RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 NLKQ9UBE8 527 aa10.1□□□□□ -0.79
UPF3A-210ENST00000493727 OR14J1Q9UGF5 321 aa10.1□□□□□ -0.79
UPF3A-210ENST00000493727 ST3GAL6Q9Y274 331 aa10.1□□□□□ -0.79
UPF3A-210ENST00000493727 A3GALT2U3KPV4 340 aa10.1□□□□□ -0.79
UPF3A-210ENST00000493727 DOCK11Q5JSL3 2073 aa10.1□□□□□ -0.79
UPF3A-210ENST00000493727 PPIAL4EA0A075B759 164 aa10.09□□□□□ -0.79
UPF3A-210ENST00000493727 TRAV38-1A0A0B4J264 116 aa10.09□□□□□ -0.79
UPF3A-210ENST00000493727 A0A0G2JMP0 313 aa10.09□□□□□ -0.79
UPF3A-210ENST00000493727 A0A0X1KG70 313 aa10.09□□□□□ -0.79
UPF3A-210ENST00000493727 OOEPA6NGQ2 149 aa10.09□□□□□ -0.79
UPF3A-210ENST00000493727 PPIAL4DF5H284 164 aa10.09□□□□□ -0.79
UPF3A-210ENST00000493727 J3QLI3 93 aa10.09□□□□□ -0.79
UPF3A-210ENST00000493727 CTDSP2O14595 271 aa10.09□□□□□ -0.79
UPF3A-210ENST00000493727 LDLRAD4O15165 306 aa10.09□□□□□ -0.79
UPF3A-210ENST00000493727 KNG1P01042 644 aa10.09□□□□□ -0.79
UPF3A-210ENST00000493727 PPIAL4FP0DN26 164 aa10.09□□□□□ -0.79
UPF3A-210ENST00000493727 GATA3P23771 443 aa10.09□□□□□ -0.79
UPF3A-210ENST00000493727 RBMXP38159 391 aaKnown RBP10.09□□□□□ -0.79
UPF3A-210ENST00000493727 EFNB2P52799 333 aa10.09□□□□□ -0.79
UPF3A-210ENST00000493727 RBM11P57052 281 aaKnown RBP10.09□□□□□ -0.79
UPF3A-210ENST00000493727 ERVK11-1P61568 191 aa10.09□□□□□ -0.79
UPF3A-210ENST00000493727 RPS27AP62979 156 aaKnown RBP10.09□□□□□ -0.79
UPF3A-210ENST00000493727 HOXA4Q00056 320 aaPredicted RBP10.09□□□□□ -0.79
UPF3A-210ENST00000493727 SCN1BQ07699 218 aa10.09□□□□□ -0.79
UPF3A-210ENST00000493727 PLA2G7Q13093 441 aa10.09□□□□□ -0.79
UPF3A-210ENST00000493727 IL13RA2Q14627 380 aa10.09□□□□□ -0.79
UPF3A-210ENST00000493727 KCNJ8Q15842 424 aa10.09□□□□□ -0.79
UPF3A-210ENST00000493727 MICBQ29980 383 aa10.09□□□□□ -0.79
UPF3A-210ENST00000493727 SFRP4Q6FHJ7 346 aaPredicted RBP10.09□□□□□ -0.79
UPF3A-210ENST00000493727 LAX1Q8IWV1 398 aa10.09□□□□□ -0.79
UPF3A-210ENST00000493727 CHST4Q8NCG5 386 aa10.09□□□□□ -0.79
UPF3A-210ENST00000493727 C19orf18Q8NEA5 215 aa10.09□□□□□ -0.79
UPF3A-210ENST00000493727 OR4M2Q8NGB6 313 aa10.09□□□□□ -0.79
UPF3A-210ENST00000493727 OR56B1Q8NGI3 324 aa10.09□□□□□ -0.79
UPF3A-210ENST00000493727 RAB40AQ8WXH6 277 aa10.09□□□□□ -0.79
UPF3A-210ENST00000493727 PTX4Q96A99 478 aa10.09□□□□□ -0.79
UPF3A-210ENST00000493727 HES4Q9HCC6 221 aa10.09□□□□□ -0.79
UPF3A-210ENST00000493727 DIABLOQ9NR28 239 aa10.09□□□□□ -0.79
UPF3A-210ENST00000493727 IL36RNQ9UBH0 155 aa10.09□□□□□ -0.79
UPF3A-210ENST00000493727 PPIAL4AQ9Y536 164 aa10.09□□□□□ -0.79
UPF3A-210ENST00000493727 ARHGAP32A7KAX9 2087 aa10.08□□□□□ -0.8
UPF3A-210ENST00000493727 NKX6-3A6NJ46 265 aa10.08□□□□□ -0.8
UPF3A-210ENST00000493727 LGALS8O00214 317 aa10.08□□□□□ -0.8
UPF3A-210ENST00000493727 GEMIN2O14893 280 aaKnown RBP10.08□□□□□ -0.8
UPF3A-210ENST00000493727 SCGNO76038 276 aa10.08□□□□□ -0.8
UPF3A-210ENST00000493727 OR7C1O76099 320 aaPredicted RBP10.08□□□□□ -0.8
UPF3A-210ENST00000493727 HAND1O96004 215 aa10.08□□□□□ -0.8
UPF3A-210ENST00000493727 LHBP01229 141 aa10.08□□□□□ -0.8
UPF3A-210ENST00000493727 APOA1P02647 267 aa10.08□□□□□ -0.8
UPF3A-210ENST00000493727 EIF4EP06730 217 aaKnown RBP10.08□□□□□ -0.8
UPF3A-210ENST00000493727 ZNF44P15621 663 aa10.08□□□□□ -0.8
UPF3A-210ENST00000493727 DUSP1P28562 367 aa10.08□□□□□ -0.8
UPF3A-210ENST00000493727 GABRA2P47869 451 aa10.08□□□□□ -0.8
UPF3A-210ENST00000493727 PITPNBP48739 271 aa10.08□□□□□ -0.8
UPF3A-210ENST00000493727 VEGFCP49767 419 aa10.08□□□□□ -0.8
UPF3A-210ENST00000493727 BTG1P62324 171 aa10.08□□□□□ -0.8
UPF3A-210ENST00000493727 SRSF3P84103 164 aaKnown RBP10.08□□□□□ -0.8
UPF3A-210ENST00000493727 TAF9Q16594 264 aa10.08□□□□□ -0.8
UPF3A-210ENST00000493727 SPIN3Q5JUX0 258 aa10.08□□□□□ -0.8
UPF3A-210ENST00000493727 FAHD2BQ6P2I3 314 aaPredicted RBP10.08□□□□□ -0.8
UPF3A-210ENST00000493727 LINC00596Q86U02 117 aa10.08□□□□□ -0.8
UPF3A-210ENST00000493727 LRRC28Q86X40 367 aaPredicted RBP10.08□□□□□ -0.8
UPF3A-210ENST00000493727 FAM90A1Q86YD7 464 aa10.08□□□□□ -0.8
UPF3A-210ENST00000493727 KRTAP19-1Q8IUB9 90 aa10.08□□□□□ -0.8
UPF3A-210ENST00000493727 CMTM4Q8IZR5 234 aa10.08□□□□□ -0.8
UPF3A-210ENST00000493727 SLC25A38Q96DW6 304 aa10.08□□□□□ -0.8
UPF3A-210ENST00000493727 SEH1LQ96EE3 360 aa10.08□□□□□ -0.8
UPF3A-210ENST00000493727 S100A16Q96FQ6 103 aaKnown RBP10.08□□□□□ -0.8
UPF3A-210ENST00000493727 FAHD2AQ96GK7 314 aa10.08□□□□□ -0.8
UPF3A-210ENST00000493727 DIRAS2Q96HU8 199 aa10.08□□□□□ -0.8
UPF3A-210ENST00000493727 CMTM3Q96MX0 182 aa10.08□□□□□ -0.8
UPF3A-210ENST00000493727 NEDD4LQ96PU5 975 aa10.08□□□□□ -0.8
UPF3A-210ENST00000493727 NICN1Q9BSH3 213 aa10.08□□□□□ -0.8
UPF3A-210ENST00000493727 LPAR5Q9H1C0 372 aa10.08□□□□□ -0.8
UPF3A-210ENST00000493727 EXTL2Q9UBQ6 330 aa10.08□□□□□ -0.8
UPF3A-210ENST00000493727 WIPI2Q9Y4P8 454 aa10.08□□□□□ -0.8
UPF3A-210ENST00000493727 KRTAP9-6A0A140TA67 174 aa10.07□□□□□ -0.8
UPF3A-210ENST00000493727 RFPL4AA6NLU0 287 aa10.07□□□□□ -0.8
UPF3A-210ENST00000493727 OR2AT4A6NND4 320 aa10.07□□□□□ -0.8
UPF3A-210ENST00000493727 RFPL4AL1F8VTS6 287 aa10.07□□□□□ -0.8
UPF3A-210ENST00000493727 H3BUI4 141 aa10.07□□□□□ -0.8
UPF3A-210ENST00000493727 TRIM77I1YAP6 450 aa10.07□□□□□ -0.8
UPF3A-210ENST00000493727 SIRPB1O00241 398 aa10.07□□□□□ -0.8
UPF3A-210ENST00000493727 SH2D1BO14796 132 aa10.07□□□□□ -0.8
UPF3A-210ENST00000493727 DEGS1O15121 323 aa10.07□□□□□ -0.8
UPF3A-210ENST00000493727 TSPAN15O95858 294 aa10.07□□□□□ -0.8
UPF3A-210ENST00000493727 IGHV2-5P01817 119 aa10.07□□□□□ -0.8
UPF3A-210ENST00000493727 MED14OSP0DP75 135 aa10.07□□□□□ -0.8
UPF3A-210ENST00000493727 MUC1P15941 1255 aaPredicted RBP10.07□□□□□ -0.8
UPF3A-210ENST00000493727 ELK1P19419 428 aa10.07□□□□□ -0.8
UPF3A-210ENST00000493727 CEBPDP49716 269 aaPredicted RBP10.07□□□□□ -0.8
UPF3A-210ENST00000493727 PDCD1Q15116 288 aa10.07□□□□□ -0.8
UPF3A-210ENST00000493727 ZNF124Q15973 351 aa10.07□□□□□ -0.8
UPF3A-210ENST00000493727 MPV17LQ2QL34 196 aa10.07□□□□□ -0.8
UPF3A-210ENST00000493727 NHLRC3Q5JS37 347 aa10.07□□□□□ -0.8
UPF3A-210ENST00000493727 ATAD3CQ5T2N8 411 aa10.07□□□□□ -0.8
UPF3A-210ENST00000493727 AVPI1Q5T686 147 aa10.07□□□□□ -0.8
UPF3A-210ENST00000493727 RAB12Q6IQ22 244 aa10.07□□□□□ -0.8
UPF3A-210ENST00000493727 CNIH2Q6PI25 160 aa10.07□□□□□ -0.8
UPF3A-210ENST00000493727 METAP1DQ6UB28 335 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 215.8 ms