aa11.79□□□□□ -0.52
DDX54-203ENST00000546869 ODF3BA8MYP8 253 aa11.79□□□□□ -0.52
DDX54-203ENST00000546869 MMP23AO75900 390 aa11.79□□□□□ -0.52
DDX54-203ENST00000546869 IL1AP01583 271 aa11.79□□□□□ -0.52
DDX54-203ENST00000546869 SLC2A2P11168 524 aaPredicted RBP11.79□□□□□ -0.52
DDX54-203ENST00000546869 CDK2P24941 298 aa11.79□□□□□ -0.52
DDX54-203ENST00000546869 DLX1P56177 255 aa11.79□□□□□ -0.52
DDX54-203ENST00000546869 TMEM50BP56557 158 aa11.79□□□□□ -0.52
DDX54-203ENST00000546869 KLRD1Q13241 179 aa11.79□□□□□ -0.52
DDX54-203ENST00000546869 DEFB112Q30KQ8 113 aa11.79□□□□□ -0.52
DDX54-203ENST00000546869 RUSC1-AS1Q66K80 236 aa11.79□□□□□ -0.52
DDX54-203ENST00000546869 ZNF626Q68DY1 528 aa11.79□□□□□ -0.52
DDX54-203ENST00000546869 TRAT1Q6PIZ9 186 aa11.79□□□□□ -0.52
DDX54-203ENST00000546869 PNKDQ8N490 385 aa11.79□□□□□ -0.52
DDX54-203ENST00000546869 TMEM86BQ8N661 226 aa11.79□□□□□ -0.52
DDX54-203ENST00000546869 SIGLECL1Q8N7X8 197 aa11.79□□□□□ -0.52
DDX54-203ENST00000546869 OR52M1Q8NGK5 317 aa11.79□□□□□ -0.52
DDX54-203ENST00000546869 SULT4A1Q9BR01 284 aa11.79□□□□□ -0.52
DDX54-203ENST00000546869 ZMAT3Q9HA38 289 aaKnown RBP11.79□□□□□ -0.52
DDX54-203ENST00000546869 RAB9BQ9NP90 201 aa11.79□□□□□ -0.52
DDX54-203ENST00000546869 MBNL3Q9NUK0 354 aaKnown RBP11.79□□□□□ -0.52
DDX54-203ENST00000546869 PLEKHJ1Q9NW61 149 aa11.79□□□□□ -0.52
DDX54-203ENST00000546869 ING3Q9NXR8 418 aa11.79□□□□□ -0.52
DDX54-203ENST00000546869 CALYQ9NYX4 217 aa11.79□□□□□ -0.52
DDX54-203ENST00000546869 TBL2Q9Y4P3 447 aaKnown RBP11.79□□□□□ -0.52
DDX54-203ENST00000546869 DSCAML1Q8TD84 2053 aa11.79□□□□□ -0.52
DDX54-203ENST00000546869 TRBV6-6A0A0A6YYG2 114 aa11.78□□□□□ -0.52
DDX54-203ENST00000546869 IGHV2-26A0A0B4J1V2 119 aa11.78□□□□□ -0.52
DDX54-203ENST00000546869 A0A0U1RQK1 487 aa11.78□□□□□ -0.52
DDX54-203ENST00000546869 MEX3AA1L020 520 aaKnown RBP11.78□□□□□ -0.52
DDX54-203ENST00000546869 UBE2QL1A1L167 161 aa11.78□□□□□ -0.52
DDX54-203ENST00000546869 SOCS1O15524 211 aa11.78□□□□□ -0.52
DDX54-203ENST00000546869 VENTXO95231 258 aa11.78□□□□□ -0.52
DDX54-203ENST00000546869 CLEC2LP0C7M8 214 aa11.78□□□□□ -0.52
DDX54-203ENST00000546869 SAA4P35542 130 aa11.78□□□□□ -0.52
DDX54-203ENST00000546869 GLP1RP43220 463 aa11.78□□□□□ -0.52
DDX54-203ENST00000546869 VEGFCP49767 419 aa11.78□□□□□ -0.52
DDX54-203ENST00000546869 TMEM30BQ3MIR4 351 aa11.78□□□□□ -0.52
DDX54-203ENST00000546869 Q3ZCU0 254 aa11.78□□□□□ -0.52
DDX54-203ENST00000546869 C6orf183Q5T699 404 aa11.78□□□□□ -0.52
DDX54-203ENST00000546869 ZNF782Q6ZMW2 699 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms