RNA–Protein interactions for RNA: ENST00000534555.5

RPS3-220, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 387 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-220ENST00000534555 POU3F4P49335 361 aa12.45□□□□□ -0.42
RPS3-220ENST00000534555 CCR9P51686 369 aa12.45□□□□□ -0.42
RPS3-220ENST00000534555 MED21Q13503 144 aa12.45□□□□□ -0.42
RPS3-220ENST00000534555 ZNF146Q15072 292 aa12.45□□□□□ -0.42
RPS3-220ENST00000534555 C17orf58Q2M2W7 97 aa12.45□□□□□ -0.42
RPS3-220ENST00000534555 TMEM244Q5VVB8 128 aa12.45□□□□□ -0.42
RPS3-220ENST00000534555 COMMD1Q8N668 190 aa12.45□□□□□ -0.42
RPS3-220ENST00000534555 TOMM40LQ969M1 308 aa12.45□□□□□ -0.42
RPS3-220ENST00000534555 RPEQ96AT9 228 aa12.45□□□□□ -0.42
RPS3-220ENST00000534555 ISG20L2Q9H9L3 353 aaKnown RBP12.45□□□□□ -0.42
RPS3-220ENST00000534555 FRRS1LQ9P0K9 344 aa12.45□□□□□ -0.42
RPS3-220ENST00000534555 GLS2Q9UI32 602 aa12.45□□□□□ -0.42
RPS3-220ENST00000534555 GSTK1Q9Y2Q3 226 aa12.45□□□□□ -0.42
RPS3-220ENST00000534555 A0A087X0M5 115 aa12.44□□□□□ -0.42
RPS3-220ENST00000534555 TRBV2A0A0J9YWF9 115 aa12.44□□□□□ -0.42
RPS3-220ENST00000534555 A0A1B0GX30 115 aa12.44□□□□□ -0.42
RPS3-220ENST00000534555 IGHG2P01859 326 aa12.44□□□□□ -0.42
RPS3-220ENST00000534555 ISG15P05161 165 aa12.44□□□□□ -0.42
RPS3-220ENST00000534555 RPSAP08865 295 aaKnown RBP12.44□□□□□ -0.42
RPS3-220ENST00000534555 LYL1P12980 280 aa12.44□□□□□ -0.42
RPS3-220ENST00000534555 PTGFRP43088 359 aa12.44□□□□□ -0.42
RPS3-220ENST00000534555 GBX2P52951 348 aaPredicted RBP12.44□□□□□ -0.42
RPS3-220ENST00000534555 AQP4P55087 323 aa12.44□□□□□ -0.42
RPS3-220ENST00000534555 NANOS3P60323 173 aaKnown RBP12.44□□□□□ -0.42
RPS3-220ENST00000534555 RIPK1Q13546 671 aa12.44□□□□□ -0.42
RPS3-220ENST00000534555 TMPRSS11AQ6ZMR5 421 aa12.44□□□□□ -0.42
RPS3-220ENST00000534555 Q8IYB0 196 aa12.44□□□□□ -0.42
RPS3-220ENST00000534555 OR4D6Q8NGJ1 314 aa12.44□□□□□ -0.42
RPS3-220ENST00000534555 LEAP2Q969E1 77 aa12.44□□□□□ -0.42
RPS3-220ENST00000534555 RNF166Q96A37 237 aaPredicted RBP12.44□□□□□ -0.42
RPS3-220ENST00000534555 C10orf35Q96D05 121 aa12.44□□□□□ -0.42
RPS3-220ENST00000534555 TMEM80Q96HE8 168 aa12.44□□□□□ -0.42
RPS3-220ENST00000534555 CHCHD3Q9NX63 227 aaKnown RBP12.44□□□□□ -0.42
RPS3-220ENST00000534555 DIMT1Q9UNQ2 313 aaKnown RBP12.44□□□□□ -0.42
RPS3-220ENST00000534555 ZNF256Q9Y2P7 627 aaPredicted RBP12.44□□□□□ -0.42
RPS3-220ENST00000534555 EXOSC1Q9Y3B2 195 aaKnown RBP12.44□□□□□ -0.42
RPS3-220ENST00000534555 LYSTQ99698 3801 aa12.44□□□□□ -0.42
RPS3-220ENST00000534555 A0A1W2PPI3 338 aa12.43□□□□□ -0.42
RPS3-220ENST00000534555 ODAMA1E959 279 aa12.43□□□□□ -0.42
RPS3-220ENST00000534555 EFCAB10A6NFE3 127 aa12.43□□□□□ -0.42
RPS3-220ENST00000534555 SH2D1BO14796 132 aa12.43□□□□□ -0.42
RPS3-220ENST00000534555 GATBO75879 557 aaKnown RBP12.43□□□□□ -0.42
RPS3-220ENST00000534555 LY86O95711 162 aa12.43□□□□□ -0.42
RPS3-220ENST00000534555 SERPINA3P01011 423 aa12.43□□□□□ -0.42
RPS3-220ENST00000534555 LIMS3P0CW19 117 aa12.43□□□□□ -0.42
RPS3-220ENST00000534555 LIMS4P0CW20 117 aa12.43□□□□□ -0.42
RPS3-220ENST00000534555 SCN1BQ07699 218 aa12.43□□□□□ -0.42
RPS3-220ENST00000534555 ALKBH1Q13686 389 aaKnown RBP12.43□□□□□ -0.42
RPS3-220ENST00000534555 DOC2BQ14184 412 aa12.43□□□□□ -0.42
RPS3-220ENST00000534555 KIR2DS1Q14954 304 aa12.43□□□□□ -0.42
RPS3-220ENST00000534555 ZNF260Q3ZCT1 412 aa12.43□□□□□ -0.42
RPS3-220ENST00000534555 SPIN3Q5JUX0 258 aa12.43□□□□□ -0.42
RPS3-220ENST00000534555 ZFAND6Q6FIF0 208 aa12.43□□□□□ -0.42
RPS3-220ENST00000534555 TEX38Q6PEX7 206 aa12.43□□□□□ -0.42
RPS3-220ENST00000534555 FOXRED2Q8IWF2 684 aa12.43□□□□□ -0.42
RPS3-220ENST00000534555 RDH10Q8IZV5 341 aa12.43□□□□□ -0.42
RPS3-220ENST00000534555 OR8U1Q8NH10 309 aa12.43□□□□□ -0.42
RPS3-220ENST00000534555 OR9G1Q8NH87 305 aa12.43□□□□□ -0.42
RPS3-220ENST00000534555 FBLIM1Q8WUP2 373 aa12.43□□□□□ -0.42
RPS3-220ENST00000534555 COQ2Q96H96 371 aa12.43□□□□□ -0.42
RPS3-220ENST00000534555 CHST5Q9GZS9 411 aa12.43□□□□□ -0.42
RPS3-220ENST00000534555 HMG20AQ9NP66 347 aa12.43□□□□□ -0.42
RPS3-220ENST00000534555 PALMDQ9NP74 551 aa12.43□□□□□ -0.42
RPS3-220ENST00000534555 EXOSC4Q9NPD3 245 aaKnown RBP12.43□□□□□ -0.42
RPS3-220ENST00000534555 CNOT2Q9NZN8 540 aaKnown RBP12.43□□□□□ -0.42
RPS3-220ENST00000534555 SMAD5-AS1Q9Y6J3 95 aa12.43□□□□□ -0.42
RPS3-220ENST00000534555 STAB2Q8WWQ8 2551 aa12.43□□□□□ -0.42
RPS3-220ENST00000534555 IGKV1-9A0A0C4DH69 117 aa12.42□□□□□ -0.42
RPS3-220ENST00000534555 FUOMA2VDF0 154 aa12.42□□□□□ -0.42
RPS3-220ENST00000534555 J3QR06 171 aa12.42□□□□□ -0.42
RPS3-220ENST00000534555 FGF16O43320 207 aa12.42□□□□□ -0.42
RPS3-220ENST00000534555 ATP6V1G2O95670 118 aa12.42□□□□□ -0.42
RPS3-220ENST00000534555 IGKV1D-33P01593 117 aa12.42□□□□□ -0.42
RPS3-220ENST00000534555 IGKV1-33P01594 117 aa12.42□□□□□ -0.42
RPS3-220ENST00000534555 HSPA13P48723 471 aa12.42□□□□□ -0.42
RPS3-220ENST00000534555 RBP2P50120 134 aa12.42□□□□□ -0.42
RPS3-220ENST00000534555 ETV1P50549 477 aa12.42□□□□□ -0.42
RPS3-220ENST00000534555 ATP1B3P54709 279 aa12.42□□□□□ -0.42
RPS3-220ENST00000534555 PNLIPRP3Q17RR3 467 aa12.42□□□□□ -0.42
RPS3-220ENST00000534555 KRBOX4Q5JUW0 171 aa12.42□□□□□ -0.42
RPS3-220ENST00000534555 OVCH2Q7RTZ1 564 aa12.42□□□□□ -0.42
RPS3-220ENST00000534555 GGHQ92820 318 aa12.42□□□□□ -0.42
RPS3-220ENST00000534555 KIRREL1Q96J84 757 aa12.42□□□□□ -0.42
RPS3-220ENST00000534555 COMMD4Q9H0A8 199 aa12.42□□□□□ -0.42
RPS3-220ENST00000534555 PPIL3Q9H2H8 161 aaKnown RBP12.42□□□□□ -0.42
RPS3-220ENST00000534555 PLCXD1Q9NUJ7 323 aa12.42□□□□□ -0.42
RPS3-220ENST00000534555 IGKV1-12A0A0C4DH73 117 aa12.41□□□□□ -0.42
RPS3-220ENST00000534555 TMEM212A6NML5 194 aa12.41□□□□□ -0.42
RPS3-220ENST00000534555 OR4C45A6NMZ5 311 aa12.41□□□□□ -0.42
RPS3-220ENST00000534555 ZNF729A6NN14 1252 aaPredicted RBP12.41□□□□□ -0.42
RPS3-220ENST00000534555 CYB5AP00167 134 aa12.41□□□□□ -0.42
RPS3-220ENST00000534555 IGKV1D-12P01611 117 aa12.41□□□□□ -0.42
RPS3-220ENST00000534555 ZNF20P17024 532 aa12.41□□□□□ -0.42
RPS3-220ENST00000534555 CDX1P47902 265 aaPredicted RBP12.41□□□□□ -0.42
RPS3-220ENST00000534555 ST3GAL4Q11206 333 aa12.41□□□□□ -0.42
RPS3-220ENST00000534555 ATXN7L3Q14CW9 347 aaPredicted RBP12.41□□□□□ -0.42
RPS3-220ENST00000534555 CCDC58Q4VC31 144 aa12.41□□□□□ -0.42
RPS3-220ENST00000534555 CXorf66Q5JRM2 361 aaPredicted RBP12.41□□□□□ -0.42
RPS3-220ENST00000534555 BPIFB6Q8NFQ5 453 aa12.41□□□□□ -0.42
RPS3-220ENST00000534555 OR5AK2Q8NH90 309 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms