RNA–Protein interactions for RNA: ENST00000390485.1

TRAJ53-201, Transcript of T cell receptor alpha joining 53, humanhuman

APPRIS P1 BASIC

Gene TRAJ53, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ53-201ENST00000390485 LOC105371045A0A1W2PR82 267 aa-2.32□□□□□ -2.78
TRAJ53-201ENST00000390485 PRRG1O14668 218 aa-2.32□□□□□ -2.78
TRAJ53-201ENST00000390485 CCL25O15444 150 aa-2.32□□□□□ -2.78
TRAJ53-201ENST00000390485 TCF21O43680 179 aa-2.32□□□□□ -2.78
TRAJ53-201ENST00000390485 SSX5O60225 188 aa-2.32□□□□□ -2.78
TRAJ53-201ENST00000390485 SLC16A7O60669 478 aa-2.32□□□□□ -2.78
TRAJ53-201ENST00000390485 DKC1O60832 514 aaKnown RBP eCLIP-2.32□□□□□ -2.78
TRAJ53-201ENST00000390485 TBCAO75347 108 aaKnown RBP-2.32□□□□□ -2.78
TRAJ53-201ENST00000390485 SHBGP04278 402 aa-2.32□□□□□ -2.78
TRAJ53-201ENST00000390485 SERPINE2P07093 398 aa-2.32□□□□□ -2.78
TRAJ53-201ENST00000390485 UCHL1P09936 223 aa-2.32□□□□□ -2.78
TRAJ53-201ENST00000390485 XCL1P47992 114 aa-2.32□□□□□ -2.78
TRAJ53-201ENST00000390485 UBE2IP63279 158 aaKnown RBP-2.32□□□□□ -2.78
TRAJ53-201ENST00000390485 C4orf26Q17RF5 130 aa-2.32□□□□□ -2.78
TRAJ53-201ENST00000390485 MPV17LQ2QL34 196 aa-2.32□□□□□ -2.78
TRAJ53-201ENST00000390485 TPTE2P1Q5T6R2 138 aa-2.32□□□□□ -2.78
TRAJ53-201ENST00000390485 LINC00596Q86U02 117 aa-2.32□□□□□ -2.78
TRAJ53-201ENST00000390485 MARCH3Q86UD3 253 aa-2.32□□□□□ -2.78
TRAJ53-201ENST00000390485 OR4F6Q8NGB9 312 aa-2.32□□□□□ -2.78
TRAJ53-201ENST00000390485 OR56A4Q8NGH8 313 aa-2.32□□□□□ -2.78
TRAJ53-201ENST00000390485 OR5B3Q8NH48 314 aa-2.32□□□□□ -2.78
TRAJ53-201ENST00000390485 UBA3Q8TBC4 463 aa-2.32□□□□□ -2.78
TRAJ53-201ENST00000390485 ITFG2Q969R8 447 aa-2.32□□□□□ -2.78
TRAJ53-201ENST00000390485 YPEL4Q96NS1 127 aa-2.32□□□□□ -2.78
TRAJ53-201ENST00000390485 PSKH2Q96QS6 385 aa-2.32□□□□□ -2.78
TRAJ53-201ENST00000390485 MND1Q9BWT6 205 aa-2.32□□□□□ -2.78
TRAJ53-201ENST00000390485 STMN4Q9H169 189 aaPredicted RBP-2.32□□□□□ -2.78
TRAJ53-201ENST00000390485 PLEKHA1Q9HB21 404 aa-2.32□□□□□ -2.78
TRAJ53-201ENST00000390485 AP3M1Q9Y2T2 418 aa-2.32□□□□□ -2.78
TRAJ53-201ENST00000390485 BCORL1Q5H9F3 1711 aa-2.32□□□□□ -2.78
TRAJ53-201ENST00000390485 SCN10AQ9Y5Y9 1956 aa-2.32□□□□□ -2.78
TRAJ53-201ENST00000390485 WDR87Q6ZQQ6 2873 aa-2.33□□□□□ -2.78
TRAJ53-201ENST00000390485 HEATR5AQ86XA9 2040 aa-2.33□□□□□ -2.78
TRAJ53-201ENST00000390485 IGHV1-18A0A0C4DH31 117 aa-2.33□□□□□ -2.78
TRAJ53-201ENST00000390485 A0A0D9SEW6 157 aa-2.33□□□□□ -2.78
TRAJ53-201ENST00000390485 GABRPO00591 440 aa-2.33□□□□□ -2.78
TRAJ53-201ENST00000390485 TOR1AO14656 332 aa-2.33□□□□□ -2.78
TRAJ53-201ENST00000390485 PSTPIP1O43586 416 aa-2.33□□□□□ -2.78
TRAJ53-201ENST00000390485 COX7A2P2O60397 106 aa-2.33□□□□□ -2.78
TRAJ53-201ENST00000390485 SHOX2O60902 331 aaPredicted RBP-2.33□□□□□ -2.78
TRAJ53-201ENST00000390485 APOA4P06727 396 aa-2.33□□□□□ -2.78
TRAJ53-201ENST00000390485 BPGMP07738 259 aa-2.33□□□□□ -2.78
TRAJ53-201ENST00000390485 SLC25A16P16260 332 aa-2.33□□□□□ -2.78
TRAJ53-201ENST00000390485 CSNK2A2P19784 350 aaPredicted RBP-2.33□□□□□ -2.78
TRAJ53-201ENST00000390485 CD24P25063 80 aa-2.33□□□□□ -2.78
TRAJ53-201ENST00000390485 S100A2P29034 98 aa-2.33□□□□□ -2.78
TRAJ53-201ENST00000390485 ETV1P50549 477 aa-2.33□□□□□ -2.78
TRAJ53-201ENST00000390485 CCNHP51946 323 aaPredicted RBP-2.33□□□□□ -2.78
TRAJ53-201ENST00000390485 GABRA6Q16445 453 aa-2.33□□□□□ -2.78
TRAJ53-201ENST00000390485 IMMTQ16891 758 aaKnown RBP-2.33□□□□□ -2.78
TRAJ53-201ENST00000390485 SPRNQ5BIV9 151 aa-2.33□□□□□ -2.78
TRAJ53-201ENST00000390485 CFAP161Q6P656 301 aa-2.33□□□□□ -2.78
TRAJ53-201ENST00000390485 DAW1Q8N136 415 aa-2.33□□□□□ -2.78
TRAJ53-201ENST00000390485 C4orf36Q96KX1 117 aa-2.33□□□□□ -2.78
TRAJ53-201ENST00000390485 MGLLQ99685 303 aa-2.33□□□□□ -2.78
TRAJ53-201ENST00000390485 C1QTNF6Q9BXI9 259 aa-2.33□□□□□ -2.78
TRAJ53-201ENST00000390485 IMUPQ9GZP8 106 aa-2.33□□□□□ -2.78
TRAJ53-201ENST00000390485 EIF5A2Q9GZV4 153 aaKnown RBP-2.33□□□□□ -2.78
TRAJ53-201ENST00000390485 ASB7Q9H672 318 aa-2.33□□□□□ -2.78
TRAJ53-201ENST00000390485 RAB18Q9NP72 206 aa-2.33□□□□□ -2.78
TRAJ53-201ENST00000390485 FGF20Q9NP95 211 aaPredicted RBP-2.33□□□□□ -2.78
TRAJ53-201ENST00000390485 FLVCR2Q9UPI3 526 aa-2.33□□□□□ -2.78
TRAJ53-201ENST00000390485 CHMP2BQ9UQN3 213 aa-2.33□□□□□ -2.78
TRAJ53-201ENST00000390485 PIGLQ9Y2B2 252 aa-2.33□□□□□ -2.78
TRAJ53-201ENST00000390485 ATRNO75882 1429 aa-2.34□□□□□ -2.78
TRAJ53-201ENST00000390485 PLECQ15149 4684 aaKnown RBP-2.34□□□□□ -2.78
TRAJ53-201ENST00000390485 LAMC1P11047 1609 aa-2.34□□□□□ -2.78
TRAJ53-201ENST00000390485 SLC5A10A0PJK1 596 aa-2.34□□□□□ -2.78
TRAJ53-201ENST00000390485 LINC01619G3V211 115 aa-2.34□□□□□ -2.78
TRAJ53-201ENST00000390485 HSPA5P11021 654 aaKnown RBP-2.34□□□□□ -2.78
TRAJ53-201ENST00000390485 SFNP31947 248 aa-2.34□□□□□ -2.78
TRAJ53-201ENST00000390485 FABP6P51161 128 aa-2.34□□□□□ -2.78
TRAJ53-201ENST00000390485 RPL10AP62906 217 aaKnown RBP-2.34□□□□□ -2.78
TRAJ53-201ENST00000390485 USH1GQ495M9 461 aa-2.34□□□□□ -2.78
TRAJ53-201ENST00000390485 MRPL51Q4U2R6 128 aaKnown RBP-2.34□□□□□ -2.78
TRAJ53-201ENST00000390485 BLOC1S2Q6QNY1 142 aa-2.34□□□□□ -2.78
TRAJ53-201ENST00000390485 RASL11AQ6T310 242 aa-2.34□□□□□ -2.78
TRAJ53-201ENST00000390485 OR10AC1Q8NH08 325 aa-2.34□□□□□ -2.78
TRAJ53-201ENST00000390485 FMO2Q99518 471 aa-2.34□□□□□ -2.78
TRAJ53-201ENST00000390485 MIEN1Q9BRT3 115 aa-2.34□□□□□ -2.78
TRAJ53-201ENST00000390485 C11orf1Q9H5F2 150 aa-2.34□□□□□ -2.78
TRAJ53-201ENST00000390485 PEX16Q9Y5Y5 336 aa-2.34□□□□□ -2.78
TRAJ53-201ENST00000390485 ABCB11O95342 1321 aa-2.35□□□□□ -2.79
TRAJ53-201ENST00000390485 TRBV30A0A0K0K1B3 111 aa-2.35□□□□□ -2.79
TRAJ53-201ENST00000390485 SLC9B1P1A6NJY1 282 aa-2.35□□□□□ -2.79
TRAJ53-201ENST00000390485 OR5K4A6NMS3 321 aa-2.35□□□□□ -2.79
TRAJ53-201ENST00000390485 GOLGA8SH3BPF8 625 aa-2.35□□□□□ -2.79
TRAJ53-201ENST00000390485 BHLHE40O14503 412 aa-2.35□□□□□ -2.79
TRAJ53-201ENST00000390485 CHADO15335 359 aa-2.35□□□□□ -2.79
TRAJ53-201ENST00000390485 RHOCP08134 193 aa-2.35□□□□□ -2.79
TRAJ53-201ENST00000390485 UBBP0CG47 229 aa-2.35□□□□□ -2.79
TRAJ53-201ENST00000390485 PRKACAP17612 351 aa-2.35□□□□□ -2.79
TRAJ53-201ENST00000390485 TNNI3P19429 210 aa-2.35□□□□□ -2.79
TRAJ53-201ENST00000390485 TSPOP30536 169 aa-2.35□□□□□ -2.79
TRAJ53-201ENST00000390485 IFNA8P32881 189 aa-2.35□□□□□ -2.79
TRAJ53-201ENST00000390485 GPR1P46091 355 aa-2.35□□□□□ -2.79
TRAJ53-201ENST00000390485 CNBPP62633 177 aaKnown RBP-2.35□□□□□ -2.79
TRAJ53-201ENST00000390485 ATP6AP1LQ52LC2 224 aa-2.35□□□□□ -2.79
TRAJ53-201ENST00000390485 ACTBL2Q562R1 376 aa-2.35□□□□□ -2.79
TRAJ53-201ENST00000390485 C11orf88Q6PI97 169 aa-2.35□□□□□ -2.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms