RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 OR13C7P0DN81 318 aa12.55□□□□□ -0.4
TRAFD1-201ENST00000257604 PTGER4P35408 488 aa12.55□□□□□ -0.4
TRAFD1-201ENST00000257604 PIGPP57054 158 aa12.55□□□□□ -0.4
TRAFD1-201ENST00000257604 SUPT4H1P63272 117 aaKnown RBP12.55□□□□□ -0.4
TRAFD1-201ENST00000257604 SIRPB1O00241 398 aa12.55□□□□□ -0.4
TRAFD1-201ENST00000257604 DIRAS3O95661 229 aa12.55□□□□□ -0.4
TRAFD1-201ENST00000257604 CD37P11049 281 aa12.55□□□□□ -0.4
TRAFD1-201ENST00000257604 EIF2S3LQ2VIR3 472 aaKnown RBP12.55□□□□□ -0.4
TRAFD1-201ENST00000257604 PIP4P1Q86T03 277 aa12.55□□□□□ -0.4
TRAFD1-201ENST00000257604 RPRMLQ8N4K4 120 aa12.55□□□□□ -0.4
TRAFD1-201ENST00000257604 HPSE2Q8WWQ2 592 aa12.55□□□□□ -0.4
TRAFD1-201ENST00000257604 EXTL1Q92935 676 aa12.55□□□□□ -0.4
TRAFD1-201ENST00000257604 RTBDNQ9BSG5 229 aaPredicted RBP12.55□□□□□ -0.4
TRAFD1-201ENST00000257604 NMES1Q9C002 83 aa12.55□□□□□ -0.4
TRAFD1-201ENST00000257604 FGF23Q9GZV9 251 aaPredicted RBP12.55□□□□□ -0.4
TRAFD1-201ENST00000257604 OBP2BQ9NPH6 170 aa12.55□□□□□ -0.4
TRAFD1-201ENST00000257604 GPR132Q9UNW8 380 aa12.55□□□□□ -0.4
TRAFD1-201ENST00000257604 FBXO7Q9Y3I1 522 aa12.55□□□□□ -0.4
TRAFD1-201ENST00000257604 RBM7Q9Y580 266 aaKnown RBP12.55□□□□□ -0.4
TRAFD1-201ENST00000257604 COL12A1Q99715 3063 aa12.55□□□□□ -0.4
TRAFD1-201ENST00000257604 IGKV3D-15A0A087WSY6 115 aa12.55□□□□□ -0.4
TRAFD1-201ENST00000257604 CEBPDP49716 269 aaPredicted RBP12.55□□□□□ -0.4
TRAFD1-201ENST00000257604 MKXQ8IYA7 352 aa12.55□□□□□ -0.4
TRAFD1-201ENST00000257604 SSC4DQ8WTU2 575 aa12.55□□□□□ -0.4
TRAFD1-201ENST00000257604 NTNG2Q96CW9 530 aa12.55□□□□□ -0.4
TRAFD1-201ENST00000257604 OPN3Q9H1Y3 402 aaPredicted RBP12.55□□□□□ -0.4
TRAFD1-201ENST00000257604 GSN-AS1Q9NRJ2 163 aa12.55□□□□□ -0.4
TRAFD1-201ENST00000257604 MTCH1Q9NZJ7 389 aa12.55□□□□□ -0.4
TRAFD1-201ENST00000257604 MIOXQ9UGB7 285 aa12.55□□□□□ -0.4
TRAFD1-201ENST00000257604 DUSP13Q9UII6 198 aa12.55□□□□□ -0.4
TRAFD1-201ENST00000257604 A0A1W2PPE2 198 aa12.54□□□□□ -0.4
TRAFD1-201ENST00000257604 C1orf196B1AJZ1 125 aa12.54□□□□□ -0.4
TRAFD1-201ENST00000257604 KALRNO60229 2985 aa12.54□□□□□ -0.4
TRAFD1-201ENST00000257604 FCGR3AP08637 254 aa12.54□□□□□ -0.4
TRAFD1-201ENST00000257604 FAM189A2Q15884 450 aa12.54□□□□□ -0.4
TRAFD1-201ENST00000257604 PNLIPRP3Q17RR3 467 aa12.54□□□□□ -0.4
TRAFD1-201ENST00000257604 PRSS54Q6PEW0 395 aa12.54□□□□□ -0.4
TRAFD1-201ENST00000257604 FAM89BQ8N5H3 189 aa12.54□□□□□ -0.4
TRAFD1-201ENST00000257604 OR1J1Q8NGS3 322 aa12.54□□□□□ -0.4
TRAFD1-201ENST00000257604 PLPPR2Q96GM1 343 aa12.54□□□□□ -0.4
TRAFD1-201ENST00000257604 POM121L2Q96KW2 1035 aa12.54□□□□□ -0.4
TRAFD1-201ENST00000257604 OCSTAMPQ9BR26 566 aa12.54□□□□□ -0.4
TRAFD1-201ENST00000257604 C1QTNF5Q9BXJ0 243 aa12.54□□□□□ -0.4
TRAFD1-201ENST00000257604 TINAGQ9UJW2 476 aa12.54□□□□□ -0.4
TRAFD1-201ENST00000257604 MRPS18CQ9Y3D5 142 aaKnown RBP12.54□□□□□ -0.4
TRAFD1-201ENST00000257604 URGCP-MRPS24S4R325 110 aa12.54□□□□□ -0.4
TRAFD1-201ENST00000257604 CDIPTO14735 213 aa12.54□□□□□ -0.4
TRAFD1-201ENST00000257604 MSTNO14793 375 aa12.54□□□□□ -0.4
TRAFD1-201ENST00000257604 ZNF826PQ6ZT77 177 aa12.54□□□□□ -0.4
TRAFD1-201ENST00000257604 ARRDC1Q8N5I2 433 aa12.54□□□□□ -0.4
TRAFD1-201ENST00000257604 C9orf106Q8NAJ2 232 aa12.54□□□□□ -0.4
TRAFD1-201ENST00000257604 HSD17B11Q8NBQ5 300 aa12.54□□□□□ -0.4
TRAFD1-201ENST00000257604 TMEM45BQ96B21 275 aa12.54□□□□□ -0.4
TRAFD1-201ENST00000257604 MSL2Q9HCI7 577 aa12.54□□□□□ -0.4
TRAFD1-201ENST00000257604 TM4SF5O14894 197 aa12.53□□□□□ -0.4
TRAFD1-201ENST00000257604 SFT2D2O95562 160 aa12.53□□□□□ -0.4
TRAFD1-201ENST00000257604 SCTP09683 121 aa12.53□□□□□ -0.4
TRAFD1-201ENST00000257604 IGHV1-2P23083 117 aa12.53□□□□□ -0.4
TRAFD1-201ENST00000257604 ARR3P36575 388 aa12.53□□□□□ -0.4
TRAFD1-201ENST00000257604 HERV-K104P61576 105 aa12.53□□□□□ -0.4
TRAFD1-201ENST00000257604 FOXC1Q12948 553 aa12.53□□□□□ -0.4
TRAFD1-201ENST00000257604 IAH1Q2TAA2 248 aaPredicted RBP12.53□□□□□ -0.4
TRAFD1-201ENST00000257604 IL34Q6ZMJ4 242 aa12.53□□□□□ -0.4
TRAFD1-201ENST00000257604 OR1K1Q8NGR3 316 aa12.53□□□□□ -0.4
TRAFD1-201ENST00000257604 KIRREL1Q96J84 757 aa12.53□□□□□ -0.4
TRAFD1-201ENST00000257604 SLC5A7Q9GZV3 580 aa12.53□□□□□ -0.4
TRAFD1-201ENST00000257604 SPACA1Q9HBV2 294 aa12.53□□□□□ -0.4
TRAFD1-201ENST00000257604 HSD17B6O14756 317 aa12.53□□□□□ -0.4
TRAFD1-201ENST00000257604 PRH1P02810 166 aa12.53□□□□□ -0.4
TRAFD1-201ENST00000257604 ZNF728P0DKX0 622 aa12.53□□□□□ -0.4
TRAFD1-201ENST00000257604 PTAFRP25105 342 aa12.53□□□□□ -0.4
TRAFD1-201ENST00000257604 CHATP28329 748 aa12.53□□□□□ -0.4
TRAFD1-201ENST00000257604 CYCSP99999 105 aaKnown RBP12.53□□□□□ -0.4
TRAFD1-201ENST00000257604 CDPF1Q6NVV7 123 aa12.53□□□□□ -0.4
TRAFD1-201ENST00000257604 SGPP2Q8IWX5 399 aa12.53□□□□□ -0.4
TRAFD1-201ENST00000257604 HIST1H2BAQ96A08 127 aa12.53□□□□□ -0.4
TRAFD1-201ENST00000257604 TAAR6Q96RI8 345 aa12.53□□□□□ -0.4
TRAFD1-201ENST00000257604 REPIN1Q9BWE0 567 aaKnown RBP12.53□□□□□ -0.4
TRAFD1-201ENST00000257604 MED13LQ71F56 2210 aa12.53□□□□□ -0.4
TRAFD1-201ENST00000257604 CDRT15L2A8MXV6 281 aa12.53□□□□□ -0.4
TRAFD1-201ENST00000257604 H0YL77 283 aa12.53□□□□□ -0.4
TRAFD1-201ENST00000257604 ZNF16P17020 682 aaPredicted RBP12.53□□□□□ -0.4
TRAFD1-201ENST00000257604 RBM11P57052 281 aaKnown RBP12.53□□□□□ -0.4
TRAFD1-201ENST00000257604 NAAAQ02083 359 aa12.53□□□□□ -0.4
TRAFD1-201ENST00000257604 OR8B8Q15620 311 aa12.53□□□□□ -0.4
TRAFD1-201ENST00000257604 NSUN5P2Q63ZY6 315 aa12.53□□□□□ -0.4
TRAFD1-201ENST00000257604 PRSS33Q8NF86 280 aa12.53□□□□□ -0.4
TRAFD1-201ENST00000257604 SMCO4Q9NRQ5 59 aa12.53□□□□□ -0.4
TRAFD1-201ENST00000257604 MMP24Q9Y5R2 645 aa12.53□□□□□ -0.4
TRAFD1-201ENST00000257604 TRBV6-7A0A0A0MS04 114 aa12.52□□□□□ -0.41
TRAFD1-201ENST00000257604 TRAV17A0A0B4J275 112 aa12.52□□□□□ -0.41
TRAFD1-201ENST00000257604 PDCD6O75340 191 aa12.52□□□□□ -0.41
TRAFD1-201ENST00000257604 IFNA4P05014 189 aa12.52□□□□□ -0.41
TRAFD1-201ENST00000257604 FUT3P21217 361 aa12.52□□□□□ -0.41
TRAFD1-201ENST00000257604 TGFBR3Q03167 851 aa12.52□□□□□ -0.41
TRAFD1-201ENST00000257604 AWAT1Q58HT5 328 aa12.52□□□□□ -0.41
TRAFD1-201ENST00000257604 FAHD2BQ6P2I3 314 aaPredicted RBP12.52□□□□□ -0.41
TRAFD1-201ENST00000257604 FAHD2AQ96GK7 314 aa12.52□□□□□ -0.41
TRAFD1-201ENST00000257604 PUS1Q9Y606 427 aaKnown RBP eCLIP12.52□□□□□ -0.41
TRAFD1-201ENST00000257604 PHF1O43189 567 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms