RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 EPM2AB3EWF7 344 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 CLDN34H7C241 214 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 K7N7A8 449 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 PLPP1O14494 284 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 PRMT5O14744 637 aaPredicted RBP2.82□□□□□ -1.96
LIMA1-208ENST00000551691 TNFSF11O14788 317 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 SIVA1O15304 175 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 ERI3O43414 337 aaKnown RBP2.82□□□□□ -1.96
LIMA1-208ENST00000551691 EIF4E2O60573 245 aaKnown RBP2.82□□□□□ -1.96
LIMA1-208ENST00000551691 FKBP6O75344 327 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 IGHV2-5P01817 119 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 CATP04040 527 aaKnown RBP2.82□□□□□ -1.96
LIMA1-208ENST00000551691 CRYBA1P05813 215 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 ADRA2AP08913 450 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 GIPP09681 153 aaPredicted RBP2.82□□□□□ -1.96
LIMA1-208ENST00000551691 GGT1P19440 569 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 PRKACBP22694 351 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 COX7A1P24310 79 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 AQP1P29972 269 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 GPR6P46095 362 aaPredicted RBP2.82□□□□□ -1.96
LIMA1-208ENST00000551691 RAB7AP51149 207 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 RORCP51449 518 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 IDH3GP51553 393 aaPredicted RBP2.82□□□□□ -1.96
LIMA1-208ENST00000551691 CCNG1P51959 295 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 CRISP1P54107 249 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 TAS2R19P59542 299 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 SNRPD2P62316 118 aaKnown RBP2.82□□□□□ -1.96
LIMA1-208ENST00000551691 TGFBR3Q03167 851 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 DEFB112Q30KQ8 113 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 TIMM23BQ5SRD1 257 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 CEP85LQ5SZL2 805 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 ERICH5Q6P6B1 374 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 AGTRAPQ6RW13 159 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 UNQ9370/PRO34162Q6UXP9 181 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 OAFQ86UD1 273 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 APRG1Q8IVJ8 170 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 WDFY1Q8IWB7 410 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 ZNF440Q8IYI8 595 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 PRELID2Q8N945 189 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 WDR31Q8NA23 367 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 DRAXINQ8NBI3 349 aaPredicted RBP2.82□□□□□ -1.96
LIMA1-208ENST00000551691 FBXO36Q8NEA4 188 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 OR4M2Q8NGB6 313 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 OR8K1Q8NGG5 319 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 OR51L1Q8NGJ5 315 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 OR4A15Q8NGL6 344 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 IL22RA2Q969J5 263 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 ISOC2Q96AB3 205 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 EEF1AKMT3Q96AZ1 226 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 MS4A6EQ96DS6 147 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 SNF8Q96H20 258 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 DOK1Q99704 481 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 NAPGQ99747 312 aaPredicted RBP2.82□□□□□ -1.96
LIMA1-208ENST00000551691 KCNS3Q9BQ31 491 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 NICN1Q9BSH3 213 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 RNF126Q9BV68 326 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 OSBPL11Q9BXB4 747 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 OSBPL10Q9BXB5 764 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 RAB1BQ9H0U4 201 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 VCX3AQ9NNX9 186 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 MYOZ1Q9NP98 299 aaPredicted RBP2.82□□□□□ -1.96
LIMA1-208ENST00000551691 AIG1Q9NVV5 245 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 SIGLEC9Q9Y336 463 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 HYOU1Q9Y4L1 999 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 KPTNQ9Y664 436 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 TET2Q6N021 2002 aaPredicted RBP2.81□□□□□ -1.96
LIMA1-208ENST00000551691 MUC4Q99102 2169 aa2.81□□□□□ -1.96
LIMA1-208ENST00000551691 IGKV3D-15A0A087WSY6 115 aa2.81□□□□□ -1.96
LIMA1-208ENST00000551691 IGHV3-15A0A0B4J1V0 119 aa2.81□□□□□ -1.96
LIMA1-208ENST00000551691 ZNF816-ZNF321PA0A0X1KG74 233 aa2.81□□□□□ -1.96
LIMA1-208ENST00000551691 A0A1B0GW55 424 aa2.81□□□□□ -1.96
LIMA1-208ENST00000551691 OR5H1A6NKK0 313 aa2.81□□□□□ -1.96
LIMA1-208ENST00000551691 HSBP1L1C9JCN9 74 aa2.81□□□□□ -1.96
LIMA1-208ENST00000551691 TRAPPC2LH3BP13 241 aa2.81□□□□□ -1.96
LIMA1-208ENST00000551691 XRCC2O43543 280 aa2.81□□□□□ -1.96
LIMA1-208ENST00000551691 CST8O60676 142 aa2.81□□□□□ -1.96
LIMA1-208ENST00000551691 SCELO95171 688 aa2.81□□□□□ -1.96
LIMA1-208ENST00000551691 SERPINE2P07093 398 aa2.81□□□□□ -1.96
LIMA1-208ENST00000551691 SERPINA6P08185 405 aa2.81□□□□□ -1.96
LIMA1-208ENST00000551691 DUX4L2P0CJ85 424 aa2.81□□□□□ -1.96
LIMA1-208ENST00000551691 DUX4L3P0CJ86 424 aa2.81□□□□□ -1.96
LIMA1-208ENST00000551691 DUX4L4P0CJ87 422 aa2.81□□□□□ -1.96
LIMA1-208ENST00000551691 DUX4L5P0CJ88 424 aa2.81□□□□□ -1.96
LIMA1-208ENST00000551691 DUX4L6P0CJ89 424 aa2.81□□□□□ -1.96
LIMA1-208ENST00000551691 DUX4L7P0CJ90 424 aa2.81□□□□□ -1.96
LIMA1-208ENST00000551691 NR2C1P13056 603 aa2.81□□□□□ -1.96
LIMA1-208ENST00000551691 SHC1P29353 583 aa2.81□□□□□ -1.96
LIMA1-208ENST00000551691 MDH2P40926 338 aaKnown RBP2.81□□□□□ -1.96
LIMA1-208ENST00000551691 PPP1R2P41236 205 aa2.81□□□□□ -1.96
LIMA1-208ENST00000551691 UBE2MP61081 183 aaKnown RBP2.81□□□□□ -1.96
LIMA1-208ENST00000551691 SKP1P63208 163 aa2.81□□□□□ -1.96
LIMA1-208ENST00000551691 CRADDP78560 199 aa2.81□□□□□ -1.96
LIMA1-208ENST00000551691 ZNF92Q03936 586 aa2.81□□□□□ -1.96
LIMA1-208ENST00000551691 CDH17Q12864 832 aa2.81□□□□□ -1.96
LIMA1-208ENST00000551691 STX5Q13190 355 aa2.81□□□□□ -1.96
LIMA1-208ENST00000551691 ZBED5Q49AG3 693 aa2.81□□□□□ -1.96
LIMA1-208ENST00000551691 C1orf100Q5SVJ3 147 aa2.81□□□□□ -1.96
LIMA1-208ENST00000551691 CCNJQ5T5M9 372 aa2.81□□□□□ -1.96
LIMA1-208ENST00000551691 SAXO2Q658L1 398 aa2.81□□□□□ -1.96
LIMA1-208ENST00000551691 ZNF470Q6ECI4 717 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms