RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 SLC35E3Q7Z769 313 aa5.51□□□□□ -1.53
CLCN3-204ENST00000504131 CT55Q8WUE5 264 aa5.51□□□□□ -1.53
CLCN3-204ENST00000504131 SUSD6Q92537 303 aa5.51□□□□□ -1.53
CLCN3-204ENST00000504131 NEIL1Q96FI4 390 aaPredicted RBP5.51□□□□□ -1.53
CLCN3-204ENST00000504131 PGLYRP2Q96PD5 576 aa5.51□□□□□ -1.53
CLCN3-204ENST00000504131 ZNF587Q96SQ5 575 aaPredicted RBP5.51□□□□□ -1.53
CLCN3-204ENST00000504131 SMIM7Q9BQ49 75 aa5.51□□□□□ -1.53
CLCN3-204ENST00000504131 DUSP23Q9BVJ7 150 aa5.51□□□□□ -1.53
CLCN3-204ENST00000504131 CDH20Q9HBT6 801 aa5.51□□□□□ -1.53
CLCN3-204ENST00000504131 FBLN5Q9UBX5 448 aa5.51□□□□□ -1.53
CLCN3-204ENST00000504131 FZD1Q9UP38 647 aa5.51□□□□□ -1.53
CLCN3-204ENST00000504131 hCG_1818297A0A087WSY0 165 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 A8MT66 165 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 FABP5P3A8MUU1 101 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 IGHV2-5P01817 119 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 PSMB5P28074 263 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 LGALS7P47929 136 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 VGLL4Q14135 290 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 TMEM215Q68D42 235 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 INO80CQ6PI98 192 aaPredicted RBP5.5□□□□□ -1.53
CLCN3-204ENST00000504131 S1PR3Q99500 378 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 KXD1Q9BQD3 176 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 MS4A6AQ9H2W1 248 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 NTNG1Q9Y2I2 539 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 FLVCR1Q9Y5Y0 555 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 SYNGR1O43759 233 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 LIMS3P0CW19 117 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 LIMS4P0CW20 117 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 SNHG28P0DPA3 235 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 LYL1P12980 280 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 EDNRAP25101 427 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 GPR183P32249 361 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 THBS2P35442 1172 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 GPR6P46095 362 aaPredicted RBP5.5□□□□□ -1.53
CLCN3-204ENST00000504131 ZNF121P58317 390 aaPredicted RBP5.5□□□□□ -1.53
CLCN3-204ENST00000504131 LILRA4P59901 499 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 ARSIQ5FYB1 569 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 PARM1Q6UWI2 310 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 DLEU7Q6UYE1 221 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 KLHDC8AQ8IYD2 350 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 FGFRL1Q8N441 504 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 TM4SF19Q96DZ7 209 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 PRAP1Q96NZ9 151 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 PDCD2LQ9BRP1 358 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 UPK3AO75631 287 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 REG1AP05451 166 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 SLC25A4P12235 298 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 ACP5P13686 325 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 SDC1P18827 310 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 ALOX5APP20292 161 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 PAX9P55771 341 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 Q1RN00 199 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 HOXB13Q92826 284 aaPredicted RBP5.5□□□□□ -1.53
CLCN3-204ENST00000504131 GNPNAT1Q96EK6 184 aaPredicted RBP5.5□□□□□ -1.53
CLCN3-204ENST00000504131 GGTLC1Q9BX51 225 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 MT-CO3P00414 261 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 ZNF93P35789 620 aaPredicted RBP5.5□□□□□ -1.53
CLCN3-204ENST00000504131 EFNA5P52803 228 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 ZNF77Q15935 545 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 SPIN2AQ99865 258 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 SPIN2BQ9BPZ2 258 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 EGLN3Q9H6Z9 239 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 SPHK2Q9NRA0 654 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 CHST2Q9Y4C5 530 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 MYH6P13533 1939 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 M0R082 166 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 NXPH3O95157 252 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 ATP6V0CP27449 155 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 IL10RBQ08334 325 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 C3AR1Q16581 482 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 RAB6CQ53S08 254 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 SLC25A53Q5H9E4 307 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 TRAPPC6BQ86SZ2 158 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 HAPLN4Q86UW8 402 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 RNF175Q8N4F7 328 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 ZNF417Q8TAU3 575 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 LINC00597Q9H2U6 94 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 ST20Q9HBF5 79 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 TAS2R5Q9NYW4 299 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 V9GYH0 126 aa5.5□□□□□ -1.53
CLCN3-204ENST00000504131 TRAV36DV7A0A075B6V5 113 aa5.49□□□□□ -1.53
CLCN3-204ENST00000504131 TNFSF11O14788 317 aa5.49□□□□□ -1.53
CLCN3-204ENST00000504131 EML2O95834 649 aa5.49□□□□□ -1.53
CLCN3-204ENST00000504131 FAM106CPP0CH98 169 aa5.49□□□□□ -1.53
CLCN3-204ENST00000504131 PRTN3P24158 256 aa5.49□□□□□ -1.53
CLCN3-204ENST00000504131 TIMP3P35625 211 aa5.49□□□□□ -1.53
CLCN3-204ENST00000504131 UBE2L3P68036 154 aaKnown RBP5.49□□□□□ -1.53
CLCN3-204ENST00000504131 PTPRNQ16849 979 aa5.49□□□□□ -1.53
CLCN3-204ENST00000504131 FAM106AQ4KMX7 169 aa5.49□□□□□ -1.53
CLCN3-204ENST00000504131 GJC3Q8NFK1 279 aa5.49□□□□□ -1.53
CLCN3-204ENST00000504131 OR5K2Q8NHB8 316 aa5.49□□□□□ -1.53
CLCN3-204ENST00000504131 HMGCLL1Q8TB92 370 aa5.49□□□□□ -1.53
CLCN3-204ENST00000504131 SHKBP1Q8TBC3 707 aa5.49□□□□□ -1.53
CLCN3-204ENST00000504131 CD99L2Q8TCZ2 262 aa5.49□□□□□ -1.53
CLCN3-204ENST00000504131 PIGTQ969N2 578 aa5.49□□□□□ -1.53
CLCN3-204ENST00000504131 PRADC1Q9BSG0 188 aa5.49□□□□□ -1.53
CLCN3-204ENST00000504131 LRRC61Q9BV99 259 aa5.49□□□□□ -1.53
CLCN3-204ENST00000504131 PHF7Q9BWX1 381 aaPredicted RBP5.49□□□□□ -1.53
CLCN3-204ENST00000504131 NMNAT2Q9BZQ4 307 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms