RNA–Protein interactions for RNA: ENST00000517256.1

SNORA40.17-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 115 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.17-201ENST00000517256 SPTBN2O15020 2390 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 PLXNA4Q9HCM2 1894 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 SIGLEC1Q9BZZ2 1709 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 ATP10AO60312 1499 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 SCAF11Q99590 1463 aaKnown RBP-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 MAP3K19Q56UN5 1328 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 WDR19Q8NEZ3 1342 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 TEP1Q99973 2627 aaKnown RBP-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 TRBV6-8A0A0A6YYG3 113 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 TRAV1-1A0A0B4J248 108 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 TRAV8-6A0A0B4J262 113 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 IRGMA1A4Y4 181 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 PGPA6NDG6 321 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 METTL21EPA6NDL7 271 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 A6NDN8 102 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 C2orf70A6NJV1 201 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 ANKRD65E5RJM6 399 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 AP3B1O00203 1094 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 NME4O00746 187 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 TOR1AO14656 332 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 NDC80O14777 642 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 TCF21O43680 179 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 DKC1O60832 514 aaKnown RBP eCLIP-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 CLDN9O95484 217 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 TGFAP01135 160 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 MT-ND3P03897 115 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 UGT2B4P06133 528 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 OR4A8P0C604 315 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 MCF2P10911 925 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 CCL4P13236 92 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 SLC25A16P16260 332 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 PRKACAP17612 351 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 M6PRP20645 277 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 OR1E1P30953 314 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 CTBP2P56545 445 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 YBEYP58557 167 aaPredicted RBP-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 RPL10AP62906 217 aaKnown RBP-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 MRPS22P82650 360 aaKnown RBP-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 DMTNQ08495 405 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 BFSP1Q12934 665 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 PDGFRLQ15198 375 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 TOMM20Q15388 145 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 MMDQ15546 238 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 USF2Q15853 346 aaPredicted RBP-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 PDK4Q16654 411 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 MRPL51Q4U2R6 128 aaKnown RBP-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 TMEM41BQ5BJD5 291 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 TPTE2P1Q5T6R2 138 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 ERICH5Q6P6B1 374 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 SSX7Q7RTT5 188 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 CCDC50Q8IVM0 306 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 OR8H3Q8N146 312 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 OR10A6Q8NH74 314 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 ZNF675Q8TD23 568 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 MITD1Q8WV92 249 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 TWIST2Q8WVJ9 160 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 PIBF1Q8WXW3 757 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 CTNNBL1Q8WYA6 563 aaPredicted RBP-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 PTP4A1Q93096 173 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 RPEQ96AT9 228 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 MRPL48Q96GC5 212 aaKnown RBP-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 SENP8Q96LD8 212 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 ERMAPQ96PL5 475 aaPredicted RBP-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 NAPGQ99747 312 aaPredicted RBP-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 SLC29A1Q99808 456 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 C11orf70Q9BRQ4 267 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 CDCA4Q9BXL8 241 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 MRPL20Q9BYC9 149 aaKnown RBP-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 STMN4Q9H169 189 aaPredicted RBP-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 ARV1Q9H2C2 271 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 C8orf33Q9H7E9 229 aaPredicted RBP-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 HMG20BQ9P0W2 317 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 MGAT4BQ9UQ53 548 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 WASHC3Q9Y3C0 194 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 DSCAMO60469 2012 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 MIA3Q5JRA6 1907 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 CEP192Q8TEP8 1941 aa-1.03□□□□□ -2.57
SNORA40.17-201ENST00000517256 PHRF1Q9P1Y6 1649 aaKnown RBP-1.04□□□□□ -2.58
SNORA40.17-201ENST00000517256 DYNC1H1Q14204 4646 aaKnown RBP-1.04□□□□□ -2.58
SNORA40.17-201ENST00000517256 BCL9O00512 1426 aa-1.04□□□□□ -2.58
SNORA40.17-201ENST00000517256 SPTBP11277 2137 aa-1.04□□□□□ -2.58
SNORA40.17-201ENST00000517256 ESPL1Q14674 2120 aa-1.04□□□□□ -2.58
SNORA40.17-201ENST00000517256 POLR3AO14802 1390 aaPredicted RBP-1.04□□□□□ -2.58
SNORA40.17-201ENST00000517256 TRBV30A0A0K0K1B3 111 aa-1.04□□□□□ -2.58
SNORA40.17-201ENST00000517256 LOC389332A0A1B0GUA5 103 aa-1.04□□□□□ -2.58
SNORA40.17-201ENST00000517256 FAM170AA1A519 330 aa-1.04□□□□□ -2.58
SNORA40.17-201ENST00000517256 OR51F1A6NGY5 319 aa-1.04□□□□□ -2.58
SNORA40.17-201ENST00000517256 M0R3G1 203 aa-1.04□□□□□ -2.58
SNORA40.17-201ENST00000517256 BHLHE40O14503 412 aa-1.04□□□□□ -2.58
SNORA40.17-201ENST00000517256 ANGPT2O15123 496 aa-1.04□□□□□ -2.58
SNORA40.17-201ENST00000517256 NDUFS5O43920 106 aa-1.04□□□□□ -2.58
SNORA40.17-201ENST00000517256 FMO6PO60774 539 aa-1.04□□□□□ -2.58
SNORA40.17-201ENST00000517256 KINO60870 393 aaKnown RBP-1.04□□□□□ -2.58
SNORA40.17-201ENST00000517256 HYPMO75409 117 aa-1.04□□□□□ -2.58
SNORA40.17-201ENST00000517256 CLDN11O75508 207 aa-1.04□□□□□ -2.58
SNORA40.17-201ENST00000517256 DNAL4O96015 105 aa-1.04□□□□□ -2.58
SNORA40.17-201ENST00000517256 HPRT1P00492 218 aa-1.04□□□□□ -2.58
SNORA40.17-201ENST00000517256 SERPINA3P01011 423 aa-1.04□□□□□ -2.58
SNORA40.17-201ENST00000517256 IL1BP01584 269 aa-1.04□□□□□ -2.58
SNORA40.17-201ENST00000517256 APOA4P06727 396 aa-1.04□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms