RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 RAB27BO00194 218 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 GEMIN2O14893 280 aaKnown RBP3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 SMAD7O15105 426 aaKnown RBP3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 ADAM20O43506 726 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 NDUFA2O43678 99 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 AIREO43918 545 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 NXPH2O95156 264 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 HTR3BO95264 441 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 OR2H2O95918 312 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 HAND1O96004 215 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 CYB5AP00167 134 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 TK1P04183 234 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 FAM90A15PP0C7V4 464 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 FAM90A13PP0C7W8 464 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 FAM90A14PP0C7W9 464 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 FAM90A24PP0C7X0 464 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 TMEM225BP0DP42 221 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 IRF2P14316 349 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 MGMTP16455 207 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 PRKACAP17612 351 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 RAB3BP20337 219 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 CHATP28329 748 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 HTR2CP28335 458 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 DUSP1P28562 367 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 GZMKP49863 264 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 DLX1P56177 255 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 CLDN12P56749 244 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 GMFBP60983 142 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 PPP3R1P63098 170 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 IL13RA1P78552 427 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 LCN2P80188 198 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 BLMHQ13867 455 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 ZNF273Q14593 569 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 SPCS2Q15005 226 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 PDCD1Q15116 288 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 P2RY14Q15391 338 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 MICBQ29980 383 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 MPV17LQ2QL34 196 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 CR1LQ2VPA4 569 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 SMIM21Q3B7S5 101 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 MOGAT2Q3SYC2 334 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 PLAC9Q5JTB6 97 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 LDLRAD2Q5SZI1 272 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 RSBN1Q5VWQ0 802 aaPredicted RBP3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 SFXN4Q6P4A7 337 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 ZNF880Q6PDB4 577 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 GLIPR1L1Q6UWM5 242 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 OR2W3Q7Z3T1 314 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 SATL1Q86VE3 508 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 TPRA1Q86W33 373 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 Q8IYB0 196 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 OR8H2Q8N162 312 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 OSR2Q8N2R0 312 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 ZNF561Q8N587 486 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 JAGN1Q8N5M9 183 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 BOLLQ8N9W6 283 aaKnown RBP3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 OR5H6Q8NGV6 325 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 NDNFQ8TB73 568 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 DYNC2LI1Q8TCX1 351 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 DYRK2Q92630 601 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 EMG1Q92979 244 aaKnown RBP3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 TMEM186Q96B77 213 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 UPRTQ96BW1 309 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 RAB39BQ96DA2 213 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 TIMD4Q96H15 378 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 SNX22Q96L94 193 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 FAM234AQ9H0X4 552 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 NCOR1P1Q9H4R4 102 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 BANF2Q9H503 90 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 LINC00574Q9H8X3 128 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 UNKLQ9H9P5 680 aaKnown RBP3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 TCF7L1Q9HCS4 588 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 GHRLQ9UBU3 117 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 MIOXQ9UGB7 285 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 OR5V1Q9UGF6 321 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 RPUSD1Q9UJJ7 312 aaKnown RBP3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 V9GY05 133 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 JMJD1CQ15652 2540 aa3.09□□□□□ -1.91
SMARCE1-215ENST00000578995 TRBV23-1A0A0A0MS06 115 aa3.09□□□□□ -1.91
SMARCE1-215ENST00000578995 LOC100506127A0A0U1RQW1 187 aa3.09□□□□□ -1.91
SMARCE1-215ENST00000578995 NKX6-3A6NJ46 265 aa3.09□□□□□ -1.91
SMARCE1-215ENST00000578995 C17orf98A8MV24 154 aa3.09□□□□□ -1.91
SMARCE1-215ENST00000578995 NPIPB11E5RHQ5 1161 aa3.09□□□□□ -1.91
SMARCE1-215ENST00000578995 RNASEK-C17orf49H0YIS7 233 aa3.09□□□□□ -1.91
SMARCE1-215ENST00000578995 H3BMQ9 156 aa3.09□□□□□ -1.91
SMARCE1-215ENST00000578995 C15orf65H3BRN8 121 aa3.09□□□□□ -1.91
SMARCE1-215ENST00000578995 SIRPB1O00241 398 aa3.09□□□□□ -1.91
SMARCE1-215ENST00000578995 MFNGO00587 321 aa3.09□□□□□ -1.91
SMARCE1-215ENST00000578995 MGST3O14880 152 aa3.09□□□□□ -1.91
SMARCE1-215ENST00000578995 SOCS1O15524 211 aa3.09□□□□□ -1.91
SMARCE1-215ENST00000578995 FOXH1O75593 365 aa3.09□□□□□ -1.91
SMARCE1-215ENST00000578995 MMP23AO75900 390 aa3.09□□□□□ -1.91
SMARCE1-215ENST00000578995 NAPSAO96009 420 aa3.09□□□□□ -1.91
SMARCE1-215ENST00000578995 PAHP00439 452 aa3.09□□□□□ -1.91
SMARCE1-215ENST00000578995 IL1AP01583 271 aa3.09□□□□□ -1.91
SMARCE1-215ENST00000578995 CHRM2P08172 466 aa3.09□□□□□ -1.91
SMARCE1-215ENST00000578995 UBBP0CG47 229 aa3.09□□□□□ -1.91
SMARCE1-215ENST00000578995 PPIAL4GP0DN37 164 aa3.09□□□□□ -1.91
SMARCE1-215ENST00000578995 IGHV4-38-2P0DP08 117 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms