RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 GLP1RP43220 463 aa6.24□□□□□ -1.41
CLIP1-206ENST00000535290 ATXN7L3Q14CW9 347 aaPredicted RBP6.24□□□□□ -1.41
CLIP1-206ENST00000535290 C19orf54Q5BKX5 351 aa6.24□□□□□ -1.41
CLIP1-206ENST00000535290 SPIN3Q5JUX0 258 aa6.24□□□□□ -1.41
CLIP1-206ENST00000535290 LCN12Q6JVE5 192 aa6.24□□□□□ -1.41
CLIP1-206ENST00000535290 LYG2Q86SG7 212 aa6.24□□□□□ -1.41
CLIP1-206ENST00000535290 ZNF575Q86XF7 245 aa6.24□□□□□ -1.41
CLIP1-206ENST00000535290 OR9Q2Q8NGE9 314 aa6.24□□□□□ -1.41
CLIP1-206ENST00000535290 OR9G4Q8NGQ1 327 aa6.24□□□□□ -1.41
CLIP1-206ENST00000535290 CHAC2Q8WUX2 184 aa6.24□□□□□ -1.41
CLIP1-206ENST00000535290 PHLDA1Q8WV24 401 aaPredicted RBP6.24□□□□□ -1.41
CLIP1-206ENST00000535290 STON2Q8WXE9 905 aa6.24□□□□□ -1.41
CLIP1-206ENST00000535290 MBOAT4Q96T53 435 aa6.24□□□□□ -1.41
CLIP1-206ENST00000535290 BTBD10Q9BSF8 475 aa6.24□□□□□ -1.41
CLIP1-206ENST00000535290 LINC00574Q9H8X3 128 aa6.24□□□□□ -1.41
CLIP1-206ENST00000535290 PLEKHA1Q9HB21 404 aa6.24□□□□□ -1.41
CLIP1-206ENST00000535290 EXOSC4Q9NPD3 245 aaKnown RBP6.24□□□□□ -1.41
CLIP1-206ENST00000535290 ARMC1Q9NVT9 282 aa6.24□□□□□ -1.41
CLIP1-206ENST00000535290 GID8Q9NWU2 228 aa6.24□□□□□ -1.41
CLIP1-206ENST00000535290 MRM2Q9UI43 246 aaKnown RBP6.24□□□□□ -1.41
CLIP1-206ENST00000535290 OR11H12B2RN74 326 aa6.23□□□□□ -1.41
CLIP1-206ENST00000535290 NPIPB11E5RHQ5 1161 aa6.23□□□□□ -1.41
CLIP1-206ENST00000535290 NME4O00746 187 aa6.23□□□□□ -1.41
CLIP1-206ENST00000535290 ARPC1BO15143 372 aaKnown RBP6.23□□□□□ -1.41
CLIP1-206ENST00000535290 SOX14O95416 240 aa6.23□□□□□ -1.41
CLIP1-206ENST00000535290 GASTP01350 101 aa6.23□□□□□ -1.41
CLIP1-206ENST00000535290 CSN2P05814 226 aa6.23□□□□□ -1.41
CLIP1-206ENST00000535290 CSN3P07498 182 aa6.23□□□□□ -1.41
CLIP1-206ENST00000535290 ZNF3P17036 446 aa6.23□□□□□ -1.41
CLIP1-206ENST00000535290 VHLP40337 213 aa6.23□□□□□ -1.41
CLIP1-206ENST00000535290 NDPQ00604 133 aa6.23□□□□□ -1.41
CLIP1-206ENST00000535290 TNFRSF9Q07011 255 aa6.23□□□□□ -1.41
CLIP1-206ENST00000535290 SCN1BQ07699 218 aa6.23□□□□□ -1.41
CLIP1-206ENST00000535290 KLF5Q13887 457 aaPredicted RBP6.23□□□□□ -1.41
CLIP1-206ENST00000535290 ECSCRQ19T08 205 aa6.23□□□□□ -1.41
CLIP1-206ENST00000535290 SAMD4BQ5PRF9 694 aaKnown RBP6.23□□□□□ -1.41
CLIP1-206ENST00000535290 Q6P435 159 aa6.23□□□□□ -1.41
CLIP1-206ENST00000535290 RASSF6Q6ZTQ3 369 aa6.23□□□□□ -1.41
CLIP1-206ENST00000535290 Q8IYB0 196 aa6.23□□□□□ -1.41
CLIP1-206ENST00000535290 Q8N402 240 aa6.23□□□□□ -1.41
CLIP1-206ENST00000535290 YIPF7Q8N8F6 280 aa6.23□□□□□ -1.41
CLIP1-206ENST00000535290 ZNF565Q8N9K5 539 aa6.23□□□□□ -1.41
CLIP1-206ENST00000535290 OR2T33Q8NG76 320 aa6.23□□□□□ -1.41
CLIP1-206ENST00000535290 RTN4IP1Q8WWV3 396 aaPredicted RBP6.23□□□□□ -1.41
CLIP1-206ENST00000535290 RITA1Q96K30 269 aa6.23□□□□□ -1.41
CLIP1-206ENST00000535290 MS4A10Q96PG2 267 aa6.23□□□□□ -1.41
CLIP1-206ENST00000535290 SPACA5Q96QH8 159 aa6.23□□□□□ -1.41
CLIP1-206ENST00000535290 SLC25A19Q9HC21 320 aa6.23□□□□□ -1.41
CLIP1-206ENST00000535290 HMG20AQ9NP66 347 aa6.23□□□□□ -1.41
CLIP1-206ENST00000535290 CMC2Q9NRP2 79 aa6.23□□□□□ -1.41
CLIP1-206ENST00000535290 ETAA1Q9NY74 926 aa6.23□□□□□ -1.41
CLIP1-206ENST00000535290 KIF25Q9UIL4 384 aa6.23□□□□□ -1.41
CLIP1-206ENST00000535290 BAIAP2Q9UQB8 552 aa6.23□□□□□ -1.41
CLIP1-206ENST00000535290 V9GYQ6 96 aa6.23□□□□□ -1.41
CLIP1-206ENST00000535290 MEIKINA0A087WXM9 373 aa6.22□□□□□ -1.41
CLIP1-206ENST00000535290 TRAV39A0A0B4J263 110 aa6.22□□□□□ -1.41
CLIP1-206ENST00000535290 ANKRD34BA5PLL1 514 aa6.22□□□□□ -1.41
CLIP1-206ENST00000535290 PRSS29PA6NIE9 313 aa6.22□□□□□ -1.41
CLIP1-206ENST00000535290 ZNF785A8K8V0 405 aa6.22□□□□□ -1.41
CLIP1-206ENST00000535290 BBIP1A8MTZ0 92 aa6.22□□□□□ -1.41
CLIP1-206ENST00000535290 SLC33A1O00400 549 aaPredicted RBP6.22□□□□□ -1.41
CLIP1-206ENST00000535290 XRCC3O43542 346 aa6.22□□□□□ -1.41
CLIP1-206ENST00000535290 SRSF10O75494 262 aaKnown RBP6.22□□□□□ -1.41
CLIP1-206ENST00000535290 HLA-DRB1P01911 266 aa6.22□□□□□ -1.41
CLIP1-206ENST00000535290 ZNF44P15621 663 aa6.22□□□□□ -1.41
CLIP1-206ENST00000535290 RRM2P31350 389 aa6.22□□□□□ -1.41
CLIP1-206ENST00000535290 SSTR5P35346 364 aa6.22□□□□□ -1.41
CLIP1-206ENST00000535290 MECP2P51608 486 aaKnown RBP6.22□□□□□ -1.41
CLIP1-206ENST00000535290 FUT6P51993 359 aa6.22□□□□□ -1.41
CLIP1-206ENST00000535290 SYNJ2BPP57105 145 aa6.22□□□□□ -1.41
CLIP1-206ENST00000535290 ID3Q02535 119 aa6.22□□□□□ -1.41
CLIP1-206ENST00000535290 SF3A3Q12874 501 aaKnown RBP eCLIP6.22□□□□□ -1.41
CLIP1-206ENST00000535290 MMDQ15546 238 aa6.22□□□□□ -1.41
CLIP1-206ENST00000535290 METTL21CQ5VZV1 264 aa6.22□□□□□ -1.41
CLIP1-206ENST00000535290 DEGS2Q6QHC5 323 aa6.22□□□□□ -1.41
CLIP1-206ENST00000535290 Q6ZSR3 168 aa6.22□□□□□ -1.41
CLIP1-206ENST00000535290 ELMOD2Q8IZ81 293 aa6.22□□□□□ -1.41
CLIP1-206ENST00000535290 IQCF1Q8N6M8 205 aa6.22□□□□□ -1.41
CLIP1-206ENST00000535290 MRGPRDQ8TDS7 321 aa6.22□□□□□ -1.41
CLIP1-206ENST00000535290 TLCD1Q96CP7 247 aa6.22□□□□□ -1.41
CLIP1-206ENST00000535290 MROQ9BYG7 248 aa6.22□□□□□ -1.41
CLIP1-206ENST00000535290 ANKRD60Q9BZ19 345 aa6.22□□□□□ -1.41
CLIP1-206ENST00000535290 TTTY10Q9BZA0 68 aa6.22□□□□□ -1.41
CLIP1-206ENST00000535290 INTS9Q9NV88 658 aaKnown RBP6.22□□□□□ -1.41
CLIP1-206ENST00000535290 LAMP5Q9UJQ1 280 aa6.22□□□□□ -1.41
CLIP1-206ENST00000535290 GTF2A1LQ9UNN4 478 aa6.22□□□□□ -1.41
CLIP1-206ENST00000535290 FOXA2Q9Y261 457 aaPredicted RBP6.22□□□□□ -1.41
CLIP1-206ENST00000535290 MYRFQ9Y2G1 1151 aa6.22□□□□□ -1.41
CLIP1-206ENST00000535290 AP3M1Q9Y2T2 418 aa6.22□□□□□ -1.41
CLIP1-206ENST00000535290 DNAH17Q9UFH2 4485 aa6.22□□□□□ -1.41
CLIP1-206ENST00000535290 IGKV1-12A0A0C4DH73 117 aa6.21□□□□□ -1.42
CLIP1-206ENST00000535290 A0A0G2JND7 137 aa6.21□□□□□ -1.42
CLIP1-206ENST00000535290 MSGN1A6NI15 193 aa6.21□□□□□ -1.42
CLIP1-206ENST00000535290 DHRS7CA6NNS2 312 aa6.21□□□□□ -1.42
CLIP1-206ENST00000535290 HSPB6O14558 160 aa6.21□□□□□ -1.42
CLIP1-206ENST00000535290 RGS13O14921 159 aa6.21□□□□□ -1.42
CLIP1-206ENST00000535290 RTL8CO15255 209 aa6.21□□□□□ -1.42
CLIP1-206ENST00000535290 MAGEB4O15481 346 aaPredicted RBP6.21□□□□□ -1.42
CLIP1-206ENST00000535290 IGKV1D-12P01611 117 aa6.21□□□□□ -1.42
CLIP1-206ENST00000535290 SEMG1P04279 462 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms