RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 RAB27BO00194 218 aa11.52□□□□□ -0.57
TIMP1-205ENST00000456754 MT-ND4P03905 459 aa11.52□□□□□ -0.57
TIMP1-205ENST00000456754 HOXB4P17483 251 aaPredicted RBP11.52□□□□□ -0.57
TIMP1-205ENST00000456754 RAB6AP20340 208 aa11.52□□□□□ -0.57
TIMP1-205ENST00000456754 GATA3P23771 443 aa11.52□□□□□ -0.57
TIMP1-205ENST00000456754 ERP29P30040 261 aaKnown RBP11.52□□□□□ -0.57
TIMP1-205ENST00000456754 GLP1RP43220 463 aa11.52□□□□□ -0.57
TIMP1-205ENST00000456754 TMBIM6P55061 237 aa11.52□□□□□ -0.57
TIMP1-205ENST00000456754 MADCAM1Q13477 382 aa11.52□□□□□ -0.57
TIMP1-205ENST00000456754 C17orf58Q2M2W7 97 aa11.52□□□□□ -0.57
TIMP1-205ENST00000456754 PRAMEF5Q5TYX0 476 aa11.52□□□□□ -0.57
TIMP1-205ENST00000456754 FOXB2Q5VYV0 432 aa11.52□□□□□ -0.57
TIMP1-205ENST00000456754 ZNF497Q6ZNH5 498 aa11.52□□□□□ -0.57
TIMP1-205ENST00000456754 IZUMO1Q8IYV9 350 aa11.52□□□□□ -0.57
TIMP1-205ENST00000456754 BCL6BQ8N143 479 aaPredicted RBP11.52□□□□□ -0.57
TIMP1-205ENST00000456754 RAB2BQ8WUD1 216 aa11.52□□□□□ -0.57
TIMP1-205ENST00000456754 TNFRSF14Q92956 283 aa11.52□□□□□ -0.57
TIMP1-205ENST00000456754 LHX4Q969G2 390 aa11.52□□□□□ -0.57
TIMP1-205ENST00000456754 UPRTQ96BW1 309 aa11.52□□□□□ -0.57
TIMP1-205ENST00000456754 NEDD4LQ96PU5 975 aa11.52□□□□□ -0.57
TIMP1-205ENST00000456754 URM1Q9BTM9 101 aaKnown RBP11.52□□□□□ -0.57
TIMP1-205ENST00000456754 AK3Q9UIJ7 227 aa11.52□□□□□ -0.57
TIMP1-205ENST00000456754 NAV3Q8IVL0 2385 aa11.52□□□□□ -0.57
TIMP1-205ENST00000456754 hADV38S2A0JD32 116 aa11.51□□□□□ -0.57
TIMP1-205ENST00000456754 DPPA5A6NC42 116 aa11.51□□□□□ -0.57
TIMP1-205ENST00000456754 CCDC160A6NGH7 325 aa11.51□□□□□ -0.57
TIMP1-205ENST00000456754 RNASEK-C17orf49H0YIS7 233 aa11.51□□□□□ -0.57
TIMP1-205ENST00000456754 ZNF728P0DKX0 622 aa11.51□□□□□ -0.57
TIMP1-205ENST00000456754 GNB3P16520 340 aa11.51□□□□□ -0.57
TIMP1-205ENST00000456754 RCC1P18754 421 aaPredicted RBP11.51□□□□□ -0.57
TIMP1-205ENST00000456754 SSTR5P35346 364 aa11.51□□□□□ -0.57
TIMP1-205ENST00000456754 MEF2CQ06413 473 aaPredicted RBP11.51□□□□□ -0.57
TIMP1-205ENST00000456754 LTC4SQ16873 150 aa11.51□□□□□ -0.57
TIMP1-205ENST00000456754 SLC35E4Q6ICL7 350 aa11.51□□□□□ -0.57
TIMP1-205ENST00000456754 BRD3OSQ6XYD6 125 aa11.51□□□□□ -0.57
TIMP1-205ENST00000456754 OR10R2Q8NGX6 335 aa11.51□□□□□ -0.57
TIMP1-205ENST00000456754 RFESDQ8TAC1 157 aa11.51□□□□□ -0.57
TIMP1-205ENST00000456754 MRPL30Q8TCC3 161 aaKnown RBP11.51□□□□□ -0.57
TIMP1-205ENST00000456754 ZNF714Q96N38 554 aa11.51□□□□□ -0.57
TIMP1-205ENST00000456754 PLEKHJ1Q9NW61 149 aa11.51□□□□□ -0.57
TIMP1-205ENST00000456754 TMEM160Q9NX00 188 aa11.51□□□□□ -0.57
TIMP1-205ENST00000456754 RHBDL2Q9NX52 303 aa11.51□□□□□ -0.57
TIMP1-205ENST00000456754 KPTNQ9Y664 436 aa11.51□□□□□ -0.57
TIMP1-205ENST00000456754 LINC00312Q9Y6C7 94 aa11.51□□□□□ -0.57
TIMP1-205ENST00000456754 CUBNO60494 3623 aa11.5□□□□□ -0.57
TIMP1-205ENST00000456754 CENPVL3A0A0U1RRI6 287 aa11.5□□□□□ -0.57
TIMP1-205ENST00000456754 TMEM30CPA0ZSE6 113 aa11.5□□□□□ -0.57
TIMP1-205ENST00000456754 C17orf98A8MV24 154 aa11.5□□□□□ -0.57
TIMP1-205ENST00000456754 M0R1W7 72 aa11.5□□□□□ -0.57
TIMP1-205ENST00000456754 CRLF1O75462 422 aa11.5□□□□□ -0.57
TIMP1-205ENST00000456754 EIF4EP06730 217 aaKnown RBP11.5□□□□□ -0.57
TIMP1-205ENST00000456754 CGB3P0DN86 165 aa11.5□□□□□ -0.57
TIMP1-205ENST00000456754 CGB7P0DN87 165 aa11.5□□□□□ -0.57
TIMP1-205ENST00000456754 PTHLHP12272 177 aa11.5□□□□□ -0.57
TIMP1-205ENST00000456754 COX7A1P24310 79 aa11.5□□□□□ -0.57
TIMP1-205ENST00000456754 C11orf91Q3C1V1 193 aa11.5□□□□□ -0.57
TIMP1-205ENST00000456754 Q6ZTK2 550 aa11.5□□□□□ -0.57
TIMP1-205ENST00000456754 CMTM4Q8IZR5 234 aa11.5□□□□□ -0.57
TIMP1-205ENST00000456754 KIR3DL3Q8N743 410 aa11.5□□□□□ -0.57
TIMP1-205ENST00000456754 SAMD12Q8N8I0 201 aa11.5□□□□□ -0.57
TIMP1-205ENST00000456754 OR56B1Q8NGI3 324 aa11.5□□□□□ -0.57
TIMP1-205ENST00000456754 DYNC2LI1Q8TCX1 351 aa11.5□□□□□ -0.57
TIMP1-205ENST00000456754 RAB3CQ96E17 227 aa11.5□□□□□ -0.57
TIMP1-205ENST00000456754 BEX2Q9BXY8 128 aa11.5□□□□□ -0.57
TIMP1-205ENST00000456754 SPACA1Q9HBV2 294 aa11.5□□□□□ -0.57
TIMP1-205ENST00000456754 COMMD3Q9UBI1 195 aa11.5□□□□□ -0.57
TIMP1-205ENST00000456754 ZNF69Q9UC07 566 aa11.5□□□□□ -0.57
TIMP1-205ENST00000456754 SPATA2Q9UM82 520 aa11.5□□□□□ -0.57
TIMP1-205ENST00000456754 ZFHX3Q15911 3703 aa11.5□□□□□ -0.57
TIMP1-205ENST00000456754 SETD2Q9BYW2 2564 aaPredicted RBP11.49□□□□□ -0.57
TIMP1-205ENST00000456754 TRGV10A0A0A0MS01 117 aa11.49□□□□□ -0.57
TIMP1-205ENST00000456754 MDFIC2A0A1B0GVS7 189 aa11.49□□□□□ -0.57
TIMP1-205ENST00000456754 MFNGO00587 321 aa11.49□□□□□ -0.57
TIMP1-205ENST00000456754 HPGDSO60760 199 aa11.49□□□□□ -0.57
TIMP1-205ENST00000456754 IGHV3-7P01780 117 aa11.49□□□□□ -0.57
TIMP1-205ENST00000456754 PAX6P26367 422 aa11.49□□□□□ -0.57
TIMP1-205ENST00000456754 SRP14P37108 136 aaKnown RBP11.49□□□□□ -0.57
TIMP1-205ENST00000456754 RORCP51449 518 aa11.49□□□□□ -0.57
TIMP1-205ENST00000456754 GAPTQ8N292 157 aa11.49□□□□□ -0.57
TIMP1-205ENST00000456754 C17orf50Q8WW18 174 aa11.49□□□□□ -0.57
TIMP1-205ENST00000456754 CORO2AQ92828 525 aa11.49□□□□□ -0.57
TIMP1-205ENST00000456754 LEAP2Q969E1 77 aa11.49□□□□□ -0.57
TIMP1-205ENST00000456754 PTX4Q96A99 478 aa11.49□□□□□ -0.57
TIMP1-205ENST00000456754 SUCNR1Q9BXA5 334 aa11.49□□□□□ -0.57
TIMP1-205ENST00000456754 ABRACLQ9P1F3 81 aa11.49□□□□□ -0.57
TIMP1-205ENST00000456754 ZNRD1Q9P1U0 126 aa11.49□□□□□ -0.57
TIMP1-205ENST00000456754 UBE2J1Q9Y385 318 aaPredicted RBP11.49□□□□□ -0.57
TIMP1-205ENST00000456754 ETV7Q9Y603 341 aa11.49□□□□□ -0.57
TIMP1-205ENST00000456754 C15orf65H3BRN8 121 aa11.48□□□□□ -0.57
TIMP1-205ENST00000456754 CLPXO76031 633 aa11.48□□□□□ -0.57
TIMP1-205ENST00000456754 IGHV1-8P0DP01 117 aa11.48□□□□□ -0.57
TIMP1-205ENST00000456754 HIST1H1DP16402 221 aaKnown RBP11.48□□□□□ -0.57
TIMP1-205ENST00000456754 ZNF182P17025 639 aaPredicted RBP11.48□□□□□ -0.57
TIMP1-205ENST00000456754 PRTN3P24158 256 aa11.48□□□□□ -0.57
TIMP1-205ENST00000456754 CDK2P24941 298 aa11.48□□□□□ -0.57
TIMP1-205ENST00000456754 KCNJ3P48549 501 aa11.48□□□□□ -0.57
TIMP1-205ENST00000456754 SRSF2Q01130 221 aaKnown RBP11.48□□□□□ -0.57
TIMP1-205ENST00000456754 PAX5Q02548 391 aa11.48□□□□□ -0.57
TIMP1-205ENST00000456754 RBM39Q14498 530 aaKnown RBP11.48□□□□□ -0.57
TIMP1-205ENST00000456754 CHRFAM7AQ494W8 412 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms