RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 SSBP3Q9BWW4 388 aaPredicted RBP8.9□□□□□ -0.98
NEDD8-204ENST00000526430 TM2D1Q9BX74 207 aa8.9□□□□□ -0.98
NEDD8-204ENST00000526430 IFT22Q9H7X7 185 aa8.9□□□□□ -0.98
NEDD8-204ENST00000526430 STEAP1Q9UHE8 339 aa8.9□□□□□ -0.98
NEDD8-204ENST00000526430 ST3GAL6Q9Y274 331 aa8.9□□□□□ -0.98
NEDD8-204ENST00000526430 KIR2DS1A0A191URI9 304 aa8.89□□□□□ -0.99
NEDD8-204ENST00000526430 SIRPB1O00241 398 aa8.89□□□□□ -0.99
NEDD8-204ENST00000526430 NDUFB3O43676 98 aa8.89□□□□□ -0.99
NEDD8-204ENST00000526430 ZNF780AO75290 641 aaPredicted RBP8.89□□□□□ -0.99
NEDD8-204ENST00000526430 BPNT1O95861 308 aa8.89□□□□□ -0.99
NEDD8-204ENST00000526430 PAHP00439 452 aa8.89□□□□□ -0.99
NEDD8-204ENST00000526430 IL1AP01583 271 aa8.89□□□□□ -0.99
NEDD8-204ENST00000526430 CGB3P0DN86 165 aa8.89□□□□□ -0.99
NEDD8-204ENST00000526430 CGB7P0DN87 165 aa8.89□□□□□ -0.99
NEDD8-204ENST00000526430 GTF2F2P13984 249 aa8.89□□□□□ -0.99
NEDD8-204ENST00000526430 NPY4RP50391 375 aa8.89□□□□□ -0.99
NEDD8-204ENST00000526430 PSMD7P51665 324 aa8.89□□□□□ -0.99
NEDD8-204ENST00000526430 DLX6P56179 175 aa8.89□□□□□ -0.99
NEDD8-204ENST00000526430 RPS27AP62979 156 aaKnown RBP8.89□□□□□ -0.99
NEDD8-204ENST00000526430 IKZF1Q13422 519 aa8.89□□□□□ -0.99
NEDD8-204ENST00000526430 BLMHQ13867 455 aa8.89□□□□□ -0.99
NEDD8-204ENST00000526430 KCNJ8Q15842 424 aa8.89□□□□□ -0.99
NEDD8-204ENST00000526430 RAB11BQ15907 218 aa8.89□□□□□ -0.99
NEDD8-204ENST00000526430 SFXN4Q6P4A7 337 aa8.89□□□□□ -0.99
NEDD8-204ENST00000526430 SLC36A1Q7Z2H8 476 aa8.89□□□□□ -0.99
NEDD8-204ENST00000526430 OR2W3Q7Z3T1 314 aa8.89□□□□□ -0.99
NEDD8-204ENST00000526430 CLVS1Q8IUQ0 354 aaPredicted RBP8.89□□□□□ -0.99
NEDD8-204ENST00000526430 PLPPR1Q8TBJ4 325 aa8.89□□□□□ -0.99
NEDD8-204ENST00000526430 FAM46BQ96A09 425 aa8.89□□□□□ -0.99
NEDD8-204ENST00000526430 MRPS24Q96EL2 167 aaKnown RBP8.89□□□□□ -0.99
NEDD8-204ENST00000526430 COQ2Q96H96 371 aa8.89□□□□□ -0.99
NEDD8-204ENST00000526430 LYSTQ99698 3801 aa8.89□□□□□ -0.99
NEDD8-204ENST00000526430 DCTN5Q9BTE1 182 aa8.89□□□□□ -0.99
NEDD8-204ENST00000526430 FAM234AQ9H0X4 552 aa8.89□□□□□ -0.99
NEDD8-204ENST00000526430 PLGRKTQ9HBL7 147 aa8.89□□□□□ -0.99
NEDD8-204ENST00000526430 C19orf12Q9NSK7 152 aa8.89□□□□□ -0.99
NEDD8-204ENST00000526430 RCC2Q9P258 522 aaKnown RBP8.89□□□□□ -0.99
NEDD8-204ENST00000526430 SLC25A10Q9UBX3 287 aaPredicted RBP8.89□□□□□ -0.99
NEDD8-204ENST00000526430 CLN8Q9UBY8 286 aa8.89□□□□□ -0.99
NEDD8-204ENST00000526430 SCOCQ9UIL1 159 aa8.89□□□□□ -0.99
NEDD8-204ENST00000526430 RPUSD1Q9UJJ7 312 aaKnown RBP8.89□□□□□ -0.99
NEDD8-204ENST00000526430 DNAH1Q9P2D7 4330 aa8.89□□□□□ -0.99
NEDD8-204ENST00000526430 IGHV2-70DA0A0C4DH43 119 aa8.88□□□□□ -0.99
NEDD8-204ENST00000526430 C3orf84H3BNL1 204 aa8.88□□□□□ -0.99
NEDD8-204ENST00000526430 K7EIL1 84 aa8.88□□□□□ -0.99
NEDD8-204ENST00000526430 SH2D1BO14796 132 aa8.88□□□□□ -0.99
NEDD8-204ENST00000526430 DEGS1O15121 323 aa8.88□□□□□ -0.99
NEDD8-204ENST00000526430 CRTAPO75718 401 aaPredicted RBP8.88□□□□□ -0.99
NEDD8-204ENST00000526430 TSPAN9O75954 239 aa8.88□□□□□ -0.99
NEDD8-204ENST00000526430 MPIG6BO95866 241 aa8.88□□□□□ -0.99
NEDD8-204ENST00000526430 UBBP0CG47 229 aa8.88□□□□□ -0.99
NEDD8-204ENST00000526430 SNRPBP14678 240 aaKnown RBP8.88□□□□□ -0.99
NEDD8-204ENST00000526430 ARSBP15848 533 aa8.88□□□□□ -0.99
NEDD8-204ENST00000526430 BMXP51813 675 aa8.88□□□□□ -0.99
NEDD8-204ENST00000526430 CAPZA1P52907 286 aa8.88□□□□□ -0.99
NEDD8-204ENST00000526430 TMBIM6P55061 237 aa8.88□□□□□ -0.99
NEDD8-204ENST00000526430 ERVFRD-1P60508 538 aa8.88□□□□□ -0.99
NEDD8-204ENST00000526430 GNB2P62879 340 aa8.88□□□□□ -0.99
NEDD8-204ENST00000526430 GPR176Q14439 515 aa8.88□□□□□ -0.99
NEDD8-204ENST00000526430 HERPUD1Q15011 391 aa8.88□□□□□ -0.99
NEDD8-204ENST00000526430 C11orf91Q3C1V1 193 aa8.88□□□□□ -0.99
NEDD8-204ENST00000526430 MOGAT2Q3SYC2 334 aa8.88□□□□□ -0.99
NEDD8-204ENST00000526430 GPR157Q5UAW9 335 aa8.88□□□□□ -0.99
NEDD8-204ENST00000526430 FOXB2Q5VYV0 432 aa8.88□□□□□ -0.99
NEDD8-204ENST00000526430 TMEM200BQ69YZ2 307 aa8.88□□□□□ -0.99
NEDD8-204ENST00000526430 Q8N7P7 452 aa8.88□□□□□ -0.99
NEDD8-204ENST00000526430 SUMF2Q8NBJ7 301 aa8.88□□□□□ -0.99
NEDD8-204ENST00000526430 KCNG3Q8TAE7 436 aa8.88□□□□□ -0.99
NEDD8-204ENST00000526430 NDNFQ8TB73 568 aa8.88□□□□□ -0.99
NEDD8-204ENST00000526430 RAB40AQ8WXH6 277 aa8.88□□□□□ -0.99
NEDD8-204ENST00000526430 SLC25A46Q96AG3 418 aa8.88□□□□□ -0.99
NEDD8-204ENST00000526430 SELENOIQ9C0D9 397 aa8.88□□□□□ -0.99
NEDD8-204ENST00000526430 CHST6Q9GZX3 395 aa8.88□□□□□ -0.99
NEDD8-204ENST00000526430 LIN7BQ9HAP6 207 aa8.88□□□□□ -0.99
NEDD8-204ENST00000526430 DAPK2Q9UIK4 370 aa8.88□□□□□ -0.99
NEDD8-204ENST00000526430 KCNK7Q9Y2U2 307 aa8.88□□□□□ -0.99
NEDD8-204ENST00000526430 FAM90A10PA6NDY2 464 aa8.87□□□□□ -0.99
NEDD8-204ENST00000526430 FAM90A18PA6NE21 464 aa8.87□□□□□ -0.99
NEDD8-204ENST00000526430 FAM90A16PA6NEW6 464 aa8.87□□□□□ -0.99
NEDD8-204ENST00000526430 FAM90A20PA6NIJ5 464 aa8.87□□□□□ -0.99
NEDD8-204ENST00000526430 FAM90A8PA6NJQ4 464 aa8.87□□□□□ -0.99
NEDD8-204ENST00000526430 FAM90A7PA6NKC0 464 aa8.87□□□□□ -0.99
NEDD8-204ENST00000526430 FAM90A22PA8MWA6 464 aa8.87□□□□□ -0.99
NEDD8-204ENST00000526430 FAM90A12PA8MX19 464 aa8.87□□□□□ -0.99
NEDD8-204ENST00000526430 FAM90A5PA8MXJ8 464 aa8.87□□□□□ -0.99
NEDD8-204ENST00000526430 FAM90A23PA8MXZ1 464 aa8.87□□□□□ -0.99
NEDD8-204ENST00000526430 H3BMQ9 156 aa8.87□□□□□ -0.99
NEDD8-204ENST00000526430 RAB27BO00194 218 aa8.87□□□□□ -0.99
NEDD8-204ENST00000526430 SOCS1O15524 211 aa8.87□□□□□ -0.99
NEDD8-204ENST00000526430 CSTBP04080 98 aaKnown RBP8.87□□□□□ -0.99
NEDD8-204ENST00000526430 FAM90A15PP0C7V4 464 aa8.87□□□□□ -0.99
NEDD8-204ENST00000526430 FAM90A13PP0C7W8 464 aa8.87□□□□□ -0.99
NEDD8-204ENST00000526430 FAM90A14PP0C7W9 464 aa8.87□□□□□ -0.99
NEDD8-204ENST00000526430 FAM90A24PP0C7X0 464 aa8.87□□□□□ -0.99
NEDD8-204ENST00000526430 MMP9P14780 707 aa8.87□□□□□ -0.99
NEDD8-204ENST00000526430 CHATP28329 748 aa8.87□□□□□ -0.99
NEDD8-204ENST00000526430 ERP29P30040 261 aaKnown RBP8.87□□□□□ -0.99
NEDD8-204ENST00000526430 GLIPR1P48060 266 aa8.87□□□□□ -0.99
NEDD8-204ENST00000526430 PAX5Q02548 391 aa8.87□□□□□ -0.99
NEDD8-204ENST00000526430 SCN1BQ07699 218 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms