RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 SCGB2A2Q13296 93 aa7.53□□□□□ -1.2
CHD9-219ENST00000569225 ATXN7L3Q14CW9 347 aaPredicted RBP7.53□□□□□ -1.2
CHD9-219ENST00000569225 KRBOX4Q5JUW0 171 aa7.53□□□□□ -1.2
CHD9-219ENST00000569225 NKAPLQ5M9Q1 402 aa7.53□□□□□ -1.2
CHD9-219ENST00000569225 FAM120AOSQ5T036 256 aa7.53□□□□□ -1.2
CHD9-219ENST00000569225 C1orf122Q6ZSJ8 110 aa7.53□□□□□ -1.2
CHD9-219ENST00000569225 Q71RC1 249 aaPredicted RBP7.53□□□□□ -1.2
CHD9-219ENST00000569225 TRAPPC6BQ86SZ2 158 aa7.53□□□□□ -1.2
CHD9-219ENST00000569225 OR4M1Q8NGD0 313 aa7.53□□□□□ -1.2
CHD9-219ENST00000569225 SLC25A46Q96AG3 418 aa7.53□□□□□ -1.2
CHD9-219ENST00000569225 BEX2Q9BXY8 128 aa7.53□□□□□ -1.2
CHD9-219ENST00000569225 NAA50Q9GZZ1 169 aaKnown RBP7.53□□□□□ -1.2
CHD9-219ENST00000569225 LPAR5Q9H1C0 372 aa7.53□□□□□ -1.2
CHD9-219ENST00000569225 KCNK15Q9H427 330 aa7.53□□□□□ -1.2
CHD9-219ENST00000569225 NCOR1P1Q9H4R4 102 aa7.53□□□□□ -1.2
CHD9-219ENST00000569225 OR6C3Q9NZP0 311 aa7.53□□□□□ -1.2
CHD9-219ENST00000569225 ABRACLQ9P1F3 81 aa7.53□□□□□ -1.2
CHD9-219ENST00000569225 MED13LQ71F56 2210 aa7.52□□□□□ -1.2
CHD9-219ENST00000569225 ABCA1O95477 2261 aa7.52□□□□□ -1.21
CHD9-219ENST00000569225 MALRD1Q5VYJ5 2156 aa7.52□□□□□ -1.21
CHD9-219ENST00000569225 TMEM30CPA0ZSE6 113 aa7.52□□□□□ -1.21
CHD9-219ENST00000569225 ODAMA1E959 279 aa7.52□□□□□ -1.21
CHD9-219ENST00000569225 TOX4O94842 621 aa7.52□□□□□ -1.21
CHD9-219ENST00000569225 BLVRBP30043 206 aaPredicted RBP7.52□□□□□ -1.21
CHD9-219ENST00000569225 TGFBR1P36897 503 aa7.52□□□□□ -1.21
CHD9-219ENST00000569225 SRP14P37108 136 aaKnown RBP7.52□□□□□ -1.21
CHD9-219ENST00000569225 RORCP51449 518 aa7.52□□□□□ -1.21
CHD9-219ENST00000569225 AESQ08117 197 aa7.52□□□□□ -1.21
CHD9-219ENST00000569225 TMEM200BQ69YZ2 307 aa7.52□□□□□ -1.21
CHD9-219ENST00000569225 BPIFB2Q8N4F0 458 aa7.52□□□□□ -1.21
CHD9-219ENST00000569225 FAM89BQ8N5H3 189 aa7.52□□□□□ -1.21
CHD9-219ENST00000569225 AP3S1Q92572 193 aa7.52□□□□□ -1.21
CHD9-219ENST00000569225 KCTD12Q96CX2 325 aaKnown RBP7.52□□□□□ -1.21
CHD9-219ENST00000569225 WDFY2Q96P53 400 aa7.52□□□□□ -1.21
CHD9-219ENST00000569225 TMPRSS13Q9BYE2 586 aa7.52□□□□□ -1.21
CHD9-219ENST00000569225 DCSTAMPQ9H295 470 aa7.52□□□□□ -1.21
CHD9-219ENST00000569225 GAL3ST2Q9H3Q3 398 aa7.52□□□□□ -1.21
CHD9-219ENST00000569225 ETAA1Q9NY74 926 aa7.52□□□□□ -1.21
CHD9-219ENST00000569225 UBE2J1Q9Y385 318 aaPredicted RBP7.52□□□□□ -1.21
CHD9-219ENST00000569225 LINC00312Q9Y6C7 94 aa7.52□□□□□ -1.21
CHD9-219ENST00000569225 TEP1Q99973 2627 aaKnown RBP7.52□□□□□ -1.21
CHD9-219ENST00000569225 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.52□□□□□ -1.212e-8■□□□□ 10.8
CHD9-219ENST00000569225 MEIKINA0A087WXM9 373 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 A0A0B4J203 849 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 RBP4P02753 201 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 ZNF728P0DKX0 622 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 SNRPBP14678 240 aaKnown RBP7.51□□□□□ -1.21
CHD9-219ENST00000569225 CR1P17927 2039 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 ARF6P62330 175 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 ARL6IP1Q15041 203 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 CHRFAM7AQ494W8 412 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 SLC35E4Q6ICL7 350 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 ZNF565Q8N9K5 539 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 NANPQ8TBE9 248 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 LGALS14Q8TCE9 139 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 ACOT12Q8WYK0 555 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 PHF21AQ96BD5 680 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 ZNF714Q96N38 554 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 PCGF1Q9BSM1 259 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 ATG5Q9H1Y0 275 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 METTL8Q9H825 291 aaKnown RBP7.51□□□□□ -1.21
CHD9-219ENST00000569225 PLEKHJ1Q9NW61 149 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 ING3Q9NXR8 418 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 OPN4Q9UHM6 478 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 CCDC160A6NGH7 325 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 INAFM1C9JVW0 142 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 HAX1O00165 279 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 CHATP28329 748 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 SOX6P35712 828 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 GLIPR1P48060 266 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 VEGFCP49767 419 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 DYNC1I2Q13409 638 aaKnown RBP7.51□□□□□ -1.21
CHD9-219ENST00000569225 RSBN1Q5VWQ0 802 aaPredicted RBP7.51□□□□□ -1.21
CHD9-219ENST00000569225 NCR3LG1Q68D85 454 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 SIGIRRQ6IA17 410 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 PIP4P2Q8N4L2 257 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 TPRX1Q8N7U7 411 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 NDNFQ8TB73 568 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 CORO2AQ92828 525 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 UPRTQ96BW1 309 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 RAB3CQ96E17 227 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 COQ2Q96H96 371 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 NICN1Q9BSH3 213 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 SIRPDQ9H106 197 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 RAB9BQ9NP90 201 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 TAS2R3Q9NYW6 316 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 ZNF581Q9P0T4 197 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 KIF25Q9UIL4 384 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 HSF4Q9ULV5 492 aa7.51□□□□□ -1.21
CHD9-219ENST00000569225 NSD1Q96L73 2696 aaPredicted RBP7.51□□□□□ -1.21
CHD9-219ENST00000569225 ABCA2Q9BZC7 2435 aa7.5□□□□□ -1.21
CHD9-219ENST00000569225 UBE2QL1A1L167 161 aa7.5□□□□□ -1.21
CHD9-219ENST00000569225 SOCS1O15524 211 aa7.5□□□□□ -1.21
CHD9-219ENST00000569225 PAHP00439 452 aa7.5□□□□□ -1.21
CHD9-219ENST00000569225 GLP1RP43220 463 aa7.5□□□□□ -1.21
CHD9-219ENST00000569225 EFNB2P52799 333 aa7.5□□□□□ -1.21
CHD9-219ENST00000569225 MRPS15P82914 257 aaKnown RBP7.5□□□□□ -1.21
CHD9-219ENST00000569225 ZNF273Q14593 569 aa7.5□□□□□ -1.21
CHD9-219ENST00000569225 GPR157Q5UAW9 335 aa7.5□□□□□ -1.21
CHD9-219ENST00000569225 TRAT1Q6PIZ9 186 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms